Displaying 401 - 500 of 590
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Powlesland, A. S., Hitchen, P. G., Parry, S., Graham, S. A., Barrio, M. M., Elola, M. T., Mordoh, J., Dell, A., Drickamer, K., & Taylor, M. E. (2009). Targeted glycoproteomic identification of cancer cell glycosylation. Glycobiology, 9, 899-909. doi:10.1093/glycob/cwp065.
Abstract
GalMBP is a fragment of serum mannose-binding protein that has been modified to create a probe for galactose-containing ligands. Glycan array screening demonstrated that the carbohydrate-recognition domain of GalMBP selectively binds common groups of tumor-associated glycans, including Lewis-type structures and T antigen, suggesting that engineered glycan-binding proteins such as GalMBP represent novel tools for the characterization of glycoproteins bearing tumor-associated glycans. Blotting of cell extracts and membranes from MCF7 breast cancer cells with radiolabeled GalMBP was used to demonstrate that it binds to a selected set of high molecular weight glycoproteins that could be purified from MCF7 cells on an affinity column constructed with GalMBP. Proteomic and glycomic analysis of these glycoproteins by mass spectrometry showed that they are forms of CD98hc that bear glycans displaying heavily fucosylated termini, including Lewis(x) and Lewis(y) structures. The pool of ligands was found to include the target ligands for anti-CD15 antibodies, which are commonly used to detect Lewis(x) antigen on tumors, and for the endothelial scavenger receptor C-type lectin, which may be involved in tumor metastasis through interactions with this antigen. A survey of additional breast cancer cell lines reveals that there is wide variation in the types of glycosylation that lead to binding of GalMBP. Higher levels of binding are associated either with the presence of outer-arm fucosylated structures carried on a variety of different cell surface glycoproteins or with the presence of high levels of the mucin MUC1 bearing T antigen.Additional information
Powlesland_2009_Suppl_Mat.pdf -
Protopapas, A., & Gerakaki, S. (2009). Development of processing stress diacritics in reading Greek. Scientific Studies of Reading, 13(6), 453-483. doi:10.1080/10888430903034788.
Abstract
In Greek orthography, stress position is marked with a diacritic. We investigated the developmental course of processing the stress diacritic in Grades 2 to 4. Ninety children read 108 pseudowords presented without or with a diacritic either in the same or in a different position relative to the source word. Half of the pseudowords resembled the words they were derived from. Results showed that lexical sources of stress assignment were active in Grade 2 and remained stronger than the diacritic through Grade 4. The effect of the diacritic increased more rapidly and approached the lexical effect with increasing grade. In a second experiment, 90 children read 54 words and 54 pseudowords. The pattern of results for words was similar to that for nonwords suggesting that findings regarding stress assignment using nonwords may generalize to word reading. Decoding of the diacritic does not appear to be the preferred option for developing readers. -
Pylkkänen, L., Martin, A. E., McElree, B., & Smart, A. (2009). The Anterior Midline Field: Coercion or decision making? Brain and Language, 108(3), 184-190. doi:10.1016/j.bandl.2008.06.006.
Abstract
To study the neural bases of semantic composition in language processing without confounds from syntactic composition, recent magnetoencephalography (MEG) studies have investigated the processing of constructions that exhibit some type of syntax-semantics mismatch. The most studied case of such a mismatch is complement coercion; expressions such as the author began the book, where an entity-denoting noun phrase is coerced into an eventive meaning in order to match the semantic properties of the event-selecting verb (e.g., ‘the author began reading/writing the book’). These expressions have been found to elicit increased activity in the Anterior Midline Field (AMF), an MEG component elicited at frontomedial sensors at ∼400 ms after the onset of the coercing noun [Pylkkänen, L., & McElree, B. (2007). An MEG study of silent meaning. Journal of Cognitive Neuroscience, 19, 11]. Thus, the AMF constitutes a potential neural correlate of coercion. However, the AMF was generated in ventromedial prefrontal regions, which are heavily associated with decision-making. This raises the possibility that, instead of semantic processing, the AMF effect may have been related to the experimental task, which was a sensicality judgment. We tested this hypothesis by assessing the effect of coercion when subjects were simply reading for comprehension, without a decision-task. Additionally, we investigated coercion in an adjectival rather than a verbal environment to further generalize the findings. Our results show that an AMF effect of coercion is elicited without a decision-task and that the effect also extends to this novel syntactic environment. We conclude that in addition to its role in non-linguistic higher cognition, ventromedial prefrontal regions contribute to the resolution of syntax-semantics mismatches in language processing. -
Qin, S., Rijpkema, M., Tendolkar, I., Piekema, C., Hermans, E. J., Binder, M., Petersson, K. M., Luo, J., & Fernández, G. (2009). Dissecting medial temporal lobe contributions to item and associative memory formation. NeuroImage, 46, 874-881. doi:10.1016/j.neuroimage.2009.02.039.
Abstract
A fundamental and intensively discussed question is whether medial temporal lobe (MTL) processes that lead to non-associative item memories differ in their anatomical substrate from processes underlying associative memory formation. Using event-related functional magnetic resonance imaging, we implemented a novel design to dissociate brain activity related to item and associative memory formation not only by subsequent memory performance and anatomy but also in time, because the two constituents of each pair to be memorized were presented sequentially with an intra-pair delay of several seconds. Furthermore, the design enabled us to reduce potential differences in memory strength between item and associative memory by increasing task difficulty in the item recognition memory test. Confidence ratings for correct item recognition for both constituents did not differ between trials in which only item memory was correct and trials in which item and associative memory were correct. Specific subsequent memory analyses for item and associative memory formation revealed brain activity that appears selectively related to item memory formation in the posterior inferior temporal, posterior parahippocampal, and perirhinal cortices. In contrast, hippocampal and inferior prefrontal activity predicted successful retrieval of newly formed inter-item associations. Our findings therefore suggest that different MTL subregions indeed play distinct roles in the formation of item memory and inter-item associative memory as expected by several dual process models of the MTL memory system. -
Quaresima, A., Fitz, H., Duarte, R., Van den Broek, D., Hagoort, P., & Petersson, K. M. (2023). The Tripod neuron: A minimal structural reduction of the dendritic tree. The Journal of Physiology, 601(15), 3007-3437. doi:10.1113/JP283399.
Abstract
Neuron models with explicit dendritic dynamics have shed light on mechanisms for coincidence detection, pathway selection and temporal filtering. However, it is still unclear which morphological and physiological features are required to capture these phenomena. In this work, we introduce the Tripod neuron model and propose a minimal structural reduction of the dendritic tree that is able to reproduce these computations. The Tripod is a three-compartment model consisting of two segregated passive dendrites and a somatic compartment modelled as an adaptive, exponential integrate-and-fire neuron. It incorporates dendritic geometry, membrane physiology and receptor dynamics as measured in human pyramidal cells. We characterize the response of the Tripod to glutamatergic and GABAergic inputs and identify parameters that support supra-linear integration, coincidence-detection and pathway-specific gating through shunting inhibition. Following NMDA spikes, the Tripod neuron generates plateau potentials whose duration depends on the dendritic length and the strength of synaptic input. When fitted with distal compartments, the Tripod encodes previous activity into a dendritic depolarized state. This dendritic memory allows the neuron to perform temporal binding, and we show that it solves transition and sequence detection tasks on which a single-compartment model fails. Thus, the Tripod can account for dendritic computations previously explained only with more detailed neuron models or neural networks. Due to its simplicity, the Tripod neuron can be used efficiently in simulations of larger cortical circuits. -
Raghavan, R., Raviv, L., & Peeters, D. (2023). What's your point? Insights from virtual reality on the relation between intention and action in the production of pointing gestures. Cognition, 240: 105581. doi:10.1016/j.cognition.2023.105581.
Abstract
Human communication involves the process of translating intentions into communicative actions. But how exactly do our intentions surface in the visible communicative behavior we display? Here we focus on pointing gestures, a fundamental building block of everyday communication, and investigate whether and how different types of underlying intent modulate the kinematics of the pointing hand and the brain activity preceding the gestural movement. In a dynamic virtual reality environment, participants pointed at a referent to either share attention with their addressee, inform their addressee, or get their addressee to perform an action. Behaviorally, it was observed that these different underlying intentions modulated how long participants kept their arm and finger still, both prior to starting the movement and when keeping their pointing hand in apex position. In early planning stages, a neurophysiological distinction was observed between a gesture that is used to share attitudes and knowledge with another person versus a gesture that mainly uses that person as a means to perform an action. Together, these findings suggest that our intentions influence our actions from the earliest neurophysiological planning stages to the kinematic endpoint of the movement itself. -
Raimondi, T., Di Panfilo, G., Pasquali, M., Zarantonello, M., Favaro, L., Savini, T., Gamba, M., & Ravignani, A. (2023). Isochrony and rhythmic interaction in ape duetting. Proceedings of the Royal Society B: Biological Sciences, 290: 20222244. doi:10.1098/rspb.2022.2244.
Abstract
How did rhythm originate in humans, and other species? One cross-cultural universal, frequently found in human music, is isochrony: when note onsets repeat regularly like the ticking of a clock. Another universal consists in synchrony (e.g. when individuals coordinate their notes so that they are sung at the same time). An approach to biomusicology focuses on similarities and differences across species, trying to build phylogenies of musical traits. Here we test for the presence of, and a link between, isochrony and synchrony in a non-human animal. We focus on the songs of one of the few singing primates, the lar gibbon (Hylobates lar), extracting temporal features from their solo songs and duets. We show that another ape exhibits one rhythmic feature at the core of human musicality: isochrony. We show that an enhanced call rate overall boosts isochrony, suggesting that respiratory physiological constraints play a role in determining the song's rhythmic structure. However, call rate alone cannot explain the flexible isochrony we witness. Isochrony is plastic and modulated depending on the context of emission: gibbons are more isochronous when duetting than singing solo. We present evidence for rhythmic interaction: we find statistical causality between one individual's note onsets and the co-singer's onsets, and a higher than chance degree of synchrony in the duets. Finally, we find a sex-specific trade-off between individual isochrony and synchrony. Gibbon's plasticity for isochrony and rhythmic overlap may suggest a potential shared selective pressure for interactive vocal displays in singing primates. This pressure may have convergently shaped human and gibbon musicality while acting on a common neural primate substrate. Beyond humans, singing primates are promising models to understand how music and, specifically, a sense of rhythm originated in the primate phylogeny. -
Ramus, F., & Fisher, S. E. (2009). Genetics of language. In M. S. Gazzaniga (
Ed. ), The cognitive neurosciences, 4th ed. (pp. 855-871). Cambridge, MA: MIT Press.Abstract
It has long been hypothesised that the human faculty to acquire a language is in some way encoded in our genetic program. However, only recently has genetic evidence been available to begin to substantiate the presumed genetic basis of language. Here we review the first data from molecular genetic studies showing association between gene variants and language disorders (specific language impairment, speech sound disorder, developmental dyslexia), we discuss the biological function of these genes, and we further speculate on the more general question of how the human genome builds a brain that can learn a language. -
Rapold, C. J., & Zaugg-Coretti, S. (2009). Exploring the periphery of the central Ethiopian Linguistic area: Data from Yemsa and Benchnon. In J. Crass, & R. Meyer (
Eds. ), Language contact and language change in Ethiopia (pp. 59-81). Köln: Köppe. -
Rasenberg, M. (2023). Mutual understanding from a multimodal and interactional perspective. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Rasenberg, M., Amha, A., Coler, M., van Koppen, M., van Miltenburg, E., de Rijk, L., Stommel, W., & Dingemanse, M. (2023). Reimagining language: Towards a better understanding of language by including our interactions with non-humans. Linguistics in the Netherlands, 40, 309-317. doi:10.1075/avt.00095.ras.
Abstract
What is language and who or what can be said to have it? In this essay we consider this question in the context of interactions with non-humans, specifically: animals and computers. While perhaps an odd pairing at first glance, here we argue that these domains can offer contrasting perspectives through which we can explore and reimagine language. The interactions between humans and animals, as well as between humans and computers, reveal both the essence and the boundaries of language: from examining the role of sequence and contingency in human-animal interaction, to unravelling the challenges of natural interactions with “smart” speakers and language models. By bringing together disparate fields around foundational questions, we push the boundaries of linguistic inquiry and uncover new insights into what language is and how it functions in diverse non-humanexclusive contexts. -
Ravignani, A., & Herbst, C. T. (2023). Voices in the ocean: Toothed whales evolved a third way of making sounds similar to that of land mammals and birds. Science, 379(6635), 881-882. doi:10.1126/science.adg5256.
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Raviv, L., & Kirby, S. (2023). Self domestication and the cultural evolution of language. In J. J. Tehrani, J. Kendal, & R. Kendal (
Eds. ), The Oxford Handbook of Cultural Evolution. Oxford: Oxford University Press. doi:10.1093/oxfordhb/9780198869252.013.60.Abstract
The structural design features of human language emerge in the process of cultural evolution, shaping languages over the course of communication, learning, and transmission. What role does this leave biological evolution? This chapter highlights the biological bases and preconditions that underlie the particular type of prosocial behaviours and cognitive inference abilities that are required for languages to emerge via cultural evolution to begin with. -
Raviv, L., Jacobson, S. L., Plotnik, J. M., Bowman, J., Lynch, V., & Benítez-Burraco, A. (2023). Elephants as an animal model for self-domestication. Proceedings of the National Academy of Sciences of the United States of America, 120(15): e2208607120. doi:10.1073/pnas.2208607120.
Abstract
Humans are unique in their sophisticated culture and societal structures, their complex languages, and their extensive tool use. According to the human self-domestication hypothesis, this unique set of traits may be the result of an evolutionary process of self-induced domestication, in which humans evolved to be less aggressive and more cooperative. However, the only other species that has been argued to be self-domesticated besides humans so far is bonobos, resulting in a narrow scope for investigating this theory limited to the primate order. Here, we propose an animal model for studying self-domestication: the elephant. First, we support our hypothesis with an extensive cross-species comparison, which suggests that elephants indeed exhibit many of the features associated with self-domestication (e.g., reduced aggression, increased prosociality, extended juvenile period, increased playfulness, socially regulated cortisol levels, and complex vocal behavior). Next, we present genetic evidence to reinforce our proposal, showing that genes positively selected in elephants are enriched in pathways associated with domestication traits and include several candidate genes previously associated with domestication. We also discuss several explanations for what may have triggered a self-domestication process in the elephant lineage. Our findings support the idea that elephants, like humans and bonobos, may be self-domesticated. Since the most recent common ancestor of humans and elephants is likely the most recent common ancestor of all placental mammals, our findings have important implications for convergent evolution beyond the primate taxa, and constitute an important advance toward understanding how and why self-domestication shaped humans’ unique cultural niche.Additional information
supporting information -
Reesink, G. (2009). A connection between Bird's Head and (Proto) Oceanic. In B. Evans (
Ed. ), Discovering history through language, papers in honor of Malcolm Ross (pp. 181-192). Canberra: Pacific Linguistics. -
Reesink, G., Singer, R., & Dunn, M. (2009). Explaining the linguistic diversity of Sahul using population models. PLoS Biology, 7(11), e1000241. doi:10.1371/journal.pbio.1000241.
Abstract
The region of the ancient Sahul continent (present day Australia and New Guinea, and surrounding islands) is home to extreme linguistic diversity. Even apart from the huge Austronesian language family, which spread into the area after the breakup of the Sahul continent in the Holocene, there are hundreds of languages from many apparently unrelated families. On each of the subcontinents, the generally accepted classification recognizes one large, widespread family and a number of unrelatable smaller families. If these language families are related to each other, it is at a depth which is inaccessible to standard linguistic methods. We have inferred the history of structural characteristics of these languages under an admixture model, using a Bayesian algorithm originally developed to discover populations on the basis of recombining genetic markers. This analysis identifies 10 ancestral language populations, some of which can be identified with clearly defined phylogenetic groups. The results also show traces of early dispersals, including hints at ancient connections between Australian languages and some Papuan groups (long hypothesized, never before demonstrated). Systematic language contact effects between members of big phylogenetic groups are also detected, which can in some cases be identified with a diffusional or substrate signal. Most interestingly, however, there remains striking evidence of a phylogenetic signal, with many languages showing negligible amounts of admixture. -
Richards, J. B., Waterworth, D., O'Rahilly, S., Hivert, M.-F., Loos, R. J. F., Perry, J. R. B., Tanaka, T., Timpson, N. J., Semple, R. K., Soranzo, N., Song, K., Rocha, N., Grundberg, E., Dupuis, J., Florez, J. C., Langenberg, C., Prokopenko, I., Saxena, R., Sladek, R., Aulchenko, Y. and 47 moreRichards, J. B., Waterworth, D., O'Rahilly, S., Hivert, M.-F., Loos, R. J. F., Perry, J. R. B., Tanaka, T., Timpson, N. J., Semple, R. K., Soranzo, N., Song, K., Rocha, N., Grundberg, E., Dupuis, J., Florez, J. C., Langenberg, C., Prokopenko, I., Saxena, R., Sladek, R., Aulchenko, Y., Evans, D., Waeber, G., Erdmann, J., Burnett, M.-S., Sattar, N., Devaney, J., Willenborg, C., Hingorani, A., Witteman, J. C. M., Vollenweider, P., Glaser, B., Hengstenberg, C., Ferrucci, L., Melzer, D., Stark, K., Deanfield, J., Winogradow, J., Grassl, M., Hall, A. S., Egan, J. M., Thompson, J. R., Ricketts, S. L., König, I. R., Reinhard, W., Grundy, S., Wichmann, H.-E., Barter, P., Mahley, R., Kesaniemi, Y. A., Rader, D. J., Reilly, M. P., Epstein, S. E., Stewart, A. F. R., Van Duijn, C. M., Schunkert, H., Burling, K., Deloukas, P., Pastinen, T., Samani, N. J., McPherson, R., Davey Smith, G., Frayling, T. M., Wareham, N. J., Meigs, J. B., Mooser, V., Spector, T. D., & Consortium, G. (2009). A genome-wide association study reveals variants in ARL15 that influence adiponectin levels. PLoS Genetics, 5(12): e1000768. doi:10.1371/journal.pgen.1000768.
Abstract
The adipocyte-derived protein adiponectin is highly heritable and inversely associated with risk of type 2 diabetes mellitus (T2D) and coronary heart disease (CHD). We meta-analyzed 3 genome-wide association studies for circulating adiponectin levels (n = 8,531) and sought validation of the lead single nucleotide polymorphisms (SNPs) in 5 additional cohorts (n = 6,202). Five SNPs were genome-wide significant in their relationship with adiponectin (P<} or =5x10(-8)). We then tested whether these 5 SNPs were associated with risk of T2D and CHD using a Bonferroni-corrected threshold of P{< or =0.011 to declare statistical significance for these disease associations. SNPs at the adiponectin-encoding ADIPOQ locus demonstrated the strongest associations with adiponectin levels (P-combined = 9.2x10(-19) for lead SNP, rs266717, n = 14,733). A novel variant in the ARL15 (ADP-ribosylation factor-like 15) gene was associated with lower circulating levels of adiponectin (rs4311394-G, P-combined = 2.9x10(-8), n = 14,733). This same risk allele at ARL15 was also associated with a higher risk of CHD (odds ratio [OR] = 1.12, P = 8.5x10(-6), n = 22,421) more nominally, an increased risk of T2D (OR = 1.11, P = 3.2x10(-3), n = 10,128), and several metabolic traits. Expression studies in humans indicated that ARL15 is well-expressed in skeletal muscle. These findings identify a novel protein, ARL15, which influences circulating adiponectin levels and may impact upon CHD risk. -
Ringersma, J., Zinn, C., & Kemps-Snijders, M. (2009). LEXUS & ViCoS From lexical to conceptual spaces. In 1st International Conference on Language Documentation and Conservation (ICLDC).
Abstract
LEXUS and ViCoS: from lexicon to conceptual spaces LEXUS is a web-based lexicon tool and the knowledge space software ViCoS is an extension of LEXUS, allowing users to create relations between objects in and across lexica. LEXUS and ViCoS are part of the Language Archiving Technology software, developed at the MPI for Psycholinguistics to archive and enrich linguistic resources collected in the framework of language documentation projects. LEXUS is of primary interest for language documentation, offering the possibility to not just create a digital dictionary, but additionally it allows the creation of multi-media encyclopedic lexica. ViCoS provides an interface between the lexical space and the ontological space. Its approach permits users to model a world of concepts and their interrelations based on categorization patterns made by the speech community. We describe the LEXUS and ViCoS functionalities using three cases from DoBeS language documentation projects: (1) Marquesan The Marquesan lexicon was initially created in Toolbox and imported into LEXUS using the Toolbox import functionality. The lexicon is enriched with multi-media to illustrate the meaning of the words in its cultural environment. Members of the speech community consider words as keys to access and describe relevant parts of their life and traditions. Their understanding of words is best described by the various associations they evoke rather than in terms of any formal theory of meaning. Using ViCoS a knowledge space of related concepts is being created. (2) Kola-Sámi Two lexica are being created in LEXUS: RuSaDic lexicon is a Russian-Kildin wordlist in which the entries are of relative limited structure and content. SaRuDiC is a more complex structured lexicon with much richer content, including multi-media fragments and derivations. Using ViCoS we have created a connection between the two lexica, so that speakers who are familiair with Russian and wish to revitalize their Kildin can enter the lexicon through the RuSaDic and from there approach the informative SaRuDic. Similary we will create relations from the two lexica to external open databases, like e.g. Álgu. (3) Beaver A speaker database including kinship relations has been created and the database has been imported into LEXUS. In the LEXUS views the relations for individual speakers are being displayed. Using ViCoS the relational information from the database will be extracted to form a kisnhip relation space with specific relation types, like e.g 'mother-of'. The whole set of relations from the database can be displayed in one ViCoS relation window, and zoom functionality is available. -
Roberts, L., Véronique, D., Nilsson, A., & Tellier, M. (
Eds. ). (2009). EUROSLA Yearbook 9. Amsterdam: John Benjamins.Abstract
The annual conference of the European Second Language Association provides an opportunity for the presentation of second language research with a genuinely European flavour. The theoretical perspectives adopted are wide-ranging and may fall within traditions overlooked elsewhere. Moreover, the studies presented are largely multi-lingual and cross-cultural, as befits the make-up of modern-day Europe. At the same time, the work demonstrates sophisticated awareness of scholarly insights from around the world. The EUROSLA yearbook presents a selection each year of the very best research from the annual conference. Submissions are reviewed and professionally edited, and only those of the highest quality are selected. Contributions are in English. -
Roe, J. M., Vidal-Piñeiro, D., Amlien, I. K., Pan, M., Sneve, M. H., Thiebaut de Schotten, M., Friedrich, P., Sha, Z., Francks, C., Eilertsen, E. M., Wang, Y., Walhovd, K. B., Fjell, A. M., & Westerhausen, R. (2023). Tracing the development and lifespan change of population-level structural asymmetry in the cerebral cortex. eLife, 12: e84685. doi:10.7554/eLife.84685.
Abstract
Cortical asymmetry is a ubiquitous feature of brain organization that is altered in neurodevelopmental disorders and aging. Achieving consensus on cortical asymmetries in humans is necessary to uncover the genetic-developmental mechanisms that shape them and factors moderating cortical lateralization. Here, we delineate population-level asymmetry in cortical thickness and surface area vertex-wise in 7 datasets and chart asymmetry trajectories across life (4-89 years; observations = 3937; 70% longitudinal). We reveal asymmetry interrelationships, heritability, and test associations in UK Biobank (N=∼37,500). Cortical asymmetry was robust across datasets. Whereas areal asymmetry is predominantly stable across life, thickness asymmetry grows in development and declines in aging. Areal asymmetry correlates in specific regions, whereas thickness asymmetry is globally interrelated across cortex and suggests high directional variability in global thickness lateralization. Areal asymmetry is moderately heritable (max h2SNP ∼19%), and phenotypic correlations are reflected by high genetic correlations, whereas heritability of thickness asymmetry is low. Finally, we detected an asymmetry association with cognition and confirm recently-reported handedness links. Results suggest areal asymmetry is developmentally stable and arises in early life, whereas developmental changes in thickness asymmetry may lead to directional variability of global thickness lateralization. Our results bear enough reproducibility to serve as a standard for future brain asymmetry studies. -
Roos, N. M., Takashima, A., & Piai, V. (2023). Functional neuroanatomy of lexical access in contextually and visually guided spoken word production. Cortex, 159, 254-267. doi:10.1016/j.cortex.2022.10.014.
Abstract
Lexical access is commonly studied using bare picture naming, which is visually guided, but in real-life conversation, lexical access is more commonly contextually guided. In this fMRI study, we examined the underlying functional neuroanatomy of contextually and visually guided lexical access, and its consistency across sessions. We employed a context-driven picture naming task with fifteen healthy speakers reading incomplete sentences (word-by-word) and subsequently naming the picture depicting the final word. Sentences provided either a constrained or unconstrained lead–in setting for the picture to be named, thereby approximating lexical access in natural language use. The picture name could be planned either through sentence context (constrained) or picture appearance (unconstrained). This procedure was repeated in an equivalent second session two to four weeks later with the same sample to test for test-retest consistency. Picture naming times showed a strong context effect, confirming that constrained sentences speed up production of the final word depicted as an image. fMRI results showed that the areas common to contextually and visually guided lexical access were left fusiform and left inferior frontal gyrus (both consistently active across-sessions), and middle temporal gyrus. However, non-overlapping patterns were also found, notably in the left temporal and parietal cortices, suggesting a different neural circuit for contextually versus visually guided lexical access.Additional information
supplementary material -
Rossano, F., Brown, P., & Levinson, S. C. (2009). Gaze, questioning and culture. In J. Sidnell (
Ed. ), Conversation analysis: Comparative perspectives (pp. 187-249). Cambridge University Press.Abstract
Relatively little work has examined the function of gaze in interaction. Previous research has mainly addressed issues such as next speaker selection (e.g. Lerner 2003) or engagement and disengagement in the conversation (Goodwin 1981). It has looked for gaze behavior in relation to the roles participants are enacting locally, (e.g., speaker or hearer) and in relation to the unit “turn” in the turn taking system (Goodwin 1980, 1981; Kendon 1967). In his seminal work Kendon (1967) claimed that “there is a very clear and quite consistent pattern, namely, that [the speaker] tends to look away as he begins a long utterance, and in many cases somewhat in advance of it; and that he looks up at his interlocutor as the end of the long utterance approaches, usually during the last phase, and he continues to look thereafter.” Goodwin (Goodwin 1980) introducing the listener into the picture proposed the following two rules: Rule1: A speaker should obtain the gaze of his recipient during the course of a turn of talk. Rule2: a recipient should be gazing at the speaker when the speaker is gazing at the hearer. Rossano’s work (2005) has suggested the possibility of a different level of order for gaze in interaction: the sequential level. In particular he found that gaze withdrawal after sustained mutual gaze tends to occur at sequence possible completion and if both participants withdraw the sequence is complete. By sequence here we refer to a unit that is structured around the notion of adjacency pair. The latter refers to two turns uttered by different speakers orderly organized (first part and second part) and pair type related (greeting-greeting, question-answer). These two turns are related by conditional relevance (Schegloff 1968) that is to say that the first part requires the production of the second and the absence of the latter is noticeable and accountable. Question-anwers are very typical examples of adjacency pairs. In this paper we compare the use of gaze in question-answer sequences in three different populations: Italians, speakers of Mayan Tzeltal (Mexico) and speakers of Yeli Ndye (Russel Island, Papua New Guinea). Relying mainly on dyadic interactions and ordinary conversation we will provide a comparison of the occurrence of gaze in each turn (to compare with the claims of Goodwin and Kendon) and we will describe whether gaze has any effect on the other participant response and whether it persists also during the answer. The three languages and cultures that will be compared here belong to three different continents and have been previously described as potentially following opposite rules: for speakers of Italian and Yeli Ndye unproblematic and preferred engagement of mutual gaze while for speakers of Tzeltal strong mutual gaze avoidance. This paper tries to provide an accurate description of their gaze behavior in this specific type of sequential conversation. -
Rossi, E., Pereira Soares, S. M., Prystauka, Y., Nakamura, M., & Rothman, J. (2023). Riding the (brain) waves! Using neural oscillations to inform bilingualism research. Bilingualism: Language and Cognition, 26(1), 202-215. doi:10.1017/S1366728922000451.
Abstract
The study of the brains’ oscillatory activity has been a standard technique to gain insights into human neurocognition for a relatively long time. However, as a complementary analysis to ERPs, only very recently has it been utilized to study bilingualism and its neural underpinnings. Here, we provide a theoretical and methodological starter for scientists in the (psycho)linguistics and neurocognition of bilingualism field(s) to understand the bases and applications of this analytical tool. Towards this goal, we provide a description of the characteristics of the human neural (and its oscillatory) signal, followed by an in-depth description of various types of EEG oscillatory analyses, supplemented by figures and relevant examples. We then utilize the scant, yet emergent, literature on neural oscillations and bilingualism to highlight the potential of how analyzing neural oscillations can advance our understanding of the (psycho)linguistic and neurocognitive understanding of bilingualism. -
Rossi, G., Dingemanse, M., Floyd, S., Baranova, J., Blythe, J., Kendrick, K. H., Zinken, J., & Enfield, N. J. (2023). Shared cross-cultural principles underlie human prosocial behavior at the smallest scale. Scientific Reports, 13: 6057. doi:10.1038/s41598-023-30580-5.
Abstract
Prosociality and cooperation are key to what makes us human. But different cultural norms can shape our evolved capacities for interaction, leading to differences in social relations. How people share resources has been found to vary across cultures, particularly when stakes are high and when interactions are anonymous. Here we examine prosocial behavior among familiars (both kin and non-kin) in eight cultures on five continents, using video recordings of spontaneous requests for immediate, low-cost assistance (e.g., to pass a utensil). We find that, at the smallest scale of human interaction, prosocial behavior follows cross-culturally shared principles: requests for assistance are very frequent and mostly successful; and when people decline to give help, they normally give a reason. Although there are differences in the rates at which such requests are ignored, or require verbal acceptance, cultural variation is limited, pointing to a common foundation for everyday cooperation around the world.Additional information
Rossi et al. - 2023 - Supplementary materials.pdf -
Rossi, G. (2009). Il discorso scritto interattivo degli SMS: Uno studio pragmatico del "messaggiare". Rivista Italiana di Dialettologia, 33, 143-193. doi:10.1400/148734.
Additional information
https://access.torrossa.com/resources/an/2406102 -
Rowland, C. F., & Theakston, A. L. (2009). The acquisition of auxiliary syntax: A longitudinal elicitation study. Part 2: The modals and auxiliary DO. Journal of Speech, Language, and Hearing Research, 52, 1471-1492. doi:10.1044/1092-4388(2009/08-0037a).
Abstract
Purpose: The study of auxiliary acquisition is central to work on language development and has attracted theoretical work from both nativist and constructivist approaches. This study is part of a 2-part companion set that represents a unique attempt to trace the development of auxiliary syntax by using a longitudinal elicitation methodology. The aim of the research described in this part is to track the development of modal auxiliaries and auxiliary DO in questions and declaratives to provide a more complete picture of the development of the auxiliary system in English-speaking children. Method: Twelve English-speaking children participated in 2 tasks designed to elicit auxiliaries CAN, WILL, and DOES in declaratives and yes/no questions. They completed each task 6 times in total between the ages of 2;10 (years;months) and 3;6. Results: The children’s levels of correct use of the target auxiliaries differed in complex ways according to auxiliary, polarity, and sentence structure, and these relations changed over development. An analysis of the children’s errors also revealed complex interactions between these factors. Conclusions: These data cannot be explained in full by existing theories of auxiliary acquisition. Researchers working within both generativist and constructivist frameworks need to develop more detailed theories of acquisition that predict the pattern of acquisition observed. -
De Ruiter, L. E. (2009). The prosodic marking of topical referents in the German "Vorfeld" by children and adults. The Linguistic Review, 26, 329-354. doi:10.1515/tlir.2009.012.
Abstract
This article reports on the analysis of prosodic marking of topical referents in the German prefield by 5- and 7-year-old children and adults. Natural speech data was obtained from a picture-elicited narration task. The data was analyzed both phonologically and phonetically. In line with previous findings, adult speakers realized topical referents predominantly with the accents L+H* and L*+H, but H* accents and unaccented items were also observed. Children used the same accent types as adults, but the accent types were distributed differently. Also, children aligned pitch minima earlier than adults and produced accents with a decreased speed of pitch change. Possible reasons for these findings are discussed. Contrast – defined in terms of a change of subjecthood – did not affect the choice of pitch accent type and did not influence phonetic realization, underlining the fact that accentuation is often a matter of individual speaker choice.Files private
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Rutz, C., Bronstein, M., Raskin, A., Vernes, S. C., Zacarian, K., & Blasi, D. E. (2023). Using machine learning to decode animal communication. Science, 381(6654), 152-155. doi:10.1126/science.adg7314.
Abstract
The past few years have seen a surge of interest in using machine learning (ML) methods for studying the behavior of nonhuman animals (hereafter “animals”) (1). A topic that has attracted particular attention is the decoding of animal communication systems using deep learning and other approaches (2). Now is the time to tackle challenges concerning data availability, model validation, and research ethics, and to embrace opportunities for building collaborations across disciplines and initiatives. -
Ryskin, R., & Nieuwland, M. S. (2023). Prediction during language comprehension: What is next? Trends in Cognitive Sciences, 27(11), 1032-1052. doi:10.1016/j.tics.2023.08.003.
Abstract
Prediction is often regarded as an integral aspect of incremental language comprehension, but little is known about the cognitive architectures and mechanisms that support it. We review studies showing that listeners and readers use all manner of contextual information to generate multifaceted predictions about upcoming input. The nature of these predictions may vary between individuals owing to differences in language experience, among other factors. We then turn to unresolved questions which may guide the search for the underlying mechanisms. (i) Is prediction essential to language processing or an optional strategy? (ii) Are predictions generated from within the language system or by domain-general processes? (iii) What is the relationship between prediction and memory? (iv) Does prediction in comprehension require simulation via the production system? We discuss promising directions for making progress in answering these questions and for developing a mechanistic understanding of prediction in language. -
Sajovic, J., Meglič, A., Corradi, Z., Khan, M., Maver, A., Vidmar, M. J., Hawlina, M., Cremers, F. P. M., & Fakin, A. (2023). ABCA4Variant c.5714+5G> A in trans with null alleles results in primary RPE damage. Investigative Opthalmology & Visual Science, 64(12): 33. doi:10.1167/iovs.64.12.33.
Abstract
Purpose: To determine the disease pathogenesis associated with the frequent ABCA4 variant c.5714+5G>A (p.[=,Glu1863Leufs*33]).
Methods: Patient-derived photoreceptor precursor cells were generated to analyze the effect of c.5714+5G>A on splicing and perform a quantitative analysis of c.5714+5G>A products. Patients with c.5714+5G>A in trans with a null allele (i.e., c.5714+5G>A patients; n = 7) were compared with patients with two null alleles (i.e., double null patients; n = 11); with a special attention to the degree of RPE atrophy (area of definitely decreased autofluorescence and the degree of photoreceptor impairment (outer nuclear layer thickness and pattern electroretinography amplitude).
Results: RT-PCR of mRNA from patient-derived photoreceptor precursor cells showed exon 40 and exon 39/40 deletion products, as well as the normal transcript. Quantification of products showed 52.4% normal and 47.6% mutant ABCA4 mRNA. Clinically, c.5714+5G>A patients displayed significantly better structural and functional preservation of photoreceptors (thicker outer nuclear layer, presence of tubulations, higher pattern electroretinography amplitude) than double null patients with similar degrees of RPE loss, whereas double null patients exhibited signs of extensive photoreceptor ,damage even in the areas with preserved RPE.
Conclusions: The prototypical STGD1 sequence of events of primary RPE and secondary photoreceptor damage is congruous with c.5714+5G>A, but not the double null genotype, which implies different and genotype-dependent disease mechanisms. We hypothesize that the relative photoreceptor sparing in c.5714+5G>A patients results from the remaining function of the ABCA4 transporter originating from the normally spliced product, possibly by decreasing the direct bisretinoid toxicity on photoreceptor membranes. -
Salomo, D., & Liszkowski, U. (2009). Socialisation of prelinguistic communication. In A. Majid (
Ed. ), Field manual volume 12 (pp. 56-57). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.844597.Abstract
Little is known about cultural differences in interactional practices with infants. The goal of this task is to document the nature and emergence of caregiver-infant interaction/ communication in different cultures. There are two tasks: Task 1 – a brief documentation about the culture under investigation with respect to infant-caregiver interaction and parental beliefs. Task 2 – the “decorated room”, a task designed to elicit infant and caregiver. -
Sander, J., Lieberman, A., & Rowland, C. F. (2023). Exploring joint attention in American Sign Language: The influence of sign familiarity. In M. Goldwater, F. K. Anggoro, B. K. Hayes, & D. C. Ong (
Eds. ), Proceedings of the 45th Annual Meeting of the Cognitive Science Society (CogSci 2023) (pp. 632-638).Abstract
Children’s ability to share attention with another social partner (i.e., joint attention) has been found to support language development. Despite the large amount of research examining the effects of joint attention on language in hearing population, little is known about how deaf children learning sign languages achieve joint attention with their caregivers during natural social interaction and how caregivers provide and scaffold learning opportunities for their children. The present study investigates the properties and timing of joint attention surrounding familiar and novel naming events and their relationship to children’s vocabulary. Naturalistic play sessions of caretaker-child-dyads using American Sign Language were analyzed in regards to naming events of either familiar or novel object labeling events and the surrounding joint attention events. We observed that most naming events took place in the context of a successful joint attention event and that sign familiarity was related to the timing of naming events within the joint attention events. Our results suggest that caregivers are highly sensitive to their child’s visual attention in interactions and modulate joint attention differently in the context of naming events of familiar vs. novel object labels. -
Sankoff, G., & Brown, P. (2009). The origins of syntax in discourse: A case study of Tok Pisin relatives [reprint of 1976 article in Language]. In J. Holm, & S. Michaelis (
Eds. ), Contact languages (vol. II) (pp. 433-476). London: Routledge. -
Sauter, D. (2009). Emotion concepts. In A. Majid (
Ed. ), Field manual volume 12 (pp. 20-30). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.883578.Abstract
The goal of this task is to investigate emotional categories across linguistic and cultural boundaries. There are three core tasks. In order to conduct this task you will need emotional vocalisation stimuli on your computer and you must translate the scenarios at the end of this entry into your local language. -
Sauter, D., Eisner, F., Ekman, P., & Scott, S. K. (2009). Universal vocal signals of emotion. In N. Taatgen, & H. Van Rijn (
Eds. ), Proceedings of the 31st Annual Meeting of the Cognitive Science Society (CogSci 2009) (pp. 2251-2255). Cognitive Science Society.Abstract
Emotional signals allow for the sharing of important information with conspecifics, for example to warn them of danger. Humans use a range of different cues to communicate to others how they feel, including facial, vocal, and gestural signals. Although much is known about facial expressions of emotion, less research has focused on affect in the voice. We compare British listeners to individuals from remote Namibian villages who have had no exposure to Western culture, and examine recognition of non-verbal emotional vocalizations, such as screams and laughs. We show that a number of emotions can be universally recognized from non-verbal vocal signals. In addition we demonstrate the specificity of this pattern, with a set of additional emotions only recognized within, but not across these cultural groups. Our findings indicate that a small set of primarily negative emotions have evolved signals across several modalities, while most positive emotions are communicated with culture-specific signals. -
Scharenborg, O., & Okolowski, S. (2009). Lexical embedding in spoken Dutch. In INTERSPEECH 2009 - 10th Annual Conference of the International Speech Communication Association (pp. 1879-1882). ISCA Archive.
Abstract
A stretch of speech is often consistent with multiple words, e.g., the sequence /hæm/ is consistent with ‘ham’ but also with the first syllable of ‘hamster’, resulting in temporary ambiguity. However, to what degree does this lexical embedding occur? Analyses on two corpora of spoken Dutch showed that 11.9%-19.5% of polysyllabic word tokens have word-initial embedding, while 4.1%-7.5% of monosyllabic word tokens can appear word-initially embedded. This is much lower than suggested by an analysis of a large dictionary of Dutch. Speech processing thus appears to be simpler than one might expect on the basis of statistics on a dictionary. -
Scharenborg, O. (2009). Using durational cues in a computational model of spoken-word recognition. In INTERSPEECH 2009 - 10th Annual Conference of the International Speech Communication Association (pp. 1675-1678). ISCA Archive.
Abstract
Evidence that listeners use durational cues to help resolve temporarily ambiguous speech input has accumulated over the past few years. In this paper, we investigate whether durational cues are also beneficial for word recognition in a computational model of spoken-word recognition. Two sets of simulations were carried out using the acoustic signal as input. The simulations showed that the computational model, like humans, takes benefit from durational cues during word recognition, and uses these to disambiguate the speech signal. These results thus provide support for the theory that durational cues play a role in spoken-word recognition. -
Scheeringa, R., Petersson, K. M., Oostenveld, R., Norris, D. G., Hagoort, P., & Bastiaansen, M. C. M. (2009). Trial-by-trial coupling between EEG and BOLD identifies networks related to alpha and theta EEG power increases during working memory maintenance. Neuroimage, 44, 1224-1238. doi:10.1016/j.neuroimage.2008.08.041.
Abstract
PET and fMRI experiments have previously shown that several brain regions in the frontal and parietal lobe are involved in working memory maintenance. MEG and EEG experiments have shown parametric increases with load for oscillatory activity in posterior alpha and frontal theta power. In the current study we investigated whether the areas found with fMRI can be associated with these alpha and theta effects by measuring simultaneous EEG and fMRI during a modified Sternberg task This allowed us to correlate EEG at the single trial level with the fMRI BOLD signal by forming a regressor based on single trial alpha and theta
power estimates. We observed a right posterior, parametric alpha power increase, which was functionally related to decreases in BOLD in the primary visual cortex and in the posterior part of the right middle temporal gyrus. We relate this finding to the inhibition of neuronal activity that may interfere with WM maintenance. An observed parametric increase in frontal theta power was correlated to a decrease in BOLD in
regions that together form the default mode network. We did not observe correlations between oscillatory EEG phenomena and BOLD in the traditional WM areas. In conclusion, the study shows that simultaneous EEG fMRI recordings can be successfully used to identify the emergence of functional networks in the brain during the execution of a cognitive task. -
Scheibel, M., & Indefrey, P. (2023). Top-down enhanced object recognition in blocking and priming paradigms. Journal of Experimental Psychology: Human Perception and Performance, 49(3), 327-354. doi:10.1037/xhp0001094.
Abstract
Previous studies have demonstrated that context manipulations by semantic blocking and category priming can, under particular design conditions, give rise to semantic facilitation effects. The interpretation of semantic facilitation effects is controversial in the word production literature; perceptual accounts propose that contextually facilitated object recognition may underlie facilitation effects. The present study tested this notion. We investigated the difficulty of object recognition in a semantic blocking and a category priming task. We presented all pictures in gradually de-blurring image sequences and measured the de-blurring level that first allowed for correct object naming as an indicator of the perceptual demands of object recognition. Based on object recognition models assuming a temporal progression from coarse- to fine-grained visual processing, we reasoned that the lower the required level of detail, the more efficient the recognition processes. The results demonstrate that categorically related contexts reduce the level of visual detail required for object naming compared to unrelated contexts, with this effect being most pronounced for shape-distinctive objects and in contexts providing explicit category cues. We propose a top-down explanation based on target predictability of the observed effects. Implications of the recognition effects based on target predictability for the interpretation of context effects observed in latencies are discussed.Additional information
Stimuli, Ratings, Analysis codes -
Scherz, M. D., Schmidt, R., Brown, J. L., Glos, J., Lattenkamp, E. Z., Rakotomalala, Z., Rakotoarison, A., Rakotonindrina, R. T., Randriamalala, O., Raselimanana, A. P., Rasolonjatovo, S. M., Ratsoavina, F. M., Razafindraibe, J. H., Glaw, F., & Vences, M. (2023). Repeated divergence of amphibians and reptiles across an elevational gradient in northern Madagascar. Ecology and Evolution, 13(3): e9914. doi:10.1002/ece3.9914.
Abstract
How environmental factors shape patterns of biotic diversity in tropical ecosystems is an active field of research, but studies examining the possibility of ecological speciation in terrestrial tropical ecosystems are scarce. We use the isolated rainforest herpetofauna on the Montagne d'Ambre (Amber Mountain) massif in northern Madagascar as a model to explore elevational divergence at the level of populations and communities. Based on intensive sampling and DNA barcoding of amphibians and reptiles along a transect ranging from ca. 470–1470 m above sea level (a.s.l.), we assessed a main peak in species richness at an elevation of ca. 1000 m a.s.l. with 41 species. The proportion of local endemics was highest (about 1/3) at elevations >1100 m a.s.l. Two species of chameleons (Brookesia tuberculata, Calumma linotum) and two species of frogs (Mantidactylus bellyi, M. ambony) studied in depth by newly developed microsatellite markers showed genetic divergence up the slope of the mountain, some quite strong, others very weak, but in each case with genetic breaks between 1100 and 1270 m a.s.l. Genetic clusters were found in transect sections significantly differing in bioclimate and herpetological community composition. A decrease in body size was detected in several species with increasing elevation. The studied rainforest amphibians and reptiles show concordant population genetic differentiation across elevation along with morphological and niche differentiation. Whether this parapatric or microallopatric differentiation will suffice for the completion of speciation is, however, unclear, and available phylogeographic evidence rather suggests that a complex interplay between ecological and allopatric divergence processes is involved in generating the extraordinary species diversity of Madagascar's biota. Our study reveals concordant patterns of diversification among main elevational bands, but suggests that these adaptational processes are only part of the complex of processes leading to species formation, among which geographical isolation is probably also important.Additional information
supplementary materials -
Schijven, D., Postema, M., Fukunaga, M., Matsumoto, J., Miura, K., De Zwarte, S. M., Van Haren, N. E. M., Cahn, W., Hulshoff Pol, H. E., Kahn, R. S., Ayesa-Arriola, R., Ortiz-García de la Foz, V., Tordesillas-Gutierrez, D., Vázquez-Bourgon, J., Crespo-Facorro, B., Alnæs, D., Dahl, A., Westlye, L. T., Agartz, I., Andreassen, O. A. and 129 moreSchijven, D., Postema, M., Fukunaga, M., Matsumoto, J., Miura, K., De Zwarte, S. M., Van Haren, N. E. M., Cahn, W., Hulshoff Pol, H. E., Kahn, R. S., Ayesa-Arriola, R., Ortiz-García de la Foz, V., Tordesillas-Gutierrez, D., Vázquez-Bourgon, J., Crespo-Facorro, B., Alnæs, D., Dahl, A., Westlye, L. T., Agartz, I., Andreassen, O. A., Jönsson, E. G., Kochunov, P., Bruggemann, J. M., Catts, S. V., Michie, P. T., Mowry, B. J., Quidé, Y., Rasser, P. E., Schall, U., Scott, R. J., Carr, V. J., Green, M. J., Henskens, F. A., Loughland, C. M., Pantelis, C., Weickert, C. S., Weickert, T. W., De Haan, L., Brosch, K., Pfarr, J.-K., Ringwald, K. G., Stein, F., Jansen, A., Kircher, T. T., Nenadić, I., Krämer, B., Gruber, O., Satterthwaite, T. D., Bustillo, J., Mathalon, D. H., Preda, A., Calhoun, V. D., Ford, J. M., Potkin, S. G., Chen, J., Tan, Y., Wang, Z., Xiang, H., Fan, F., Bernardoni, F., Ehrlich, S., Fuentes-Claramonte, P., Garcia-Leon, M. A., Guerrero-Pedraza, A., Salvador, R., Sarró, S., Pomarol-Clotet, E., Ciullo, V., Piras, F., Vecchio, D., Banaj, N., Spalletta, G., Michielse, S., Van Amelsvoort, T., Dickie, E. W., Voineskos, A. N., Sim, K., Ciufolini, S., Dazzan, P., Murray, R. M., Kim, W.-S., Chung, Y.-C., Andreou, C., Schmidt, A., Borgwardt, S., McIntosh, A. M., Whalley, H. C., Lawrie, S. M., Du Plessis, S., Luckhoff, H. K., Scheffler, F., Emsley, R., Grotegerd, D., Lencer, R., Dannlowski, U., Edmond, J. T., Rootes-Murdy, K., Stephen, J. M., Mayer, A. R., Antonucci, L. A., Fazio, L., Pergola, G., Bertolino, A., Díaz-Caneja, C. M., Janssen, J., Lois, N. G., Arango, C., Tomyshev, A. S., Lebedeva, I., Cervenka, S., Sellgren, C. M., Georgiadis, F., Kirschner, M., Kaiser, S., Hajek, T., Skoch, A., Spaniel, F., Kim, M., Kwak, Y. B., Oh, S., Kwon, J. S., James, A., Bakker, G., Knöchel, C., Stäblein, M., Oertel, V., Uhlmann, A., Howells, F. M., Stein, D. J., Temmingh, H. S., Diaz-Zuluaga, A. M., Pineda-Zapata, J. A., López-Jaramillo, C., Homan, S., Ji, E., Surbeck, W., Homan, P., Fisher, S. E., Franke, B., Glahn, D. C., Gur, R. C., Hashimoto, R., Jahanshad, N., Luders, E., Medland, S. E., Thompson, P. M., Turner, J. A., Van Erp, T. G., & Francks, C. (2023). Large-scale analysis of structural brain asymmetries in schizophrenia via the ENIGMA consortium. Proceedings of the National Academy of Sciences of the United States of America, 120(14): e2213880120. doi:10.1073/pnas.2213880120.
Abstract
Left–right asymmetry is an important organizing feature of the healthy brain that may be altered in schizophrenia, but most studies have used relatively small samples and heterogeneous approaches, resulting in equivocal findings. We carried out the largest case–control study of structural brain asymmetries in schizophrenia, with MRI data from 5,080 affected individuals and 6,015 controls across 46 datasets, using a single image analysis protocol. Asymmetry indexes were calculated for global and regional cortical thickness, surface area, and subcortical volume measures. Differences of asymmetry were calculated between affected individuals and controls per dataset, and effect sizes were meta-analyzed across datasets. Small average case–control differences were observed for thickness asymmetries of the rostral anterior cingulate and the middle temporal gyrus, both driven by thinner left-hemispheric cortices in schizophrenia. Analyses of these asymmetries with respect to the use of antipsychotic medication and other clinical variables did not show any significant associations. Assessment of age- and sex-specific effects revealed a stronger average leftward asymmetry of pallidum volume between older cases and controls. Case–control differences in a multivariate context were assessed in a subset of the data (N = 2,029), which revealed that 7% of the variance across all structural asymmetries was explained by case–control status. Subtle case–control differences of brain macrostructural asymmetry may reflect differences at the molecular, cytoarchitectonic, or circuit levels that have functional relevance for the disorder. Reduced left middle temporal cortical thickness is consistent with altered left-hemisphere language network organization in schizophrenia. -
Schiller, N., Horemans, I., Ganushchak, L. Y., & Koester, D. (2009). Event-related brain potentials during monitoring of speech errors. NeuroImage, 44, 520-530. doi:10.1016/j.neuroimage.2008.09.019.
Abstract
When we perceive speech, our goal is to extract the meaning of the verbal message which includes semantic processing. However, how deeply do we process speech in different situations? In two experiments, native Dutch participants heard spoken sentences describing simultaneously presented pictures. Sentences either correctly described the pictures or contained an anomalous final word (i.e. a semantically or phonologically incongruent word). In the first experiment, spoken sentences were task-irrelevant and both anomalous conditions elicited similar centro-parietal N400s that were larger in amplitude than the N400 for the correct condition. In the second experiment, we ensured that participants processed the same stimuli semantically. In an early time window, we found similar phonological mismatch negativities for both anomalous conditions compared to the correct condition. These negativities were followed by an N400 that was larger for semantic than phonological errors. Together, these data suggest that we process speech semantically, even if the speech is task-irrelevant. Once listeners allocate more cognitive resources to the processing of speech, we suggest that they make predictions for upcoming words, presumably by means of the production system and an internal monitoring loop, to facilitate lexical processing of the perceived speech -
Schimke, S. (2009). The acquisition of finiteness by Turkish learners of German and Turkish learners of French: Investigating knowledge of forms and functions in production and comprehension. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Abstract
Sarah Schimke onderzocht hoe mensen die op volwassen leeftijd naar een ander land verhuizen de taal van dit land leren, ook zonder veel taalinstructie te krijgen. Twee groepen werden onderzocht: Turkse immigranten in Frankrijk en Turkse immigranten in Duitsland. De resultaten laten zien dat volwassen leerlingen in het begin van het verwervingsproces een gemakkelijkere variatie van de doeltaal creëren. Er worden wel woorden van de doeltaal verworven en gebruikt, maar er wordt een gesimplificeerde grammatica toegepast. In het bijzonder gebruiken leerlingen in deze fase geen finietheid, dus geen morfologische variaties van werkwoorden. Schimke toont aan dat als finietheid wordt verworven, dit de grammatica van de leerlingen sterk verandert en dat deze veel sterker op de doeltaalgrammatica begint te lijken. Ook toont ze aan dat dit proces door karakteristieken van de doeltaal, zoals de woordvolgorde en de complexiteit van de morfologie, wordt beïnvloedAdditional information
full text via Radboud Repository -
Schimke, S. (2009). Does finiteness mark assertion? A picture selection study with Turkish learners and native speakers of German. In C. Dimroth, & P. Jordens (
Eds. ), Functional categories in learner language (pp. 169-202). Berlin: Mouton de Gruyter. -
Schoffelen, J.-M., & Gross, J. (2009). Source connectivity analysis with MEG and EEG. Human Brain Mapping, 30, 1857-1865. doi: 10.1002/hbm.20745.
Abstract
Interactions between functionally specialized brain regions are crucial for normal brain function. Magnetoencephalography (MEG) and electroencephalography (EEG) are techniques suited to capture these interactions, because they provide whole head measurements of brain activity in the millisecond range. More than one sensor picks up the activity of an underlying source. This field spread severely limits the utility of connectivity measures computed directly between sensor recordings. Consequentially, neuronal interactions should be studied on the level of the reconstructed sources. This article reviews several methods that have been applied to investigate interactions between brain regions in source space. We will mainly focus on the different measures used to quantify connectivity, and on the different strategies adopted to identify regions of interest. Despite various successful accounts of MEG and EEG source connectivity, caution with respect to the interpretation of the results is still warranted. This is due to the fact that effects of field spread can never be completely abolished in source space. However, in this very exciting and developing field of research this cautionary note should not discourage researchers from further investigation into the connectivity between neuronal sources. -
Schuppler, B., Van Dommelen, W., Koreman, J., & Ernestus, M. (2009). Word-final [t]-deletion: An analysis on the segmental and sub-segmental level. In Proceedings of the 10th Annual Conference of the International Speech Communication Association (Interspeech 2009) (pp. 2275-2278). Causal Productions Pty Ltd.
Abstract
This paper presents a study on the reduction of word-final [t]s in conversational standard Dutch. Based on a large amount of tokens annotated on the segmental level, we show that the bigram frequency and the segmental context are the main predictors for the absence of [t]s. In a second study, we present an analysis of the detailed acoustic properties of word-final [t]s and we show that bigram frequency and context also play a role on the subsegmental level. This paper extends research on the realization of /t/ in spontaneous speech and shows the importance of incorporating sub-segmental properties in models of speech. -
Schuppler, B., van Doremalen, J., Scharenborg, O., Cranen, B., & Boves, L. (2009). Using temporal information for improving articulatory-acoustic feature classification. Automatic Speech Recognition and Understanding, IEEE 2009 Workshop, 70-75. doi:10.1109/ASRU.2009.5373314.
Abstract
This paper combines acoustic features with a high temporal and a high frequency resolution to reliably classify articulatory events of short duration, such as bursts in plosives. SVM classification experiments on TIMIT and SVArticulatory showed that articulatory-acoustic features (AFs) based on a combination of MFCCs derived from a long window of 25ms and a short window of 5ms that are both shifted with 2.5ms steps (Both) outperform standard MFCCs derived with a window of 25 ms and a shift of 10 ms (Baseline). Finally, comparison of the TIMIT and SVArticulatory results showed that for classifiers trained on data that allows for asynchronously changing AFs (SVArticulatory) the improvement from Baseline to Both is larger than for classifiers trained on data where AFs change simultaneously with the phone boundaries (TIMIT). -
Scott, S. K., Sauter, D., & McGettigan, C. (2009). Brain mechanisms for processing perceived emotional vocalizations in humans. In S. M. Brudzynski (
Ed. ), Handbook of mammalian vocalization: An integrative neuroscience approach (pp. 187-198). London: Academic Press.Abstract
Humans express emotional information in their facial expressions and body movements, as well as in their voice. In this chapter we consider the neural processing of a specific kind of vocal expressions, non-verbal emotional vocalizations e.g. laughs and sobs. We outline evidence, from patient studies and functional imaging studies, for both emotion specific and more general processing of emotional information in the voice. We relate these findings to evidence for both basic and dimensional accounts of the representations of emotion. We describe in detail an fMRI study of positive and negative non-verbal expressions of emotion, which revealed that prefrontal areas involved in the control of oro-facial movements were also sensitive to different kinds of vocal emotional information. -
Scott, S. K., McGettigan, C., & Eisner, F. (2009). A little more conversation, a little less action: Candidate roles for motor cortex in speech perception. Nature Reviews Neuroscience, 10(4), 295-302. doi:10.1038/nrn2603.
Abstract
The motor theory of speech perception assumes that activation of the motor system is essential in the perception of speech. However, deficits in speech perception and comprehension do not arise from damage that is restricted to the motor cortex, few functional imaging studies reveal activity in motor cortex during speech perception, and the motor cortex is strongly activated by many different sound categories. Here, we evaluate alternative roles for the motor cortex in spoken communication and suggest a specific role in sensorimotor processing in conversation. We argue that motor-cortex activation it is essential in joint speech, particularly for the timing of turn-taking. -
Scott, L. J., Muglia, P., Kong, X. Q., Guan, W., Flickinger, M., Upmanyu, R., Tozzi, F., Li, J. Z., Burmeister, M., Absher, D., Thompson, R. C., Francks, C., Meng, F., Antoniades, A., Southwick, A. M., Schatzberg, A. F., Bunney, W. E., Barchas, J. D., Jones, E. G., Day, R. and 13 moreScott, L. J., Muglia, P., Kong, X. Q., Guan, W., Flickinger, M., Upmanyu, R., Tozzi, F., Li, J. Z., Burmeister, M., Absher, D., Thompson, R. C., Francks, C., Meng, F., Antoniades, A., Southwick, A. M., Schatzberg, A. F., Bunney, W. E., Barchas, J. D., Jones, E. G., Day, R., Matthews, K., McGuffin, P., Strauss, J. S., Kennedy, J. L., Middleton, L., Roses, A. D., Watson, S. J., Vincent, J. B., Myers, R. M., Farmer, A. E., Akil, H., Burns, D. K., & Boehnke, M. (2009). Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry. Proceedings of the National Academy of Sciences of the United States of America, 106(18), 7501-7506. doi:10.1073/pnas.0813386106.
Abstract
Bipolar disorder (BP) is a disabling and often life-threatening disorder that affects approximately 1% of the population worldwide. To identify genetic variants that increase the risk of BP, we genotyped on the Illumina HumanHap550 Beadchip 2,076 bipolar cases and 1,676 controls of European ancestry from the National Institute of Mental Health Human Genetics Initiative Repository, and the Prechter Repository and samples collected in London, Toronto, and Dundee. We imputed SNP genotypes and tested for SNP-BP association in each sample and then performed meta-analysis across samples. The strongest association P value for this 2-study meta-analysis was 2.4 x 10(-6). We next imputed SNP genotypes and tested for SNP-BP association based on the publicly available Affymetrix 500K genotype data from the Wellcome Trust Case Control Consortium for 1,868 BP cases and a reference set of 12,831 individuals. A 3-study meta-analysis of 3,683 nonoverlapping cases and 14,507 extended controls on >2.3 M genotyped and imputed SNPs resulted in 3 chromosomal regions with association P approximately 10(-7): 1p31.1 (no known genes), 3p21 (>25 known genes), and 5q15 (MCTP1). The most strongly associated nonsynonymous SNP rs1042779 (OR = 1.19, P = 1.8 x 10(-7)) is in the ITIH1 gene on chromosome 3, with other strongly associated nonsynonymous SNPs in GNL3, NEK4, and ITIH3. Thus, these chromosomal regions harbor genes implicated in cell cycle, neurogenesis, neuroplasticity, and neurosignaling. In addition, we replicated the reported ANK3 association results for SNP rs10994336 in the nonoverlapping GSK sample (OR = 1.37, P = 0.042). Although these results are promising, analysis of additional samples will be required to confirm that variant(s) in these regions influence BP risk.Additional information
Supp_Inform_Scott_et_al.pdf -
Segaert, K., Nygård, G. E., & Wagemans, J. (2009). Identification of everyday objects on the basis of kinetic contours. Vision Research, 49(4), 417-428. doi:10.1016/j.visres.2008.11.012.
Abstract
Using kinetic contours derived from everyday objects, we investigated how motion affects object identification. In order not to be distinguishable when static, kinetic contours were made from random dot displays consisting of two regions, inside and outside the object contour. In Experiment 1, the dots were moving in only one of two regions. The objects were identified nearly equally well as soon as the dots either in the figure or in the background started to move. RTs decreased with increasing motion coherence levels and were shorter for complex, less compact objects than for simple, more compact objects. In Experiment 2, objects could be identified when the dots were moving both in the figure and in the background with speed and direction differences between the two. A linear increase in either the speed difference or the direction difference caused a linear decrease in RT for correct identification. In addition, the combination of speed and motion differences appeared to be super-additive. -
Seidl, A., Cristia, A., Bernard, A., & Onishi, K. H. (2009). Allophonic and phonemic contrasts in infants' learning of sound patterns. Language Learning and Development, 5, 191-202. doi:10.1080/15475440902754326.
Abstract
French-learning 11-month-old and English-learning 11- and 4-month-old infants were familiarized with consonant–vowel–consonant syllables in which the final consonants were dependent on whether the preceding vowel was oral or nasal. Oral and nasal vowels are present in the ambient language of all participants, but vowel nasality is phonemic (contrastive) in French and allophonic (noncontrastive) in English. After familiarization, infants heard novel syllables that either followed or violated the familiarized patterns. French-learning 11-month-olds and English-learning 4-month-olds displayed a reliable pattern of preference demonstrating learning and generalization of the patterns, while English-learning 11-month-olds oriented equally to syllables following and violating the familiarized patterns. The results are consistent with an experience-driven reduction of attention to allophonic contrasts by as early as 11 months, which influences phonotactic learning. -
Seijdel, N., Marshall, T. R., & Drijvers, L. (2023). Rapid invisible frequency tagging (RIFT): A promising technique to study neural and cognitive processing using naturalistic paradigms. Cerebral Cortex, 33(5), 1626-1629. doi:10.1093/cercor/bhac160.
Abstract
Frequency tagging has been successfully used to investigate selective stimulus processing in electroencephalography (EEG) or magnetoencephalography (MEG) studies. Recently, new projectors have been developed that allow for frequency tagging at higher frequencies (>60 Hz). This technique, rapid invisible frequency tagging (RIFT), provides two crucial advantages over low-frequency tagging as (i) it leaves low-frequency oscillations unperturbed, and thus open for investigation, and ii) it can render the tagging invisible, resulting in more naturalistic paradigms and a lack of participant awareness. The development of this technique has far-reaching implications as oscillations involved in cognitive processes can be investigated, and potentially manipulated, in a more naturalistic manner. -
Sekine, K. (2009). Changes in frame of reference use across the preschool years: A longitudinal study of the gestures and speech produced during route descriptions. Language and Cognitive Processes, 24(2), 218-238. doi:10.1080/01690960801941327.
Abstract
This study longitudinally investigated developmental changes in the frame of reference used by children in their gestures and speech. Fifteen children, between 4 and 6 years of age, were asked once a year to describe their route home from their nursery school. When the children were 4 years old, they tended to produce gestures that directly and continuously indicated their actual route in a large gesture space. In contrast, as 6-year-olds, their gestures were segmented and did not match the actual route. Instead, at age 6, the children seemed to create a virtual space in front of themselves to symbolically describe their route. These results indicate that the use of frames of reference develops across the preschool years, shifting from an actual environmental to an abstract environmental frame of reference. Factors underlying the development of frame of reference, including verbal encoding skills and experience, are discussed. -
Sekine, K., & Kajikawa, T. (2023). Does the spatial distribution of a speaker's gaze and gesture impact on a listener's comprehension of discourse? In W. Pouw, J. Trujillo, H. R. Bosker, L. Drijvers, M. Hoetjes, J. Holler, S. Kadava, L. Van Maastricht, E. Mamus, & A. Ozyurek (
Eds. ), Gesture and Speech in Interaction (GeSpIn) Conference. doi:10.17617/2.3527208.Abstract
This study investigated the impact of a speaker's gaze direction
on a listener's comprehension of discourse. Previous research
suggests that hand gestures play a role in referent allocation,
enabling listeners to better understand the discourse. The
current study aims to determine whether the speaker's gaze
direction has a similar effect on reference resolution as co-
speech gestures. Thirty native Japanese speakers participated in
the study and were assigned to one of three conditions:
congruent, incongruent, or speech-only. Participants watched
36 videos of an actor narrating a story consisting of three
sentences with two protagonists. The speaker consistently
used hand gestures to allocate one protagonist to the lower right
and the other to the lower left space, while directing her gaze to
either space of the target person (congruent), the other person
(incongruent), or no particular space (speech-only). Participants
were required to verbally answer a question about the target
protagonist involved in an accidental event as quickly as
possible. Results indicate that participants in the congruent
condition exhibited faster reaction times than those in the
incongruent condition, although the difference was not
significant. These findings suggest that the speaker's gaze
direction is not enough to facilitate a listener's comprehension
of discourse. -
Senft, G. (2009). Bronislaw Kasper Malinowski. In G. Senft, J.-O. Östman, & J. Verschueren (
Eds. ), Culture and language use (pp. 210-225). Amsterdam: John Benjamins. -
Senft, G., Östman, J.-O., & Verschueren, J. (
Eds. ). (2009). Culture and language use. Amsterdam: John Benjamins. -
Senft, G. (2009). Elicitation. In G. Senft, J.-O. Östman, & J. Verschueren (
Eds. ), Culture and language use (pp. 105-109). Amsterdam: John Benjamins. -
Senft, G. (2009). [Review of the book Geschichten und Gesänge von der Insel Nias in Indonesien ed. by Johannes Maria Hämmerle]. Rundbrief - Forum für Mitglieder des Pazifik-Netzwerkes e.V., 78/09, 29-31.
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Senft, G. (2009). Fieldwork. In G. Senft, J.-O. Östman, & J. Verschueren (
Eds. ), Culture and language use (pp. 131-139). Amsterdam: John Benjamins. -
Senft, G. (2009). Linguistische Feldforschung. In H. M. Müller (
Ed. ), Arbeitsbuch Linguistik (2nd rev. ed., pp. 353-363). Paderborn: Schöningh UTB.Abstract
This article provides a brief introduction into field research, its aims, its methods and the various phases of fieldwork. -
Senft, G. (2009). Introduction. In G. Senft, J.-O. Östman, & J. Verschueren (
Eds. ), Culture and language use (pp. 1-17). Amsterdam: John Benjamins. -
Senft, G. (2009). Phatic communion. In G. Senft, J.-O. Östman, & J. Verschueren (
Eds. ), Culture and language use (pp. 226-233). Amsterdam: John Benjamins. -
Senft, G. (2009). Sind die emotionalen Gesichtsausdrücke des Menschen in allen Kulturen gleich? In Max Planck Society (
Ed. ), Max-Planck-Gesellschaft Jahrbuch 2008/09 Tätigkeitsberichte und Publikationen (DVD) (pp. 1-4). München: Max Planck Society for the Advancement of Science.Abstract
This paper presents a project which tests the hypothesis of the universality of facial expressions of emotions crossculturally and crosslinguistically. First results are presented which contradict the hypothesis. -
Senft, G., & Basso, E. B. (
Eds. ). (2009). Ritual communication. Oxford: Berg. -
Senft, G. (2009). Trobriand Islanders' forms of ritual communication. In G. Senft, & E. B. Basso (
Eds. ), Ritual communication (pp. 81-101). Oxford: Berg. -
Senft, G. (2023). The system of classifiers in Kilivila - The role of these formatives and their functions. In M. Allassonnière-Tang, & M. Kilarski (
Eds. ), Nominal Classification in Asia and Oceania. Functional and diachronic perspectives (pp. 10-29). Amsterdam: John Benjamins. doi:10.1075/cilt.362.02sen.Abstract
This paper presents the complex system of classifiers in Kilivila, the language of the Trobriand Islanders of Papua New Guinea. After a brief introduction to the language and its speakers, the classifier system is briefly described with respect to the role of these formatives for the word formation of Kilivila numerals, adjectives, demonstratives and one form of an interrogative pronoun/adverb. Then the functions the classifier system fulfils with respect to concord, temporary classification, the unitizing of nominal expressions, nominalization, indication of plural, anaphoric reference as well as text and discourse coherence are discussed and illustrated. The paper ends with some language specific and cross-linguistic questions for further research. -
Sert, C., Hubers, F., Redl, T., & De Hoop, H. (2023). On the acceptability of the not so dummy auxiliary ‘do’ in Dutch. Linguistics in the Netherlands, 40, 210-229. doi:10.1075/avt.00088.ser.
Abstract
The auxiliary doen ‘do’ in standard Dutch is usually described as ‘dummy’ because it supposedly adds nothing substantial to the meaning of the sentence. We argue, however, that the auxiliary does have a function in the sentence, as a marker of either habitual or intentional aspect. In an online production experiment, we investigated the acceptability of the allegedly dummy auxiliary doen ‘do’. Results show that the degree of acceptability of the auxiliary doen ‘do’ is very low, even lower than the widely disapproved use of hun ‘them’ as a subject in Dutch. However, because a significant difference was found in the acceptability between the habitual and the intentional reading, we conclude that the auxiliary doen ‘do’ in Dutch cannot be dummy, i.e. semantically empty. -
Seuren, P. A. M. (2023). A refutation of positivism in philosophy of mind: Thinking, reality, and language. London: Routledge.
Abstract
This book argues that positivism, though now the dominant paradigm for both the natural and the human sciences, is intrinsically unfit for the latter. In particular, it is unfit for linguistics and cognitive science, where it is ultimately self-destructive, since it fails to account for causality, while the mind, the primary object of research of the human sciences, cannot be understood unless considered to be an autonomous causal force.
Author Pieter Albertus Maria Seuren, who died shortly after this manuscript was finished and after a remarkable career, reviews the history of this issue since the seventeenth century. He focuses on Descartes, Leibniz, British Empiricism and Kant, arguing that neither cognition nor language can be adequately accounted for unless the mind is given its full due. This implies that a distinction must be made—following Alexius Meinong, but against Russell and Quine—between actual and virtual reality. The latter is a product of the causally active mind and a necessary ingredient for the setting up of mental models, without which neither cognition nor language can function. Mental models are coherent sets of propositions, and can be wholly or partially true or false. Positivism rules out mental models, blocking any serious semantics and thereby reducing both language and cognition to caricatures of themselves. Seuren presents a causal theory of meaning, linking up language with cognition and solving the old question of what meaning actually amounts to. -
Seuren, P. A. M. (2009). Concerning the roots of transformational generative grammar [Review article]. Historiographia Linguistica, 36, 97-115. doi:10.1075/hl.36.1.05seu.
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Seuren, P. A. M. (2009). Language from within: Vol. 1. Language in cognition. Oxford: Oxford University Press.
Abstract
Language in Cognition argues that language is based on the human construal of reality. Humans refer to and quantify over virtual entities with the same ease as they do over actual entities: the natural ontology of language, the author argues, must therefore comprise both actual and virtual entities and situations. He reformulates speech act theory, suggesting that the primary function of language is less the transfer of information than the establishing of socially binding commitments or appeals based on the proposition expressed. This leads him first to a new analysis of the systems and structures of cognitive language machinery and their ecological embedding, and finally to a reformulation of the notion of meaning, in which sentence meaning is distinguished from lexical meaning and the vagaries and multifarious applications of lexical meanings may be explained and understood. This is the first of a two-volume foundational study of language, published under the title, Language from Within. Pieter Seuren discusses and analyses such apparently diverse issues as the ontology underlying the semantics of language, speech act theory, intensionality phenomena, the machinery and ecology of language, sentential and lexical meaning, the natural logic of language and cognition, and the intrinsically context-sensitive nature of language - and shows them to be intimately linked. Throughout his ambitious enterprise, he maintains a constant dialogue with established views, reflecting on their development from Ancient Greece to the present. The resulting synthesis concerns central aspects of research and theory in linguistics, philosophy, and cognitive science. -
Seuren, P. A. M. (2009). Hesseling, Dirk Christiaan. In H. Stammerjohann (
Ed. ), Lexicon Grammaticorum: A bio-bibliographical companion to the history of linguistics. Volume 1. (2nd ed.) (pp. 649-650). Berlin: DeGruyter. -
Seuren, P. A. M. (2009). Logical systems and natural logical intuitions. In Current issues in unity and diversity of languages: Collection of the papers selected from the CIL 18, held at Korea University in Seoul on July 21-26, 2008. http://www.cil18.org (pp. 53-60).
Abstract
The present paper is part of a large research programme investigating the nature and properties of the predicate logic inherent in natural language. The general hypothesis is that natural speakers start off with a basic-natural logic, based on natural cognitive functions, including the basic-natural way of dealing with plural objects. As culture spreads, functional pressure leads to greater generalization and mathematical correctness, yielding ever more refined systems until the apogee of standard modern predicate logic. Four systems of predicate calculus are considered: Basic-Natural Predicate Calculus (BNPC), Aritsotelian-Abelardian Predicate Calculus (AAPC), Aritsotelian-Boethian Predicate Calculus (ABPC), also known as the classic Square of Opposition, and Standard Modern Predicate Calculus (SMPC). (ABPC is logically faulty owing to its Undue Existential Import (UEI), but that fault is repaired by the addition of a presuppositional component to the logic.) All four systems are checked against seven natural logical intuitions. It appears that BNPC scores best (five out of seven), followed by ABPC (three out of seven). AAPC and SMPC finish ex aequo with two out of seven. -
Seuren, P. A. M. (2009). The clitics mechanism in French and Italian. Probus, 21(1), 83-142. doi:10.1515/prbs.2009.004.
Abstract
The article concentrates on the question of the composition, the internal ordering and the placement of clitic-clusters (C-clusters) in French and Italian, though clitic data from other languages are drawn in occasionally. The system proposed is top-down transformational, in the terms of Semantic Syntax (Seuren, Blackwell, 1996). Clitics are taken to originate in underlying structure as canonical argument terms or adverbial constituents of clauses. During the process of transformation from semantic to surface form, nonfocus, nonsubject, pronominal argument terms are assigned values for the features of animacy ([±an]), dative status ([±dat]) and reflexivity ([±refl]). On the basis of these, the rule feature cm, inducing clitic movement, is assigned or withheld. Plus-values increase, and minus-values reduce, the “semantic weight” of the clitics in question. Pronouns without the feature cm are not cliticised and stay in their canonical term position in their full phonological form. Pronouns with the feature cm are attached to the nearest verb form giving rise to clitic clusters, which accounts for the composition of well-formed C-clusters. The attachment of clitics to a cluster occurs in a fixed order, which accounts for the ordering of clitics in well-formed clusters. Branching directionality, together with a theory of complementation, accounts for the placement of C-clusters. Clitics often take on a reduced phonological form. It is argued that, in French and Italian, which are languages with a right-branching syntax and a left-branching flectional morphology, postverbal clitics, or enclitics, are part of left-branching structures and hence fit naturally into the morphology. They are best categorised as affixes. Occasionally, as in Italian glielo, dative clitics (e.g., gli) turn preceding lighter clitics (e.g., lo) into affixes, resulting in the left-branching structure glielo, where -lo is an affix. In a brief Intermezzo, instances are shown of the irregular but revealing lui-le-lui phenomenon in French, and its much less frequent analog in Italian. On these assumptions, supported by the official orthographies, the clitic systems of French and Italian largely coincide. This new analysis of the facts in question invites further reflection on the interface between syntax and morphology. The final section deals with reflexive clitics. There, the system begins to be unable to account for the observed facts. At this end, therefore, the system is allowed to remain fraying, till further research brings greater clarity. -
Seuren, P. A. M., & Hamans, C. (2009). Semantic conditioning of syntactic rules: Evidentiality and auxiliation in English and Dutch. Folia Linguistica, 43(1), 135-169. doi:10.1515/FLIN.2009.004.
Abstract
Ever since the category of evidentiality has been identified in the verbal grammar of certain languages, it has been assumed that evidentiality plays no role in the grammars of those languages that have not incorporated it into their verb morphology or at least their verb clusters. The present paper attempts to show that even if evidentiality is not visible in the verbal grammar of English and Dutch, it appears to be a motivating factor, both historically and synchronically, in the process whereby evidential predicates are made to play a subordinate syntactic role with regard to their embedded subject clause. This process, known as AUXILIATION (Kuteva 2001), appears to manifest itself in a variety of, often successive, grammatical processes or rules, such as Subject-to-Subject Raising (the subject of the embedded clause becomes the subject of the main verb, as in John is likely to be late), V-ING (as in The man stopped breathing), Incorporation-by-Lowering (the evidential main verb is lowered on to the V-constituent of the embedded subject clause, as in John may have left), or Incorporation-by-Raising (also known as Predicate Raising), not or hardly attested in English but dominant in Dutch. A list is provided of those English (and Dutch) predicates that induce one of the above-mentioned auxiliation rules and it is checked how many of those have an evidential meaning. This is set off against evidential predicates that do not induce an auxiliation rule. It results that, for English and Dutch, lexical evidentiality is a powerful determinant for the induction of syntactic auxiliation. -
Seuren, P. A. M. (2009). Voorhoeve, Jan. In H. Stammerjohann (
Ed. ), Lexicon Grammaticorum: A bio-bibliographical companion to the history of linguistics. Volume 2. (2nd ed.) (pp. 1593-1594). Berlin: DeGruyter. -
Severijnen, G. G. A., Bosker, H. R., & McQueen, J. M. (2023). Syllable rate drives rate normalization, but is not the only factor. In R. Skarnitzl, & J. Volín (
Eds. ), Proceedings of the 20th International Congress of the Phonetic Sciences (ICPhS 2023) (pp. 56-60). Prague: Guarant International.Abstract
Speech is perceived relative to the speech rate in the context. It is unclear, however, what information listeners use to compute speech rate. The present study examines whether listeners use the number of
syllables per unit time (i.e., syllable rate) as a measure of speech rate, as indexed by subsequent vowel perception. We ran two rate-normalization experiments in which participants heard duration-matched word lists that contained either monosyllabic
vs. bisyllabic words (Experiment 1), or monosyllabic vs. trisyllabic pseudowords (Experiment 2). The participants’ task was to categorize an /ɑ-aː/ continuum that followed the word lists. The monosyllabic condition was perceived as slower (i.e., fewer /aː/ responses) than the bisyllabic and
trisyllabic condition. However, no difference was observed between bisyllabic and trisyllabic contexts. Therefore, while syllable rate is used in perceiving speech rate, other factors, such as fast speech processes, mean F0, and intensity, must also influence rate normalization. -
Severijnen, G. G. A., Di Dona, G., Bosker, H. R., & McQueen, J. M. (2023). Tracking talker-specific cues to lexical stress: Evidence from perceptual learning. Journal of Experimental Psychology: Human Perception and Performance, 49(4), 549-565. doi:10.1037/xhp0001105.
Abstract
When recognizing spoken words, listeners are confronted by variability in the speech signal caused by talker differences. Previous research has focused on segmental talker variability; less is known about how suprasegmental variability is handled. Here we investigated the use of perceptual learning to deal with between-talker differences in lexical stress. Two groups of participants heard Dutch minimal stress pairs (e.g., VOORnaam vs. voorNAAM, “first name” vs. “respectable”) spoken by two male talkers. Group 1 heard Talker 1 use only F0 to signal stress (intensity and duration values were ambiguous), while Talker 2 used only intensity (F0 and duration were ambiguous). Group 2 heard the reverse talker-cue mappings. After training, participants were tested on words from both talkers containing conflicting stress cues (“mixed items”; e.g., one spoken by Talker 1 with F0 signaling initial stress and intensity signaling final stress). We found that listeners used previously learned information about which talker used which cue to interpret the mixed items. For example, the mixed item described above tended to be interpreted as having initial stress by Group 1 but as having final stress by Group 2. This demonstrates that listeners learn how individual talkers signal stress and use that knowledge in spoken-word recognition.Additional information
XHP-2022-2184_Supplemental_materials_xhp0001105.docx -
Seyfried, F., & Udden, J. (2023). Phonotactics and syntax: Investigating functional specialisation during structured sequence processing. Language, Cognition and Neuroscience, 38(3), 346-358. doi:10.1080/23273798.2022.2116462.
Abstract
Frontal lobe organisation displays a functional gradient, with overarching processing goals located in parts anterior to more subordinate goals, processed more posteriorly. Functional specialisation for syntax and phonology within language relevant areas has been supported by meta-analyses and reviews, but never directly tested experimentally. We tested for organised functional specialisation by manipulating syntactic case and phonotactics, creating violations at the end of otherwise matched and predictable sentences. Both violations led to increased activation in expected language regions. We observe the clearest signs of a functional gradient for language processing in the medial frontal cortex, where syntactic violations activated a more anterior portion compared to the phonotactic violations. A large overlap of syntactic and phonotactic processing in the left inferior frontal gyrus (LIFG) supports the view that general structured sequence processes are located in this area. These findings are relevant for understanding how sentence processing is implemented in hierarchically organised processing steps in the frontal lobe.Additional information
supplementary methods -
Sha, Z., Schijven, D., Fisher, S. E., & Francks, C. (2023). Genetic architecture of the white matter connectome of the human brain. Science Advances, 9(7): eadd2870. doi:10.1126/sciadv.add2870.
Abstract
White matter tracts form the structural basis of large-scale brain networks. We applied brain-wide tractography to diffusion images from 30,810 adults (U.K. Biobank) and found significant heritability for 90 node-level and 851 edge-level network connectivity measures. Multivariate genome-wide association analyses identified 325 genetic loci, of which 80% had not been previously associated with brain metrics. Enrichment analyses implicated neurodevelopmental processes including neurogenesis, neural differentiation, neural migration, neural projection guidance, and axon development, as well as prenatal brain expression especially in stem cells, astrocytes, microglia, and neurons. The multivariate association profiles implicated 31 loci in connectivity between core regions of the left-hemisphere language network. Polygenic scores for psychiatric, neurological, and behavioral traits also showed significant multivariate associations with structural connectivity, each implicating distinct sets of brain regions with trait-relevant functional profiles. This large-scale mapping study revealed common genetic contributions to variation in the structural connectome of the human brain.Additional information
figs. S1 to S14, legends for tables S1 to S31 tables S1 to S31 link to Preprint on bioRxiv -
Siahaan, P., & Wijaya Rajeg, G. P. (2023). Multimodal language use in Indonesian: Recurrent gestures associated with negation. In W. Pouw, J. Trujillo, H. R. Bosker, L. Drijvers, M. Hoetjes, J. Holler, S. Kadava, L. Van Maastricht, E. Mamus, & A. Ozyurek (
Eds. ), Gesture and Speech in Interaction (GeSpIn) Conference. doi:10.17617/2.3527196.Abstract
This paper presents research findings on manual gestures
associated with negation in Indonesian, utilizing data sourced
from talk shows available on YouTube. The study reveals that
Indonesian speakers employ six recurrent negation gestures,
which have been observed in various languages worldwide.
This suggests that gestures exhibiting a stable form-meaning
relationship and recurring frequently in relation to negation are
prevalent around the globe, although their distribution may
differ across cultures and languages. Furthermore, the paper
demonstrates that negation gestures are not strictly tied to
verbal negation. Overall, the aim of this paper is to contribute
to a deeper understanding of the conventional usage and cross-
linguistic distribution of recurrent gestures. -
Sicoli, M. A., Majid, A., & Levinson, S. C. (2009). The language of sound: II. In A. Majid (
Ed. ), Field manual volume 12 (pp. 14-19). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.446294.Abstract
The task is designed to elicit vocabulary for simple sounds. The primary goal is to establish how people describe sound and what resources the language provides generally for encoding this domain. More specifically: (1) whether there is dedicated vocabulary for encoding simple sound contrasts and (2) how much consistency there is within a community in descriptions. This develops on materials used in The language of sound -
Silva, S., Inácio, F., Rocha e Sousa, D., Gaspar, N., Folia, V., & Petersson, K. M. (2023). Formal language hierarchy reflects different levels of cognitive complexity. Journal of Experimental Psychology: Learning, Memory, and Cognition, 49(4), 642-660. doi:10.1037/xlm0001182.
Abstract
Formal language hierarchy describes levels of increasing syntactic complexity (adjacent dependencies, nonadjacent nested, nonadjacent crossed) of which the transcription into a hierarchy of cognitive complexity remains under debate. The cognitive foundations of formal language hierarchy have been contradicted by two types of evidence: First, adjacent dependencies are not easier to learn compared to nonadjacent; second, crossed nonadjacent dependencies may be easier than nested. However, studies providing these findings may have engaged confounds: Repetition monitoring strategies may have accounted for participants’ high performance in nonadjacent dependencies, and linguistic experience may have accounted for the advantage of crossed dependencies. We conducted two artificial grammar learning experiments where we addressed these confounds by manipulating reliance on repetition monitoring and by testing participants inexperienced with crossed dependencies. Results showed relevant differences in learning adjacent versus nonadjacent dependencies and advantages of nested over crossed, suggesting that formal language hierarchy may indeed translate into a hierarchy of cognitive complexity -
Silva-Nasser, C. G. A. d. (2023). A psycho- and sociolinguistics analysis of the dimensional properties of taboo words in carioca Portuguese. Revista de Estudos Linguísticos, 31(2), 809-860. doi:10.17851/2237-2083.31.2.809-860.
Abstract
Taboo words are emotional words which, in psycho and neurolinguistic studies, present higher attentional capture, are more memorable and complex to process.
Such phenomena are connected to dimensions such as arousal and valence, which reflect social, psychological and neurological aspects. The present study, the first of its kind in Brazilian Portuguese, aims to collect normative data in order to characterize what distinguish the processing of taboo words from other emotional words. The study crosses over to sociolinguistics by mapping linguistic attitudes towards taboo words, which are salient stylistic elements, subject to negative judgement, and strongly engage the sociolinguistic monitor. We aim to examine how certain aspects that may underlie beliefs and linguistic attitudes, such as gender, religiosity, habit of engaging in swearing, family tolerance and likelihood to take offense, modulate taboo word perception. Answers given by 164 university students from Rio de Janeiro to an explicit questionnaire about swear words were compared to less explicit judgements on 200 words in order to examine: (i) whether frequency, familiarity, valence, offensiveness, tabooness and arousal set taboo words apart from other categories (positive, negative and neutral words); (ii) the influence of participants’ sociocultural profile on such judgements, reflecting sociolinguistic monitoring. We observed that taboo words fall into a distinct category, mainly due to high social tabooness and offensiveness ratings, but also due to low familiarity and negative valence. These results confirm more negative linguistic attitudes regarding taboo words influenced by religiosity, family environment and gender, pertinent aspects to the understanding of these speakers’ linguistic identity. -
Simon-Thomas, E. R., Keltner, D. J., Sauter, D., Sinicropi-Yao, L., & Abramson, A. (2009). The voice conveys specific emotions: Evidence from vocal burst displays. Emotion, 9, 838-846. doi:10.1037/a0017810.
Abstract
Studies of emotion signaling inform claims about the taxonomic structure, evolutionary origins, and physiological correlates of emotions. Emotion vocalization research has tended to focus on a limited set of emotions: anger, disgust, fear, sadness, surprise, happiness, and for the voice, also tenderness. Here, we examine how well brief vocal bursts can communicate 22 different emotions: 9 negative (Study 1) and 13 positive (Study 2), and whether prototypical vocal bursts convey emotions more reliably than heterogeneous vocal bursts (Study 3). Results show that vocal bursts communicate emotions like anger, fear, and sadness, as well as seldom-studied states like awe, compassion, interest, and embarrassment. Ancillary analyses reveal family-wise patterns of vocal burst expression. Errors in classification were more common within emotion families (e.g., ‘self-conscious,’ ‘pro-social’) than between emotion families. The three studies reported highlight the voice as a rich modality for emotion display that can inform fundamental constructs about emotion. -
Skirgård, H., Haynie, H. J., Blasi, D. E., Hammarström, H., Collins, J., Latarche, J. J., Lesage, J., Weber, T., Witzlack-Makarevich, A., Passmore, S., Chira, A., Maurits, L., Dinnage, R., Dunn, M., Reesink, G., Singer, R., Bowern, C., Epps, P. L., Hill, J., Vesakoski, O. Skirgård, H., Haynie, H. J., Blasi, D. E., Hammarström, H., Collins, J., Latarche, J. J., Lesage, J., Weber, T., Witzlack-Makarevich, A., Passmore, S., Chira, A., Maurits, L., Dinnage, R., Dunn, M., Reesink, G., Singer, R., Bowern, C., Epps, P. L., Hill, J., Vesakoski, O., Robbeets, M., Abbas, N. K., Auer, D., Bakker, N. A., Barbos, G., Borges, R. D., Danielsen, S., Dorenbusch, L., Dorn, E., Elliott, J., Falcone, G., Fischer, J., Ghanggo Ate, Y., Gibson, H., Göbel, H.-P., Goodall, J. A., Gruner, V., Harvey, A., Hayes, R., Heer, L., Herrera Miranda, R. E., Hübler, N., Huntington-Rainey, B. H., Ivani, J. K., Johns, M., Just, E., Kashima, E., Kipf, C., Klingenberg, J. V., König, N., Koti, A., Kowalik, R. G. A., Krasnoukhova, O., Lindvall, N. L. M., Lorenzen, M., Lutzenberger, H., Martins, T. R., Mata German, C., Van der Meer, S., Montoya Samamé, J., Müller, M., Muradoglu, S., Neely, K., Nickel, J., Norvik, M., Oluoch, C. A., Peacock, J., Pearey, I. O., Peck, N., Petit, S., Pieper, S., Poblete, M., Prestipino, D., Raabe, L., Raja, A., Reimringer, J., Rey, S. C., Rizaew, J., Ruppert, E., Salmon, K. K., Sammet, J., Schembri, R., Schlabbach, L., Schmidt, F. W., Skilton, A., Smith, W. D., De Sousa, H., Sverredal, K., Valle, D., Vera, J., Voß, J., Witte, T., Wu, H., Yam, S., Ye, J., Yong, M., Yuditha, T., Zariquiey, R., Forkel, R., Evans, N., Levinson, S. C., Haspelmath, M., Greenhill, S. J., Atkinson, Q., & Gray, R. D. (2023). Grambank reveals the importance of genealogical constraints on linguistic diversity and highlights the impact of language loss. Science Advances, 9(16): eadg6175. doi:10.1126/sciadv.adg6175.
Abstract
While global patterns of human genetic diversity are increasingly well characterized, the diversity of human languages remains less systematically described. Here, we outline the Grambank database. With over 400,000 data points and 2400 languages, Grambank is the largest comparative grammatical database available. The comprehensiveness of Grambank allows us to quantify the relative effects of genealogical inheritance and geographic proximity on the structural diversity of the world’s languages, evaluate constraints on linguistic diversity, and identify the world’s most unusual languages. An analysis of the consequences of language loss reveals that the reduction in diversity will be strikingly uneven across the major linguistic regions of the world. Without sustained efforts to document and revitalize endangered languages, our linguistic window into human history, cognition, and culture will be seriously fragmented. -
Slaats, S., Weissbart, H., Schoffelen, J.-M., Meyer, A. S., & Martin, A. E. (2023). Delta-band neural responses to individual words are modulated by sentence processing. The Journal of Neuroscience, 43(26), 4867-4883. doi:10.1523/JNEUROSCI.0964-22.2023.
Abstract
To understand language, we need to recognize words and combine them into phrases and sentences. During this process, responses to the words themselves are changed. In a step towards understanding how the brain builds sentence structure, the present study concerns the neural readout of this adaptation. We ask whether low-frequency neural readouts associated with words change as a function of being in a sentence. To this end, we analyzed an MEG dataset by Schoffelen et al. (2019) of 102 human participants (51 women) listening to sentences and word lists, the latter lacking any syntactic structure and combinatorial meaning. Using temporal response functions and a cumulative model-fitting approach, we disentangled delta- and theta-band responses to lexical information (word frequency), from responses to sensory- and distributional variables. The results suggest that delta-band responses to words are affected by sentence context in time and space, over and above entropy and surprisal. In both conditions, the word frequency response spanned left temporal and posterior frontal areas; however, the response appeared later in word lists than in sentences. In addition, sentence context determined whether inferior frontal areas were responsive to lexical information. In the theta band, the amplitude was larger in the word list condition around 100 milliseconds in right frontal areas. We conclude that low-frequency responses to words are changed by sentential context. The results of this study speak to how the neural representation of words is affected by structural context, and as such provide insight into how the brain instantiates compositionality in language. -
Slim, M. S., & Hartsuiker, R. J. (2023). Moving visual world experiments online? A web-based replication of Dijkgraaf, Hartsuiker, and Duyck (2017) using PCIbex and WebGazer.js. Behavior Research Methods, 55, 3786-3804. doi:10.3758/s13428-022-01989-z.
Abstract
The visual world paradigm is one of the most influential paradigms to study real-time language processing. The present study tested whether visual world studies can be moved online, using PCIbex software (Zehr & Schwarz, 2018) and the WebGazer.js algorithm (Papoutsaki et al., 2016) to collect eye-movement data. Experiment 1 was a fixation task in which the participants looked at a fixation cross in multiple positions on the computer screen. Experiment 2 was a web-based replication of a visual world experiment by Dijkgraaf et al. (2017). Firstly, both experiments revealed that the spatial accuracy of the data allowed us to distinguish looks across the four quadrants of the computer screen. This suggest that the spatial resolution of WebGazer.js is fine-grained enough for most visual world experiments (which typically involve a two-by-two quadrant-based set-up of the visual display). Secondly, both experiments revealed a delay of roughly 300 ms in the time course of the eye movements, possibly caused by the internal processing speed of the browser or WebGazer.js. This delay can be problematic in studying questions that require a fine-grained temporal resolution and requires further investigation. -
Slim, M. S., Lauwers, P., & Hartsuiker, R. J. (2023). How abstract are logical representations? The role of verb semantics in representing quantifier scope. Glossa Psycholinguistics, 2(1): 9. doi:10.5070/G6011175.
Abstract
Language comprehension involves the derivation of the meaning of sentences by combining the meanings of their parts. In some cases, this can lead to ambiguity. A sentence like Every hiker climbed a hill allows two logical representations: One that specifies that every hiker climbed a different hill and one that specifies that every hiker climbed the same hill. The interpretations of such sentences can be primed: Exposure to a particular reading increases the likelihood that the same reading will be assigned to a subsequent similar sentence. Feiman and Snedeker (2016) observed that such priming is not modulated by overlap of the verb between prime and target. This indicates that mental logical representations specify the compositional structure of the sentence meaning without conceptual meaning content. We conducted a close replication of Feiman and Snedeker’s experiment in Dutch and found no verb-independent priming. Moreover, a comparison with a previous, within-verb priming experiment showed an interaction, suggesting stronger verb-specific than abstract priming. A power analysis revealed that both Feiman and Snedeker’s experiment and our Experiment 1 were underpowered. Therefore, we replicated our Experiment 1, using the sample size guidelines provided by our power analysis. This experiment again showed that priming was stronger if a prime-target pair contained the same verb. Together, our experiments show that logical representation priming is enhanced if the prime and target sentence contain the same verb. This suggests that logical representations specify compositional structure and meaning features in an integrated manner. -
Snijders, T. M., Vosse, T., Kempen, G., Van Berkum, J. J. A., Petersson, K. M., & Hagoort, P. (2009). Retrieval and unification of syntactic structure in sentence comprehension: An fMRI study using word-category ambiguity. Cerebral Cortex, 19, 1493-1503. doi:10.1093/cercor/bhn187.
Abstract
Sentence comprehension requires the retrieval of single word information from long-term memory, and the integration of this information into multiword representations. The current functional magnetic resonance imaging study explored the hypothesis that the left posterior temporal gyrus supports the retrieval of lexical-syntactic information, whereas left inferior frontal gyrus (LIFG) contributes to syntactic unification. Twenty-eight subjects read sentences and word sequences containing word-category (noun–verb) ambiguous words at critical positions. Regions contributing to the syntactic unification process should show enhanced activation for sentences compared to words, and only within sentences display a larger signal for ambiguous than unambiguous conditions. The posterior LIFG showed exactly this predicted pattern, confirming our hypothesis that LIFG contributes to syntactic unification. The left posterior middle temporal gyrus was activated more for ambiguous than unambiguous conditions (main effect over both sentences and word sequences), as predicted for regions subserving the retrieval of lexical-syntactic information from memory. We conclude that understanding language involves the dynamic interplay between left inferior frontal and left posterior temporal regions. -
Snijders Blok, L., Verseput, J., Rots, D., Venselaar, H., Innes, A. M., Stumpel, C., Õunap, K., Reinson, K., Seaby, E. G., McKee, S., Burton, B., Kim, K., Van Hagen, J. M., Waisfisz, Q., Joset, P., Steindl, K., Rauch, A., Li, D., Zackai, E. H., Sheppard, S. E. and 29 moreSnijders Blok, L., Verseput, J., Rots, D., Venselaar, H., Innes, A. M., Stumpel, C., Õunap, K., Reinson, K., Seaby, E. G., McKee, S., Burton, B., Kim, K., Van Hagen, J. M., Waisfisz, Q., Joset, P., Steindl, K., Rauch, A., Li, D., Zackai, E. H., Sheppard, S. E., Keena, B., Hakonarson, H., Roos, A., Kohlschmidt, N., Cereda, A., Iascone, M., Rebessi, E., Kernohan, K. D., Campeau, P. M., Millan, F., Taylor, J. A., Lochmüller, H., Higgs, M. R., Goula, A., Bernhard, B., Velasco, D. J., Schmanski, A. A., Stark, Z., Gallacher, L., Pais, L., Marcogliese, P. C., Yamamoto, S., Raun, N., Jakub, T. E., Kramer, J. M., Den Hoed, J., Fisher, S. E., Brunner, H. G., & Kleefstra, T. (2023). A clustering of heterozygous missense variants in the crucial chromatin modifier WDR5 defines a new neurodevelopmental disorder. Human Genetics and Genomics Advances, 4(1): 100157. doi:10.1016/j.xhgg.2022.100157.
Abstract
WDR5 is a broadly studied, highly conserved key protein involved in a wide array of biological functions. Among these functions, WDR5 is a part of several protein complexes that affect gene regulation via post-translational modification of histones. We collected data from 11 unrelated individuals with six different rare de novo germline missense variants in WDR5; one identical variant was found in five individuals, and another variant in two individuals. All individuals had neurodevelopmental disorders including speech/language delays (N=11), intellectual disability (N=9), epilepsy (N=7) and autism spectrum disorder (N=4). Additional phenotypic features included abnormal growth parameters (N=7), heart anomalies (N=2) and hearing loss (N=2). Three-dimensional protein structures indicate that all the residues affected by these variants are located at the surface of one side of the WDR5 protein. It is predicted that five out of the six amino acid substitutions disrupt interactions of WDR5 with RbBP5 and/or KMT2A/C, as part of the COMPASS (complex proteins associated with Set1) family complexes. Our experimental approaches in Drosophila melanogaster and human cell lines show normal protein expression, localization and protein-protein interactions for all tested variants. These results, together with the clustering of variants in a specific region of WDR5 and the absence of truncating variants so far, suggest that dominant-negative or gain-of-function mechanisms might be at play. All in all, we define a neurodevelopmental disorder associated with missense variants in WDR5 and a broad range of features. This finding highlights the important role of genes encoding COMPASS family proteins in neurodevelopmental disorders. -
Snowdon, C. T., & Cronin, K. A. (2009). Comparative cognition and neuroscience. In G. Berntson, & J. Cacioppo (
Eds. ), Handbook of neuroscience for the behavioral sciences (pp. 32-55). Hoboken, NJ: Wiley. -
Söderström, P., & Cutler, A. (2023). Early neuro-electric indication of lexical match in English spoken-word recognition. PLOS ONE, 18(5): e0285286. doi:10.1371/journal.pone.0285286.
Abstract
We investigated early electrophysiological responses to spoken English words embedded in neutral sentence frames, using a lexical decision paradigm. As words unfold in time, similar-sounding lexical items compete for recognition within 200 milliseconds after word onset. A small number of studies have previously investigated event-related potentials in this time window in English and French, with results differing in direction of effects as well as component scalp distribution. Investigations of spoken-word recognition in Swedish have reported an early left-frontally distributed event-related potential that increases in amplitude as a function of the probability of a successful lexical match as the word unfolds. Results from the present study indicate that the same process may occur in English: we propose that increased certainty of a ‘word’ response in a lexical decision task is reflected in the amplitude of an early left-anterior brain potential beginning around 150 milliseconds after word onset. This in turn is proposed to be connected to the probabilistically driven activation of possible upcoming word forms.Additional information
The datasets are available here -
Soheili-Nezhad, S., Sprooten, E., Tendolkar, I., & Medici, M. (2023). Exploring the genetic link between thyroid dysfunction and common psychiatric disorders: A specific hormonal or a general autoimmune comorbidity. Thyroid, 33(2), 159-168. doi:10.1089/thy.2022.0304.
Abstract
Background: The hypothalamus-pituitary-thyroid axis coordinates brain development and postdevelopmental function. Thyroid hormone (TH) variations, even within the normal range, have been associated with the risk of developing common psychiatric disorders, although the underlying mechanisms remain poorly understood.
Methods: To get new insight into the potentially shared mechanisms underlying thyroid dysfunction and psychiatric disorders, we performed a comprehensive analysis of multiple phenotypic and genotypic databases. We investigated the relationship of thyroid disorders with depression, bipolar disorder (BIP), and anxiety disorders (ANXs) in 497,726 subjects from U.K. Biobank. We subsequently investigated genetic correlations between thyroid disorders, thyrotropin (TSH), and free thyroxine (fT4) levels, with the genome-wide factors that predispose to psychiatric disorders. Finally, the observed global genetic correlations were furthermore pinpointed to specific local genomic regions.
Results: Hypothyroidism was positively associated with an increased risk of major depressive disorder (MDD; OR = 1.31, p = 5.29 × 10−89), BIP (OR = 1.55, p = 0.0038), and ANX (OR = 1.16, p = 6.22 × 10−8). Hyperthyroidism was associated with MDD (OR = 1.11, p = 0.0034) and ANX (OR = 1.34, p = 5.99 × 10−⁶). Genetically, strong coheritability was observed between thyroid disease and both major depressive (rg = 0.17, p = 2.7 × 10−⁴) and ANXs (rg = 0.17, p = 6.7 × 10−⁶). This genetic correlation was particularly strong at the major histocompatibility complex locus on chromosome 6 (p < 10−⁵), but further analysis showed that other parts of the genome also contributed to this global effect. Importantly, neither TSH nor fT4 levels were genetically correlated with mood disorders.
Conclusions: Our findings highlight an underlying association between autoimmune hypothyroidism and mood disorders, which is not mediated through THs and in which autoimmunity plays a prominent role. While these findings could shed new light on the potential ineffectiveness of treating (minor) variations in thyroid function in psychiatric disorders, further research is needed to identify the exact underlying molecular mechanisms.Additional information
supplementary table S1 -
Sollis, E., Den Hoed, J., Quevedo, M., Estruch, S. B., Vino, A., Dekkers, D. H. W., Demmers, J. A. A., Poot, R., Derizioti, P., & Fisher, S. E. (2023). Characterization of the TBR1 interactome: Variants associated with neurodevelopmental disorders disrupt novel protein interactions. Human Molecular Genetics, 32(9): ddac311, pp. 1497-1510. doi:10.1093/hmg/ddac311.
Abstract
TBR1 is a neuron-specific transcription factor involved in brain development and implicated in a neurodevelopmental disorder (NDD) combining features of autism spectrum disorder (ASD), intellectual disability (ID) and speech delay. TBR1 has been previously shown to interact with a small number of transcription factors and co-factors also involved in NDDs (including CASK, FOXP1/2/4 and BCL11A), suggesting that the wider TBR1 interactome may have a significant bearing on normal and abnormal brain development. Here we have identified approximately 250 putative TBR1-interaction partners by affinity purification coupled to mass spectrometry. As well as known TBR1-interactors such as CASK, the identified partners include transcription factors and chromatin modifiers, along with ASD- and ID-related proteins. Five interaction candidates were independently validated using bioluminescence resonance energy transfer assays. We went on to test the interaction of these candidates with TBR1 protein variants implicated in cases of NDD. The assays uncovered disturbed interactions for NDD-associated variants and identified two distinct protein-binding domains of TBR1 that have essential roles in protein–protein interaction. -
Stärk, K., Kidd, E., & Frost, R. L. A. (2023). Close encounters of the word kind: Attested distributional information boosts statistical learning. Language Learning, 73(2), 341-373. doi:10.1111/lang.12523.
Abstract
Statistical learning, the ability to extract regularities from input (e.g., in language), is likely supported by learners’ prior expectations about how component units co-occur. In this study, we investigated how adults’ prior experience with sublexical regularities in their native language influences performance on an empirical language learning task. Forty German-speaking adults completed a speech repetition task in which they repeated eight-syllable sequences from two experimental languages: one containing disyllabic words comprised of frequently occurring German syllable transitions (naturalistic words) and the other containing words made from unattested syllable transitions (non-naturalistic words). The participants demonstrated learning from both naturalistic and non-naturalistic stimuli. However, learning was superior for the naturalistic sequences, indicating that the participants had used their existing distributional knowledge of German to extract the naturalistic words faster and more accurately than the non-naturalistic words. This finding supports theories of statistical learning as a form of chunking, whereby frequently co-occurring units become entrenched in long-term memory. -
Stehouwer, H., & van Zaanen, M. (2009). Language models for contextual error detection and correction. In Proceedings of the EACL 2009 Workshop on Computational Linguistic Aspects of Grammatical Inference (pp. 41-48). Association for Computational Linguistics.
Abstract
The problem of identifying and correcting confusibles, i.e. context-sensitive spelling errors, in text is typically tackled using specifically trained machine learning classifiers. For each different set of confusibles, a specific classifier is trained and tuned. In this research, we investigate a more generic approach to context-sensitive confusible correction. Instead of using specific classifiers, we use one generic classifier based on a language model. This measures the likelihood of sentences with different possible solutions of a confusible in place. The advantage of this approach is that all confusible sets are handled by a single model. Preliminary results show that the performance of the generic classifier approach is only slightly worse that that of the specific classifier approach -
Stehouwer, H., & Van Zaanen, M. (2009). Token merging in language model-based confusible disambiguation. In T. Calders, K. Tuyls, & M. Pechenizkiy (
Eds. ), Proceedings of the 21st Benelux Conference on Artificial Intelligence (pp. 241-248).Abstract
In the context of confusible disambiguation (spelling correction that requires context), the synchronous back-off strategy combined with traditional n-gram language models performs well. However, when alternatives consist of a different number of tokens, this classification technique cannot be applied directly, because the computation of the probabilities is skewed. Previous work already showed that probabilities based on different order n-grams should not be compared directly. In this article, we propose new probability metrics in which the size of the n is varied according to the number of tokens of the confusible alternative. This requires access to n-grams of variable length. Results show that the synchronous back-off method is extremely robust. We discuss the use of suffix trees as a technique to store variable length n-gram information efficiently. -
Stern, G. (2023). On embodied use of recognitional demonstratives. In W. Pouw, J. Trujillo, H. R. Bosker, L. Drijvers, M. Hoetjes, J. Holler, S. Kadava, L. Van Maastricht, E. Mamus, & A. Ozyurek (
Eds. ), Gesture and Speech in Interaction (GeSpIn) Conference. doi:10.17617/2.3527204.Abstract
This study focuses on embodied uses of recognitional
demonstratives. While multimodal conversation analytic
studies have shown how gesture and speech interact in the
elaboration of exophoric references, little attention has been
given to the multimodal configuration of other types of
referential actions. Based on a video-recorded corpus of
professional meetings held in French, this qualitative study
shows that a subtype of deictic references, namely recognitional
references, are frequently associated with iconic gestures, thus
challenging the traditional distinction between exophoric and
endophoric uses of deixis. -
Stewart, A. J., Kidd, E., & Haigh, M. (2009). Early sensitivity to discourse-level anomalies: Evidence from self-paced reading. Discourse Processes, 46(1), 46-69. doi:10.1080/01638530802629091.
Abstract
Two word-by-word, self-paced reading experiments investigated the speed with which readers were sensitive to discourse-level anomalies. An account arguing for delayed sensitivity (Guzman & Klin, 2000 Guzman, A. E. and Klin, C. M. 2000. Maintaining global coherence in reading: The role of sentence boundaries.. Memory & Cognition, 28: 722–730. [PubMed], [Web of Science ®], [Google Scholar]) was contrasted with one allowing for rapid sensitivity (Myers & O'Brien, 1998 Myers, J. L. and O'Brien, E. J. 1998. Accessing the discourse representation during reading.. Discourse Processes, 26: 131–157. [Taylor & Francis Online], [Web of Science ®], [Google Scholar]). Anomalies related to spatial information (Experiment 1) and character-attribute information (Experiment 2) were examined. Both experiments found that readers displayed rapid sensitivity to the anomalous information. A reading time penalty was observed for the region of text containing the anomalous information. This finding is most compatible with an account of text processing whereby incoming words are rapidly evaluated with respect to prior context. They are not consistent with an account that argues for delayed integration. Results are discussed in light of their implications for competing models of text processing.
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