Publications

Displaying 601 - 700 of 779
  • Schür, R. R., Schijven, D., Boks, M. P., Rutten, B. P., Stein, M. B., Veldink, J. H., Joëls, M., Geuze, E., Vermetten, E., Luykx, J. J., & Vinkers, C. H. (2019). The effect of genetic vulnerability and military deployment on the development of post-traumatic stress disorder and depressive symptoms. European Neuropsychopharmacology, 29(3), 405-415. doi:10.1016/j.euroneuro.2018.12.009.

    Abstract

    Exposure to trauma strongly increases the risk to develop stress-related psychopathology, such as post-traumatic stress disorder (PTSD) or major depressive disorder (MDD). In addition, liability to develop these moderately heritable disorders is partly determined by common genetic variance, which is starting to be uncovered by genome-wide association studies (GWASs). However, it is currently unknown to what extent genetic vulnerability and trauma interact. We investigated whether genetic risk based on summary statistics of large GWASs for PTSD and MDD predisposed individuals to report an increase in MDD and PTSD symptoms in a prospective military cohort (N = 516) at five time points after deployment to Afghanistan: one month, six months and one, two and five years. Linear regression was used to analyze the contribution of polygenic risk scores (PRSs, at multiple p-value thresholds) and their interaction with deployment-related trauma to the development of PTSD- and depression-related symptoms. We found no main effects of PRSs nor evidence for interactions with trauma on the development of PTSD or depressive symptoms at any of the time points in the five years after military deployment. Our results based on a unique long-term follow-up of a deployed military cohort suggest limited validity of current PTSD and MDD polygenic risk scores, albeit in the presence of minimal severe psychopathology in the target cohort. Even though the predictive value of PRSs will likely benefit from larger sample sizes in discovery and target datasets, progress will probably also depend on (endo)phenotype refinement that in turn will reduce etiological heterogeneity.
  • Scurry, A. N., Vercillo, T., Nicholson, A., Webster, M., & Jiang, F. (2019). Aging impairs temporal sensitivity, but not perceptual synchrony, across modalities. Multisensory Research, 32(8), 671-692. doi:10.1163/22134808-20191343.

    Abstract

    Encoding the temporal properties of external signals that comprise multimodal events is a major factor guiding everyday experience. However, during the natural aging process, impairments to sensory processing can profoundly affect multimodal temporal perception. Various mechanisms can contribute to temporal perception, and thus it is imperative to understand how each can be affected by age. In the current study, using three different temporal order judgement tasks (unisensory, multisensory, and sensorimotor), we investigated the effects of age on two separate temporal processes: synchronization and integration of multiple signals. These two processes rely on different aspects of temporal information, either the temporal alignment of processed signals or the integration/segregation of signals arising from different modalities, respectively. Results showed that the ability to integrate/segregate multiple signals decreased with age regardless of the task, and that the magnitude of such impairment correlated across tasks, suggesting a widespread mechanism affected by age. In contrast, perceptual synchrony remained stable with age, revealing a distinct intact mechanism. Overall, results from this study suggest that aging has differential effects on temporal processing, and general impairments with aging may impact global temporal sensitivity while context-dependent processes remain unaffected.

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  • Seidlmayer, E., Galke, L., Melnychuk, T., Schultz, C., Tochtermann, K., & Förstner, K. U. (2019). Take it personally - A Python library for data enrichment for infometrical applications. In M. Alam, R. Usbeck, T. Pellegrini, H. Sack, & Y. Sure-Vetter (Eds.), Proceedings of the Posters and Demo Track of the 15th International Conference on Semantic Systems co-located with 15th International Conference on Semantic Systems (SEMANTiCS 2019).

    Abstract

    Like every other social sphere, science is influenced by individual characteristics of researchers. However, for investigations on scientific networks, only little data about the social background of researchers, e.g. social origin, gender, affiliation etc., is available.
    This paper introduces ”Take it personally - TIP”, a conceptual model and library currently under development, which aims to support the
    semantic enrichment of publication databases with semantically related background information which resides elsewhere in the (semantic) web, such as Wikidata.
    The supplementary information enriches the original information in the publication databases and thus facilitates the creation of complex scientific knowledge graphs. Such enrichment helps to improve the scientometric analysis of scientific publications as they can also take social backgrounds of researchers into account and to understand social structure in research communities.
  • Seijdel, N., Sakmakidis, N., De Haan, E. H. F., Bohte, S. M., & Scholte, H. S. (2019). Implicit scene segmentation in deeper convolutional neural networks. In Proceedings of the 2019 Conference on Cognitive Computational Neuroscience (pp. 1059-1062). doi:10.32470/CCN.2019.1149-0.

    Abstract

    Feedforward deep convolutional neural networks (DCNNs) are matching and even surpassing human performance on object recognition. This performance suggests that activation of a loose collection of image
    features could support the recognition of natural object categories, without dedicated systems to solve specific visual subtasks. Recent findings in humans however, suggest that while feedforward activity may suffice for
    sparse scenes with isolated objects, additional visual operations ('routines') that aid the recognition process (e.g. segmentation or grouping) are needed for more complex scenes. Linking human visual processing to
    performance of DCNNs with increasing depth, we here explored if, how, and when object information is differentiated from the backgrounds they appear on. To this end, we controlled the information in both objects
    and backgrounds, as well as the relationship between them by adding noise, manipulating background congruence and systematically occluding parts of the image. Results indicated less distinction between object- and background features for more shallow networks. For those networks, we observed a benefit of training on segmented objects (as compared to unsegmented objects). Overall, deeper networks trained on natural
    (unsegmented) scenes seem to perform implicit 'segmentation' of the objects from their background, possibly by improved selection of relevant features.
  • Sekine, K., Stam, G., Yoshioka, K., Tellier, M., & Capirci, O. (2015). Cross-linguistic views of gesture usage. Vigo International Journal of Applied linguistics VIAL, (12), 91-105.

    Abstract

    People have stereotypes about gesture usage. For instance, speakers in East Asia are not supposed to gesticulate, and it is believed that Italians gesticulate more than the British. Despite the prevalence of such views, studies that investigate these stereotypes are scarce. The present study examined peopleÕs views on spontaneous gestures by collecting data from five different countries. A total of 363 undergraduate students from five countries (France, Italy, Japan, the Netherlands and USA) participated in this study. Data were collected through a two-part questionnaire. Part 1 asked participants to rate two characteristics of gesture: frequency and size of gesture for 13 different languages. Part 2 asked them about their views on factors that might affect the production of gestures. The results showed that most participants in this study believe that Italian, Spanish, and American English speakers produce larger gestures more frequently than other language speakers. They also showed that each culture group, even within Europe, put weight on a slightly different aspect of gestures.
  • Sekine, K., & Kita, S. (2015). Development of multimodal discourse comprehension: Cohesive use of space by gestures. Language, Cognition and Neuroscience, 30(10), 1245-1258. doi:10.1080/23273798.2015.1053814.

    Abstract

    This study examined how well 5-, 6-, 10-year-olds and adults integrated information from spoken discourse with cohesive use of space in gesture, in comprehension. In Experiment 1, participants were presented with a combination of spoken discourse and a sequence of cohesive gestures, which consistently located each of the two protagonists in two distinct locations in gesture space. Participants were asked to select an interpretation of the final sentence that best matched the preceding spoken and gestural contexts. Adults and 10-year-olds performed better than 5-year-olds, who were at chance level. In Experiment 2, another group of 5-year-olds was presented with the same stimuli as in Experiment 1, except that the actor showed hand-held pictures, instead of producing cohesive gestures. Unlike cohesive gestures, one set of pictures was self-explanatory and did not require integration with the concurrent speech to derive the referent. With these pictures, 5-year-olds performed nearly perfectly and their performance in the identifiable pictures was significantly better than those in the unidentifiable pictures. These results suggest that young children failed to integrate spoken discourse and cohesive use of space in gestures, because they cannot derive a referent of cohesive gestures from the local speech context.
  • Sekine, K., Snowden, H., & Kita, S. (2015). The development of the ability to semantically integrate information in speech and iconic gesture in comprehension. Cognitive Science. doi:10.1111/cogs.12221.

    Abstract

    We examined whether children's ability to integrate speech and gesture follows the pattern of a broader developmental shift between 3- and 5-year-old children (Ramscar & Gitcho, 2007) regarding the ability to process two pieces of information simultaneously. In Experiment 1, 3-year-olds, 5-year-olds, and adults were presented with either an iconic gesture or a spoken sentence or a combination of the two on a computer screen, and they were instructed to select a photograph that best matched the message. The 3-year-olds did not integrate information in speech and gesture, but 5-year-olds and adults did. In Experiment 2, 3-year-old children were presented with the same speech and gesture as in Experiment 1 that were produced live by an experimenter. When presented live, 3-year-olds could integrate speech and gesture. We concluded that development of the integration ability is a part of the broader developmental shift; however, live-presentation facilitates the nascent integration ability in 3-year-olds.
  • Sekine, K., & Kita, S. (2015). The parallel development of the form and meaning of two-handed gestures and linguistic information packaging within a clause in narrative. Open Linguistics, 1(1), 490-502. doi:10.1515/opli-2015-0015.

    Abstract

    We examined how two-handed gestures and speech with equivalent contents that are used in narrative develop during childhood. The participants were 40 native speakers of English consisting of four different age groups: 3-, 5-, 9-year-olds, and adults. A set of 10 video clips depicting motion events were used to elicit speech and gesture. There are two findings. First, two types of two-handed gestures showed different developmental changes: those with a single-handed stroke with a simultaneous hold increased with age, while those with a two handed-stroke decreased with age. Second, representational gesture and speech developed in parallel at the discourse level. More specifically, the ways in which information is packaged in a gesture and in a clause are similar for a given age group; that is, gesture and speech develop hand-in-hand.
  • Senft, G. (2015). Tales from the Trobriand Islands of Papua New Guinea: Psycholinguistic and anthropological linguistic analyses of tales told by Trobriand children and adults. Amsterdam: John Benjamins.

    Abstract

    This volume presents 22 tales from the Trobriand Islands told by children (boys between the age of 5 and 9 years) and adults. The monograph is motivated not only by the anthropological linguistic aim to present a broad and quite unique collection of tales with the thematic approach to illustrate which topics and themes constitute the content of the stories, but also by the psycholinguistic and textlinguistic questions of how children acquire linearization and other narrative strategies, how they develop them and how they use them to structure these texts in an adult-like way. The tales are presented in morpheme-interlinear transcriptions with first textlinguistic analyses and cultural background information necessary to fully understand them. A summarizing comparative analysis of the texts from a psycholinguistic, anthropological linguistic and philological point of view discusses the underlying schemata of the stories, the means narrators use to structure them, their structural complexity and their cultural specificity. The e-book is made available under a CC BY-NC-ND 4.0 license.
  • Senft, G. (2019). Rituelle Kommunikation. In F. Liedtke, & A. Tuchen (Eds.), Handbuch Pragmatik (pp. 423-430). Stuttgart: J. B. Metzler. doi:10.1007/978-3-476-04624-6_41.

    Abstract

    Die Sprachwissenschaft hat den Begriff und das Konzept ›Rituelle Kommunikation‹ von der vergleichenden Verhaltensforschung übernommen. Humanethologen unterscheiden eine Reihe von sogenannten ›Ausdrucksbewegungen‹, die in der Mimik, der Gestik, der Personaldistanz (Proxemik) und der Körperhaltung (Kinesik) zum Ausdruck kommen. Viele dieser Ausdrucksbewegungen haben sich zu spezifischen Signalen entwickelt. Ethologen definieren Ritualisierung als Veränderung von Verhaltensweisen im Dienst der Signalbildung. Die zu Signalen ritualisierten Verhaltensweisen sind Rituale. Im Prinzip kann jede Verhaltensweise zu einem Signal werden, entweder im Laufe der Evolution oder durch Konventionen, die in einer bestimmten Gemeinschaft gültig sind, die solche Signale kulturell entwickelt hat und die von ihren Mitgliedern tradiert und gelernt werden.
  • Senft, G. (2015). The Trobriand Islanders' concept of karewaga. In S. Lestrade, P. de Swart, & L. Hogeweg (Eds.), Addenda. Artikelen voor Ad Foolen (pp. 381-390). Nijmegen: Radboud University.
  • Seuren, P. A. M. (2015). Prestructuralist and structuralist approaches to syntax. In T. Kiss, & A. Alexiadou (Eds.), Syntax--theory and analysis: An international handbook (pp. 134-157). Berlin: Mouton de Gruyter.
  • Seuren, P. A. M. (2015). Taal is complexer dan je denkt - recursief. In S. Lestrade, P. De Swart, & L. Hogeweg (Eds.), Addenda. Artikelen voor Ad Foolen (pp. 393-400). Nijmegen: Radboud University.
  • Seuren, P. A. M. (2015). Unconscious elements in linguistic communication: Language and social reality. Empedocles: European Journal for the Philosophy of Communication, 6, 185-194. doi:10.1386/ejpc.6.2.185_1.

    Abstract

    The message of the present article is, first, that, besides and below the strictly linguistic aspects of communication through language, of which speakers are in principle fully aware, a great deal of knowledge not carried in virtue of the system of the language in question but rather transmitted by the form of the intended message, is imparted to listeners or readers, without either being in the least aware of this happening. For example, listeners quickly register the social status, regional origin or emotional attitude of speakers and they react to those kinds of ‘paralinguistic’ information, mostly totally unawares. When speaker and listener have a positive attitude with regard to each other, the reaction consists, among other things, in mutual alignment or accommodation of pronunciation features, lexical selections and style of speaking. When the mutual attitude is negative, the opposite happens: speakers accentuate their differences. Then, when this happens not between individual interlocutors but between groups of speakers, such accommodation or divergence phenomena may lead to language change. The main theoretical question raised, but not answered, in this article is how and at what point forms of behaviour, including linguistic behaviour, achieve the status of being ‘standard’ or ‘accepted’ in any given community and what it means to say that they are ‘standard’ or ‘accepted’. It is argued that frequency of occurrence is not the main explanatory factor, and that a causal explanation is to be sought rather in the, often unconscious, attitudes of individuals, in particular their desire or need to be integrated members of a community or social group, thus ensuring their safety and asserting their group identity. The question thus belongs to the province of social psychology. Qualms about analyses of this kind being ‘unscientific’ dissipate when it is realized that consciousness phenomena are part of the real world and must therefore be considered to be valid objects of scientific theory formation. Like so many other ill-understood elements in scientific theories, consciousness, though itself unexplained, can be given a place in causal chains of events.
  • Seyfeddinipur, M., Ameka, F., Bolton, L., Blumtritt, J., Carpenter, B., Cruz, H., Drude, S., Epps, P. L., Ferreira, V., Galucio, A. V., Hellwig, B., Hinte, O., Holton, G., Jung, D., Buddeberg, I. K., Krifka, M., Kung, S., Monroig, M., Neba, A. N., Nordhoff, S. and 10 moreSeyfeddinipur, M., Ameka, F., Bolton, L., Blumtritt, J., Carpenter, B., Cruz, H., Drude, S., Epps, P. L., Ferreira, V., Galucio, A. V., Hellwig, B., Hinte, O., Holton, G., Jung, D., Buddeberg, I. K., Krifka, M., Kung, S., Monroig, M., Neba, A. N., Nordhoff, S., Pakendorf, B., Von Prince, K., Rau, F., Rice, K., Riessler, M., Szoelloesi Brenig, V., Thieberger, N., Trilsbeek, P., Van der Voort, H., & Woodbury, T. (2019). Public access to research data in language documentation: Challenges and possible strategies. Language Documentation and Conservation, 13, 545-563. Retrieved from http://hdl.handle.net/10125/24901.

    Abstract

    The Open Access Movement promotes free and unfettered access to research publications and, increasingly, to the primary data which underly those publications. As the field of documentary linguistics seeks to record and preserve culturally and linguistically relevant materials, the question of how openly accessible these materials should be becomes increasingly important. This paper aims to guide researchers and other stakeholders in finding an appropriate balance between accessibility and confidentiality of data, addressing community questions and legal, institutional, and intellectual issues that pose challenges to accessible data.
  • Seymour, R. A., Rippon, G., Goordin-Williams, G., Schoffelen, J.-M., & Kessler, K. (2019). Dysregulated oscillatory connectivity in thevisual system in autism spectrum disorder. Brain, 142(10), 3294-3305. doi:10.1093/brain/awz214.

    Abstract

    Autism spectrum disorder is increasingly associated with atypical perceptual and sensory symptoms. Here we explore the hypothesis
    that aberrant sensory processing in autism spectrum disorder could be linked to atypical intra- (local) and interregional (global)
    brain connectivity. To elucidate oscillatory dynamics and connectivity in the visual domain we used magnetoencephalography and
    a simple visual grating paradigm with a group of 18 adolescent autistic participants and 18 typically developing control subjects.
    Both groups showed similar increases in gamma (40–80 Hz) and decreases in alpha (8–13 Hz) frequency power in occipital cortex.
    However, systematic group differences emerged when analysing intra- and interregional connectivity in detail. First, directed
    connectivity was estimated using non-parametric Granger causality between visual areas V1 and V4. Feedforward V1-to-V4
    connectivity, mediated by gamma oscillations, was equivalent between autism spectrum disorder and control groups, but importantly,
    feedback V4-to-V1 connectivity, mediated by alpha (8–13 Hz) oscillations, was significantly reduced in the autism spectrum
    disorder group. This reduction was positively correlated with autistic quotient scores, consistent with an atypical visual hierarchy
    in autism, characterized by reduced top-down modulation of visual input via alpha-band oscillations. Second, at the local level in
    V1, coupling of alpha-phase to gamma amplitude (alpha-gamma phase amplitude coupling) was reduced in the autism spectrum
    disorder group. This implies dysregulated local visual processing, with gamma oscillations decoupled from patterns of wider alphaband
    phase synchrony (i.e. reduced phase amplitude coupling), possibly due to an excitation-inhibition imbalance. More generally,
    these results are in agreement with predictive coding accounts of neurotypical perception and indicate that visual processes in
    autism are less modulated by contextual feedback information.
  • Sha, Z., Wager, T. D., Mechelli, A., & He, Y. (2019). Common Dysfunction of Large-Scale Neurocognitive Networks Across Psychiatric Disorders. Biological Psychiatry, 85(5), 379-388. doi:10.1016/j.biopsych.2018.11.011.

    Abstract

    Background Cognitive dysfunction is one of the most prominent characteristics of psychiatric disorders. At present, the neural correlates of cognitive dysfunction across psychiatric disorders are poorly understood. The aim of this study was to investigate functional connectivity and structural perturbations across psychiatric diagnoses in three neurocognitive networks of interest, including the default-mode (DMN), the frontoparietal (FPN) and the salience network (SN). Methods We performed meta-analyses of resting-state functional MRI (R-fMRI) whole-brain seed-based functional connectivity in 8,298 patients (involving 8 disorders) and 8,165 healthy controls and a voxel-based morphometry analysis of structural MRI data in 14,027 patients (involving 8 disorders) and healthy 14,504 controls. To aid the interpretation of the results, we examined neurocognitive function in 776 healthy participants from the Human Connectome Project. Results We found that the three neurocognitive networks of interest were characterized by shared alterations of functional connectivity architecture across psychiatric disorders. More specifically, hypoconnectivity was expressed between the DMN and ventral SN and between the SN and FPN, whereas hyperconnectivity was evident between the DMN and FPN and between the DMN and dorsal SN. This pattern of network alterations was associated with gray matter reductions in patients, and was localized in regions that subserve general cognitive performance. Conclusions This study is the first to provide meta-analytic evidence of common alterations of functional connectivity within and between neurocognitive networks. The findings suggest a shared mechanism of network interactions that may associate with the generalized cognitive deficits observed in psychiatric disorders.

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  • Shao, Z., Van Paridon, J., Poletiek, F. H., & Meyer, A. S. (2019). Effects of phrase and word frequencies in noun phrase production. Journal of Experimental Psychology: Learning, Memory, and Cognition, 45(1), 147-165. doi:10.1037/xlm0000570.

    Abstract

    There is mounting evidence that the ease of producing and understanding language depends not only on the frequencies of individual words but also on the frequencies of word combinations. However, in two picture description experiments, Janssen and Barber (2012) found that French and Spanish speakers' speech onset latencies for short phrases depended exclusively on the frequencies of the phrases but not on the frequencies of the individual words. They suggested that speakers retrieved phrase-sized units from the mental lexicon. In the present study, we examined whether the time required to plan complex noun phrases in Dutch would likewise depend only on phrase frequencies. Participants described line drawings in phrases such as rode schoen [red shoe] (Experiments 1 and 2) or de rode schoen [the red shoe] (Experiment 3). Replicating Janssen and Barber's findings, utterance onset latencies depended on the frequencies of the phrases but, deviating from their findings, also depended on the frequencies of the adjectives in adjective-noun phrases and the frequencies of the nouns in determiner-adjective-noun phrases. We conclude that individual word frequencies and phrase frequencies both affect the time needed to produce noun phrases and discuss how these findings may be captured in models of the mental lexicon and of phrase production
  • Shao, Z., Roelofs, A., Martin, R., & Meyer, A. S. (2015). Selective inhibition and naming performance in semantic blocking, picture-word interference, and color-word stroop tasks. Journal of Experimental Psychology: Learning, Memory, and Cognition, 41, 1806-1820. doi:10.1037/a0039363.

    Abstract

    In two studies, we examined whether explicit distractors are necessary and sufficient toevoke selective inhibition in three naming tasks: the semantic blocking, picture-word interference, and color-word Stroop task. Delta plots were used to quantify the size of the interference effects as a function of reaction time (RT). Selective inhibition was operationalized as the decrease in the size of the interference effect as a function of naming RT. For all naming tasks, mean naming RTs were significantly longer in the interference condition than in a control condition. The slopes of the interference effects for the longest naming RTs correlated with the magnitude of the mean interference effect in both the semantic blocking task and the picture-word interference task, suggesting that selective inhibition was involved to reduce the interference from strong semantic competitors either invoked by a single explicit competitor or strong implicit competitors in picture naming. However, there was no correlation between the slopes and the mean interference effect in the Stroop task, suggesting less importance of selective inhibition in this task despite explicit distractors. Whereas the results of the semantic blocking task suggest that an explicit distractor is not necessary for triggering inhibition, the results of the Stroop task suggest that such a distractor is not sufficient for evoking inhibition either.
  • Sharoh, D., Van Mourik, T., Bains, L. J., Segaert, K., Weber, K., Hagoort, P., & Norris, D. (2019). Laminar specific fMRI reveals directed interactions in distributed networks during language processing. Proceedings of the National Academy of Sciences of the United States of America, 116(42), 21185-21190. doi:10.1073/pnas.1907858116.

    Abstract

    Interactions between top-down and bottom-up information streams are integral to brain function but challenging to measure noninvasively. Laminar resolution, functional MRI (lfMRI) is sensitive to depth-dependent properties of the blood oxygen level-dependent (BOLD) response, which can be potentially related to top-down and bottom-up signal contributions. In this work, we used lfMRI to dissociate the top-down and bottom-up signal contributions to the left occipitotemporal sulcus (LOTS) during word reading. We further demonstrate that laminar resolution measurements could be used to identify condition-specific distributed networks on the basis of whole-brain connectivity patterns specific to the depth-dependent BOLD signal. The networks corresponded to top-down and bottom-up signal pathways targeting the LOTS during word reading. We show that reading increased the top-down BOLD signal observed in the deep layers of the LOTS and that this signal uniquely related to the BOLD response in other language-critical regions. These results demonstrate that lfMRI can reveal important patterns of activation that are obscured at standard resolution. In addition to differences in activation strength as a function of depth, we also show meaningful differences in the interaction between signals originating from different depths both within a region and with the rest of the brain. We thus show that lfMRI allows the noninvasive measurement of directed interaction between brain regions and is capable of resolving different connectivity patterns at submillimeter resolution, something previously considered to be exclusively in the domain of invasive recordings.
  • Shen, C., & Janse, E. (2019). Articulatory control in speech production. In S. Calhoun, P. Escudero, M. Tabain, & P. Warren (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences (ICPhS 2019) (pp. 2533-2537). Canberra, Australia: Australasian Speech Science and Technology Association Inc.
  • Shen, C., Cooke, M., & Janse, E. (2019). Individual articulatory control in speech enrichment. In M. Ochmann, M. Vorländer, & J. Fels (Eds.), Proceedings of the 23rd International Congress on Acoustics (pp. 5726-5730). Berlin: Deutsche Gesellschaft für Akustik.

    Abstract

    ndividual talkers may use various strategies to enrich their speech while speaking in noise (i.e., Lombard speech) to improve their intelligibility. The resulting acoustic-phonetic changes in Lombard speech vary amongst different speakers, but it is unclear what causes these talker differences, and what impact these differences have on intelligibility. This study investigates the potential role of articulatory control in talkers’ Lombard speech enrichment success. Seventy-eight speakers read out sentences in both their habitual style and in a condition where they were instructed to speak clearly while hearing loud speech-shaped noise. A diadochokinetic (DDK) speech task that requires speakers to repetitively produce word or non-word sequences as accurately and as rapidly as possible, was used to quantify their articulatory control. Individuals’ predicted intelligibility in both speaking styles (presented at -5 dB SNR) was measured using an acoustic glimpse-based metric: the High-Energy Glimpse Proportion (HEGP). Speakers’ HEGP scores show a clear effect of speaking condition (better HEGP scores in the Lombard than habitual condition), but no simple effect of articulatory control on HEGP, nor an interaction between speaking condition and articulatory control. This indicates that individuals’ speech enrichment success as measured by the HEGP metric was not predicted by DDK performance.
  • Sicoli, M. A., Stivers, T., Enfield, N. J., & Levinson, S. C. (2015). Marked initial pitch in questions signals marked communicative function. Language and Speech, 58(2), 204-223. doi:10.1177/0023830914529247.

    Abstract

    In conversation, the initial pitch of an utterance can provide an early phonetic cue of the communicative function, the speech act, or the social action being implemented. We conducted quantitative acoustic measurements and statistical analyses of pitch in over 10,000 utterances, including 2512 questions, their responses, and about 5000 other utterances by 180 total speakers from a corpus of 70 natural conversations in 10 languages. We measured pitch at first prominence in a speaker’s utterance and discriminated utterances by language, speaker, gender, question form, and what social action is achieved by the speaker’s turn. Through applying multivariate logistic regression we found that initial pitch that significantly deviated from the speaker’s median pitch level was predictive of the social action of the question. In questions designed to solicit agreement with an evaluation rather than information, pitch was divergent from a speaker’s median predictably in the top 10% of a speakers range. This latter finding reveals a kind of iconicity in the relationship between prosody and social action in which a marked pitch correlates with a marked social action. Thus, we argue that speakers rely on pitch to provide an early signal for recipients that the question is not to be interpreted through its literal semantics but rather through an inference.
  • Simanova, I., Van Gerven, M. A., Oostenveld, R., & Hagoort, P. (2015). Predicting the semantic category of internally generated words from neuromagnetic recordings. Journal of Cognitive Neuroscience, 27(1), 35-45. doi:10.1162/jocn_a_00690.

    Abstract

    In this study, we explore the possibility to predict the semantic category of words from brain signals in a free word generation task. Participants produced single words from different semantic categories in a modified semantic fluency task. A Bayesian logistic regression classifier was trained to predict the semantic category of words from single-trial MEG data. Significant classification accuracies were achieved using sensor-level MEG time series at the time interval of conceptual preparation. Semantic category prediction was also possible using source-reconstructed time series, based on minimum norm estimates of cortical activity. Brain regions that contributed most to classification on the source level were identified. These were the left inferior frontal gyrus, left middle frontal gyrus, and left posterior middle temporal gyrus. Additionally, the temporal dynamics of brain activity underlying the semantic preparation during word generation was explored. These results provide important insights about central aspects of language production
  • Simpson, N. H., Ceroni, F., Reader, R. H., Covill, L. E., Knight, J. C., the SLI Consortium, Hennessy, E. R., Bolton, P. F., Conti-Ramsden, G., O’Hare, A., Baird, G., Fisher, S. E., & Newbury, D. F. (2015). Genome-wide analysis identifies a role for common copy number variants in specific language impairment. European Journal of Human Genetics, 23, 1370-1377. doi:10.1038/ejhg.2014.296.

    Abstract

    An exploratory genome-wide copy number variant (CNV) study was performed in 127 independent cases with specific language impairment (SLI), their first-degree relatives (385 individuals) and 269 population controls. Language-impaired cases showed an increased CNV burden in terms of the average number of events (11.28 vs 10.01, empirical P=0.003), the total length of CNVs (717 vs 513 Kb, empirical P=0.0001), the average CNV size (63.75 vs 51.6 Kb, empirical P=0.0005) and the number of genes spanned (14.29 vs 10.34, empirical P=0.0007) when compared with population controls, suggesting that CNVs may contribute to SLI risk. A similar trend was observed in first-degree relatives regardless of affection status. The increased burden found in our study was not driven by large or de novo events, which have been described as causative in other neurodevelopmental disorders. Nevertheless, de novo CNVs might be important on a case-by-case basis, as indicated by identification of events affecting relevant genes, such as ACTR2 and CSNK1A1, and small events within known micro-deletion/-duplication syndrome regions, such as chr8p23.1. Pathway analysis of the genes present within the CNVs of the independent cases identified significant overrepresentation of acetylcholine binding, cyclic-nucleotide phosphodiesterase activity and MHC proteins as compared with controls. Taken together, our data suggest that the majority of the risk conferred by CNVs in SLI is via common, inherited events within a ‘common disorder–common variant’ model. Therefore the risk conferred by CNVs will depend upon the combination of events inherited (both CNVs and SNPs), the genetic background of the individual and the environmental factors.

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  • Sjerps, M. J., & Reinisch, E. (2015). Divide and conquer: How perceptual contrast sensitivity and perceptual learning cooperate in reducing input variation in speech perception. Journal of Experimental Psychology: Human Perception and Performance, 41(3), 710-722. doi:10.1037/a0039028.

    Abstract

    Listeners have to overcome variability of the speech signal that can arise, for example, because of differences in room acoustics, differences in speakers’ vocal tract properties, or idiosyncrasies in pronunciation. Two mechanisms that are involved in resolving such variation are perceptually contrastive effects that arise from surrounding acoustic context and lexically guided perceptual learning. Although both processes have been studied in great detail, little attention has been paid to how they operate relative to each other in speech perception. The present study set out to address this issue. The carrier parts of exposure stimuli of a classical perceptual learning experiment were spectrally filtered such that the acoustically ambiguous final fricatives sounded relatively more like the lexically intended sound (Experiment 1) or the alternative (Experiment 2). Perceptual learning was found only in the latter case. The findings show that perceptual contrast effects precede lexically guided perceptual learning, at least in terms of temporal order, and potentially in terms of cognitive processing levels as well
  • Sjerps, M. J., & Chang, E. F. (2019). The cortical processing of speech sounds in the temporal lobe. In P. Hagoort (Ed.), Human language: From genes and brain to behavior (pp. 361-379). Cambridge, MA: MIT Press.
  • Sjerps, M. J., Fox, N. P., Johnson, K., & Chang, E. F. (2019). Speaker-normalized sound representations in the human auditory cortex. Nature Communications, 10: 2465. doi:10.1038/s41467-019-10365-z.

    Abstract

    The acoustic dimensions that distinguish speech sounds (like the vowel differences in “boot” and “boat”) also differentiate speakers’ voices. Therefore, listeners must normalize across speakers without losing linguistic information. Past behavioral work suggests an important role for auditory contrast enhancement in normalization: preceding context affects listeners’ perception of subsequent speech sounds. Here, using intracranial electrocorticography in humans, we investigate whether and how such context effects arise in auditory cortex. Participants identified speech sounds that were preceded by phrases from two different speakers whose voices differed along the same acoustic dimension as target words (the lowest resonance of the vocal tract). In every participant, target vowels evoke a speaker-dependent neural response that is consistent with the listener’s perception, and which follows from a contrast enhancement model. Auditory cortex processing thus displays a critical feature of normalization, allowing listeners to extract meaningful content from the voices of diverse speakers.

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  • Sjerps, M. J., & Meyer, A. S. (2015). Variation in dual-task performance reveals late initiation of speech planning in turn-taking. Cognition, 136, 304-324. doi:10.1016/j.cognition.2014.10.008.

    Abstract

    The smooth transitions between turns in natural conversation suggest that speakers often begin to plan their utterances while listening to their interlocutor. The presented study investigates whether this is indeed the case and, if so, when utterance planning begins. Two hypotheses were contrasted: that speakers begin to plan their turn as soon as possible (in our experiments less than a second after the onset of the interlocutor’s turn), or that they do so close to the end of the interlocutor’s turn. Turn-taking was combined with a finger tapping task to measure variations in cognitive load. We assumed that the onset of speech planning in addition to listening would be accompanied by deterioration in tapping performance. Two picture description experiments were conducted. In both experiments there were three conditions: (1) Tapping and Speaking, where participants tapped a complex pattern while taking over turns from a pre-recorded speaker, (2) Tapping and Listening, where participants carried out the tapping task while overhearing two pre-recorded speakers, and (3) Speaking Only, where participants took over turns as in the Tapping and Speaking condition but without tapping. The experiments differed in the amount of tapping training the participants received at the beginning of the session. In Experiment 2, the participants’ eye-movements were recorded in addition to their speech and tapping. Analyses of the participants’ tapping performance and eye movements showed that they initiated the cognitively demanding aspects of speech planning only shortly before the end of the turn of the preceding speaker. We argue that this is a smart planning strategy, which may be the speakers’ default in many everyday situations.
  • Sleegers, K., Bettens, K., De Roeck, A., Van Cauwenberghe, C., Cuyvers, E., Verheijen, J., Struyfs, H., Van Dongen, J., Vermeulen, S., Engelborghs, S., Vandenbulcke, M., Vandenberghe, R., De Deyn, P., Van Broeckhoven, C., & BELNEU consortium (2015). A 22-single nucleotide polymorphism Alzheimer's disease risk score correlates with family history, onset age, and cerebrospinal fluid Aβ42. Alzheimer's & Dementia, 11(12), 1452-1460. doi:10.1016/j.jalz.2015.02.013.

    Abstract

    Introduction The ability to identify individuals at increased genetic risk for Alzheimer's disease (AD) may streamline biomarker and drug trials and aid clinical and personal decision making. Methods We evaluated the discriminative ability of a genetic risk score (GRS) covering 22 published genetic risk loci for AD in 1162 Flanders-Belgian AD patients and 1019 controls and assessed correlations with family history, onset age, and cerebrospinal fluid (CSF) biomarkers (Aβ1-42, T-Tau, P-Tau181P). Results A GRS including all single nucleotide polymorphisms (SNPs) and age-specific APOE ε4 weights reached area under the curve (AUC) 0.70, which increased to AUC 0.78 for patients with familial predisposition. Risk of AD increased with GRS (odds ratio, 2.32 (95% confidence interval 2.08-2.58 per unit; P < 1.0e-15). Onset age and CSF Aβ1-42 decreased with increasing GRS (Ponset-age = 9.0e-11; PAβ = 8.9e-7). Discussion The discriminative ability of this 22-SNP GRS is still limited, but these data illustrate that incorporation of age-specific weights improves discriminative ability. GRS-phenotype correlations highlight the feasibility of identifying individuals at highest susceptibility. © 2015 The Authors.
  • Slonimska, A., Ozyurek, A., & Campisi, E. (2015). Ostensive signals: markers of communicative relevance of gesture during demonstration to adults and children. In G. Ferré, & M. Tutton (Eds.), Proceedings of the 4th GESPIN - Gesture & Speech in Interaction Conference (pp. 217-222). Nantes: Universite of Nantes.

    Abstract

    Speakers adapt their speech and gestures in various ways for their audience. We investigated further whether they use
    ostensive signals (eye gaze, ostensive speech (e.g. like this, this) or a combination of both) in relation to their gestures
    when talking to different addressees, i.e., to another adult or a child in a multimodal demonstration task. While adults used
    more eye gaze towards their gestures with other adults than with children, they were more likely to use combined
    ostensive signals for children than for adults. Thus speakers mark the communicative relevance of their gestures with different types of ostensive signals and by taking different types of addressees into account.
  • Smalle, E., Szmalec, A., Bogaerts, L., Page, M. P. A., Narang, V., Misra, D., Araujo, S., Lohagun, N., Khan, O., Singh, A., Mishra, R. K., & Huettig, F. (2019). Literacy improves short-term serial recall of spoken verbal but not visuospatial items - Evidence from illiterate and literate adults. Cognition, 185, 144-150. doi:10.1016/j.cognition.2019.01.012.

    Abstract

    It is widely accepted that specific memory processes, such as serial-order memory, are involved in written language development and predictive of reading and spelling abilities. The reverse question, namely whether orthographic abilities also affect serial-order memory, has hardly been investigated. In the current study, we compared 20 illiterate people with a group of 20 literate matched controls on a verbal and a visuospatial version of the Hebb paradigm, measuring both short- and long-term serial-order memory abilities. We observed better short-term serial-recall performance for the literate compared with the illiterate people. This effect was stronger in the verbal than in the visuospatial modality, suggesting that the improved capacity of the literate group is a consequence of learning orthographic skills. The long-term consolidation of ordered information was comparable across groups, for both stimulus modalities. The implications of these findings for current views regarding the bi-directional interactions between memory and written language development are discussed.

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  • Smeets, C. J. L. M., Jezierska, J., Watanabe, H., Duarri, A., Fokkens, M. R., Meijer, M., Zhou, Q., Yakovleva, T., Boddeke, E., den Dunnen, W., van Deursen, J., Bakalkin, G., Kampinga, H. H., van de Sluis, B., & S. Verbeek, D. (2015). Elevated mutant dynorphin A causes Purkinje cell loss and motor dysfunction in spinocerebellar ataxia type 23. Brain, 138(9), 2537-2552. doi:10.1093/brain/awv195.

    Abstract

    Spinocerebellar ataxia type 23 is caused by mutations in PDYN, which encodes the opioid neuropeptide precursor protein, prodynorphin. Prodynorphin is processed into the opioid peptides, α-neoendorphin, and dynorphins A and B, that normally exhibit opioid-receptor mediated actions in pain signalling and addiction. Dynorphin A is likely a mutational hotspot for spinocerebellar ataxia type 23 mutations, and in vitro data suggested that dynorphin A mutations lead to persistently elevated mutant peptide levels that are cytotoxic and may thus play a crucial role in the pathogenesis of spinocerebellar ataxia type 23. To further test this and study spinocerebellar ataxia type 23 in more detail, we generated a mouse carrying the spinocerebellar ataxia type 23 mutation R212W in PDYN. Analysis of peptide levels using a radioimmunoassay shows that these PDYNR212W mice display markedly elevated levels of mutant dynorphin A, which are associated with climber fibre retraction and Purkinje cell loss, visualized with immunohistochemical stainings. The PDYNR212W mice reproduced many of the clinical features of spinocerebellar ataxia type 23, with gait deficits starting at 3 months of age revealed by footprint pattern analysis, and progressive loss of motor coordination and balance at the age of 12 months demonstrated by declining performances on the accelerating Rotarod. The pathologically elevated mutant dynorphin A levels in the cerebellum coincided with transcriptionally dysregulated ionotropic and metabotropic glutamate receptors and glutamate transporters, and altered neuronal excitability. In conclusion, the PDYNR212W mouse is the first animal model of spinocerebellar ataxia type 23 and our work indicates that the elevated mutant dynorphin A peptide levels are likely responsible for the initiation and progression of the disease, affecting glutamatergic signalling, neuronal excitability, and motor performance. Our novel mouse model defines a critical role for opioid neuropeptides in spinocerebellar ataxia, and suggests that restoring the elevated mutant neuropeptide levels can be explored as a therapeutic intervention.
  • Smith, A. C. (2015). Modelling multimodal language processing. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Smits, A., Seijdel, N., Scholte, H., Heywood, C., Kentridge, R., & de Haan, E. (2019). Action blindsight and antipointing in a hemianopic patient. Neuropsychologia, 128, 270-275. doi:10.1016/j.neuropsychologia.2018.03.029.

    Abstract

    Blindsight refers to the observation of residual visual abilities in the hemianopic field of patients without a functional V1. Given the within- and between-subject variability in the preserved abilities and the phenomenal experience of blindsight patients, the fine-grained description of the phenomenon is still debated. Here we tested a patient with established “perceptual” and “attentional” blindsight (c.f. Danckert and Rossetti, 2005). Using a pointing paradigm patient MS, who suffers from a complete left homonymous hemianopia, showed clear above chance manual localisation of ‘unseen’ targets. In addition, target presentations in his blind field led MS, on occasion, to spontaneous responses towards his sighted field. Structural and functional magnetic resonance imaging was conducted to evaluate the magnitude of V1 damage. Results revealed the presence of a calcarine sulcus in both hemispheres, yet his right V1 is reduced, structurally disconnected and shows no fMRI response to visual stimuli. Thus, visual stimulation of his blind field can lead to “action blindsight” and spontaneous antipointing, in absence of a functional right V1. With respect to the antipointing, we suggest that MS may have registered the stimulation and subsequently presumes it must have been in his intact half field.

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  • Smorenburg, L., Rodd, J., & Chen, A. (2015). The effect of explicit training on the prosodic production of L2 sarcasm by Dutch learners of English. In M. Wolters, J. Livingstone, B. Beattie, R. Smith, M. MacMahon, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015). Glasgow, UK: University of Glasgow.

    Abstract

    Previous research [9] suggests that Dutch learners of (British) English are not able to express sarcasm prosodically in their L2. The present study investigates whether explicit training on the prosodic markers of sarcasm in English can improve learners’ realisation of sarcasm. Sarcastic speech was elicited in short simulated telephone conversations between Dutch advanced learners of English and a native British English-speaking ‘friend’ in two sessions, fourteen days apart. Between the two sessions, participants were trained by means of (1) a presentation, (2) directed independent practice, and (3) evaluation of participants’ production and individual feedback in small groups. L1 British English-speaking raters subsequently evaluated the degree of sarcastic sounding in the participants’ responses on a five-point scale. It was found that significantly higher sarcasm ratings were given to L2 learners’ production obtained after the training than that obtained before the training; explicit training on prosody has a positive effect on learners’ production of sarcasm.
  • Snijders Blok, L., Kleefstra, T., Venselaar, H., Maas, S., Kroes, H. Y., Lachmeijer, A. M. A., Van Gassen, K. L. I., Firth, H. V., Tomkins, S., Bodek, S., The DDD Study, Õunap, K., Wojcik, M. H., Cunniff, C., Bergstrom, K., Powis, Z., Tang, S., Shinde, D. N., Au, C., Iglesias, A. D., Izumi, K. and 18 moreSnijders Blok, L., Kleefstra, T., Venselaar, H., Maas, S., Kroes, H. Y., Lachmeijer, A. M. A., Van Gassen, K. L. I., Firth, H. V., Tomkins, S., Bodek, S., The DDD Study, Õunap, K., Wojcik, M. H., Cunniff, C., Bergstrom, K., Powis, Z., Tang, S., Shinde, D. N., Au, C., Iglesias, A. D., Izumi, K., Leonard, J., Tayoun, A. A., Baker, S. W., Tartaglia, M., Niceta, M., Dentici, M. L., Okamoto, N., Miyake, N., Matsumoto, N., Vitobello, A., Faivre, L., Philippe, C., Gilissen, C., Wiel, L., Pfundt, R., Derizioti, P., Brunner, H. G., & Fisher, S. E. (2019). De novo variants disturbing the transactivation capacity of POU3F3 cause a characteristic neurodevelopmental disorder. The American Journal of Human Genetics, 105(2), 403-412. doi:10.1016/j.ajhg.2019.06.007.

    Abstract

    POU3F3, also referred to as Brain-1, is a well-known transcription factor involved in the development of the central nervous system, but it has not previously been associated with a neurodevelopmental disorder. Here, we report the identification of 19 individuals with heterozygous POU3F3 disruptions, most of which are de novo variants. All individuals had developmental delays and/or intellectual disability and impairments in speech and language skills. Thirteen individuals had characteristic low-set, prominent, and/or cupped ears. Brain abnormalities were observed in seven of eleven MRI reports. POU3F3 is an intronless gene, insensitive to nonsense-mediated decay, and 13 individuals carried protein-truncating variants. All truncating variants that we tested in cellular models led to aberrant subcellular localization of the encoded protein. Luciferase assays demonstrated negative effects of these alleles on transcriptional activation of a reporter with a FOXP2-derived binding motif. In addition to the loss-of-function variants, five individuals had missense variants that clustered at specific positions within the functional domains, and one small in-frame deletion was identified. Two missense variants showed reduced transactivation capacity in our assays, whereas one variant displayed gain-of-function effects, suggesting a distinct pathophysiological mechanism. In bioluminescence resonance energy transfer (BRET) interaction assays, all the truncated POU3F3 versions that we tested had significantly impaired dimerization capacities, whereas all missense variants showed unaffected dimerization with wild-type POU3F3. Taken together, our identification and functional cell-based analyses of pathogenic variants in POU3F3, coupled with a clinical characterization, implicate disruptions of this gene in a characteristic neurodevelopmental disorder.
  • Soares, S. M. P., Ong, G., Abutalebi, J., Del Maschio, N., Sewell, D., & Weekes, B. (2019). A diffusion model approach to analyzing performance on the flanker task: the role of the DLPFC. Bilingualism: Language and Cognition, 22(5), 1194-1208. doi:10.1017/S1366728918000974.

    Abstract

    The anterior cingulate cortex (ACC) and the dorsolateral prefrontal cortex (DLPFC) are involved in conflict detection and
    conflict resolution, respectively. Here, we investigate how lifelong bilingualism induces neuroplasticity to these structures by
    employing a novel analysis of behavioural performance. We correlated grey matter volume (GMV) in seniors reported by
    Abutalebi et al. (2015) with behavioral Flanker task performance fitted using the diffusion model (Ratcliff, 1978). As
    predicted, we observed significant correlations between GMV in the DLPFC and Flanker performance. However, for
    monolinguals the non-decision time parameter was significantly correlated with GMV in the left DLPFC, whereas for
    bilinguals the correlation was significant in the right DLPFC. We also found a significant correlation between age and GMV
    in left DLPFC and the non-decision time parameter for the conflict effect for monolinguals only.
    We submit that this is due to cumulative demands on cognitive control over a lifetime of bilingual language processing
  • Solberg Økland, H., Todorović, A., Lüttke, C. S., McQueen, J. M., & De Lange, F. P. (2019). Combined predictive effects of sentential and visual constraints in early audiovisual speech processing. Scientific Reports, 9: 7870. doi:10.1038/s41598-019-44311-2.

    Abstract

    In language comprehension, a variety of contextual cues act in unison to render upcoming words more or less predictable. As a sentence unfolds, we use prior context (sentential constraints) to predict what the next words might be. Additionally, in a conversation, we can predict upcoming sounds through observing the mouth movements of a speaker (visual constraints). In electrophysiological studies, effects of visual constraints have typically been observed early in language processing, while effects of sentential constraints have typically been observed later. We hypothesized that the visual and the sentential constraints might feed into the same predictive process such that effects of sentential constraints might also be detectable early in language processing through modulations of the early effects of visual salience. We presented participants with audiovisual speech while recording their brain activity with magnetoencephalography. Participants saw videos of a person saying sentences where the last word was either sententially constrained or not, and began with a salient or non-salient mouth movement. We found that sentential constraints indeed exerted an early (N1) influence on language processing. Sentential modulations of the N1 visual predictability effect were visible in brain areas associated with semantic processing, and were differently expressed in the two hemispheres. In the left hemisphere, visual and sentential constraints jointly suppressed the auditory evoked field, while the right hemisphere was sensitive to visual constraints only in the absence of strong sentential constraints. These results suggest that sentential and visual constraints can jointly influence even very early stages of audiovisual speech comprehension.
  • Sollis, E. (2019). A network of interacting proteins disrupted in language-related disorders. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • Sonnweber, R., Ravignani, A., & Fitch, W. T. (2015). Non-adjacent visual dependency learning in chimpanzees. Animal Cognition, 18(3), 733-745. doi:10.1007/s10071-015-0840-x.

    Abstract

    Humans have a strong proclivity for structuring and patterning stimuli: Whether in space or time, we tend to mentally order stimuli in our environment and organize them into units with specific types of relationships. A crucial prerequisite for such organization is the cognitive ability to discern and process regularities among multiple stimuli. To investigate the evolutionary roots of this cognitive capacity, we tested chimpanzees—which, along with bonobos, are our closest living relatives—for simple, variable distance dependency processing in visual patterns. We trained chimpanzees to identify pairs of shapes either linked by an arbitrary learned association (arbitrary associative dependency) or a shared feature (same shape, feature-based dependency), and to recognize strings where items related to either of these ways occupied the first (leftmost) and the last (rightmost) item of the stimulus. We then probed the degree to which subjects generalized this pattern to new colors, shapes, and numbers of interspersed items. We found that chimpanzees can learn and generalize both types of dependency rules, indicating that the ability to encode both feature-based and arbitrary associative regularities over variable distances in the visual domain is not a human prerogative. Our results strongly suggest that these core components of human structural processing were already present in our last common ancestor with chimpanzees.

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  • Sonnweber, R. S., Ravignani, A., Stobbe, N., Schiestl, G., Wallner, B., & Fitch, W. T. (2015). Rank‐dependent grooming patterns and cortisol alleviation in Barbary macaques. American Journal of Primatology, 77(6), 688-700. doi:10.1002/ajp.22391.

    Abstract

    Flexibly adapting social behavior to social and environmental challenges helps to alleviate glucocorticoid (GC) levels, which may have positive fitness implications for an individual. For primates, the predominant social behavior is grooming. Giving grooming to others is particularly efficient in terms of GC mitigation. However, grooming is confined by certain limitations such as time constraints or restricted access to other group members. For instance, dominance hierarchies may impact grooming partner availability in primate societies. Consequently specific grooming patterns emerge. In despotic species focusing grooming activity on preferred social partners significantly ameliorates GC levels in females of all ranks. In this study we investigated grooming patterns and GC management in Barbary macaques, a comparably relaxed species. We monitored changes in grooming behavior and cortisol (C) for females of different ranks. Our results show that the C‐amelioration associated with different grooming patterns had a gradual connection with dominance hierarchy: while higher‐ranking individuals showed lowest urinary C measures when they focused their grooming on selected partners within their social network, lower‐ranking individuals expressed lowest C levels when dispersing their grooming activity evenly across their social partners. We argue that the relatively relaxed social style of Barbary macaque societies allows individuals to flexibly adapt grooming patterns, which is associated with rank‐specific GC management. Am. J. Primatol. 77:688–700, 2015
  • De Sousa, H., Langella, F., & Enfield, N. J. (2015). Temperature terms in Lao, Southern Zhuang, Southern Pinghua and Cantonese. In M. Koptjevskaja-Tamm (Ed.), The linguistics of temperature (pp. 594-638). Amsterdam: Benjamins.
  • Spaeth, J. M., Hunter, C. S., Bonatakis, L., Guo, M., French, C. A., Slack, I., Hara, M., Fisher, S. E., Ferrer, J., Morrisey, E. E., Stanger, B. Z., & Stein, R. (2015). The FOXP1, FOXP2 and FOXP4 transcription factors are required for islet alpha cell proliferation and function in mice. Diabetologia, 58, 1836-1844. doi:10.1007/s00125-015-3635-3.

    Abstract

    Aims/hypothesis Several forkhead box (FOX) transcription factor family members have important roles in controlling pancreatic cell fates and maintaining beta cell mass and function, including FOXA1, FOXA2 and FOXM1. In this study we have examined the importance of FOXP1, FOXP2 and FOXP4 of the FOXP subfamily in islet cell development and function. Methods Mice harbouring floxed alleles for Foxp1, Foxp2 and Foxp4 were crossed with pan-endocrine Pax6-Cre transgenic mice to generate single and compound Foxp mutant mice. Mice were monitored for changes in glucose tolerance by IPGTT, serum insulin and glucagon levels by radioimmunoassay, and endocrine cell development and proliferation by immunohistochemistry. Gene expression and glucose-stimulated hormone secretion experiments were performed with isolated islets. Results Only the triple-compound Foxp1/2/4 conditional knockout (cKO) mutant had an overt islet phenotype, manifested physiologically by hypoglycaemia and hypoglucagonaemia. This resulted from the reduction in glucagon-secreting alpha cell mass and function. The proliferation of alpha cells was profoundly reduced in Foxp1/2/4 cKO islets through the effects on mediators of replication (i.e. decreased Ccna2, Ccnb1 and Ccnd2 activators, and increased Cdkn1a inhibitor). Adult islet Foxp1/2/4 cKO beta cells secrete insulin normally while the remaining alpha cells have impaired glucagon secretion. Conclusions/interpretation Collectively, these findings reveal an important role for the FOXP1, 2, and 4 proteins in governing postnatal alpha cell expansion and function.
  • Spapé, M., Verdonschot, R. G., & Van Steenbergen, H. (2019). The E-Primer: An introduction to creating psychological experiments in E-Prime® (2nd ed. updated for E-Prime 3). Leiden: Leiden University Press.

    Abstract

    E-Prime® is the leading software suite by Psychology Software Tools for designing and running Psychology lab experiments. The E-Primer is the perfect accompanying guide: It provides all the necessary knowledge to make E-Prime accessible to everyone. You can learn the tools of Psychological science by following the E-Primer through a series of entertaining, step-by-step recipes that recreate classic experiments. The updated E-Primer expands its proven combination of simple explanations, interesting tutorials and fun exercises, and makes even the novice student quickly confident to create their dream experiment.
  • Speed, L., & Majid, A. (2019). Linguistic features of fragrances: The role of grammatical gender and gender associations. Attention, Perception & Psychophysics, 81(6), 2063-2077. doi:10.3758/s13414-019-01729-0.

    Abstract

    Odors are often difficult to identify and name, which leaves them vulnerable to the influence of language. The present study tests the boundaries of the effect of language on odor cognition by examining the effect of grammatical gender. We presented participants with male and female fragrances paired with descriptions of masculine or feminine grammatical gender. In Experiment 1 we found that memory for fragrances was enhanced when the grammatical gender of a fragrance description matched the gender of the fragrance. In Experiment 2 we found memory for fragrances was affected by both grammatical gender and gender associations in fragrance descriptions – recognition memory for odors was higher when the gender was incongruent. In sum, we demonstrated that even subtle aspects of language can affect odor cognition.

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  • Speed, L. J., O'Meara, C., San Roque, L., & Majid, A. (Eds.). (2019). Perception Metaphors. Amsterdam: Benjamins.

    Abstract

    Metaphor allows us to think and talk about one thing in terms of another, ratcheting up our cognitive and expressive capacity. It gives us concrete terms for abstract phenomena, for example, ideas become things we can grasp or let go of. Perceptual experience—characterised as physical and relatively concrete—should be an ideal source domain in metaphor, and a less likely target. But is this the case across diverse languages? And are some sensory modalities perhaps more concrete than others? This volume presents critical new data on perception metaphors from over 40 languages, including many which are under-studied. Aside from the wealth of data from diverse languages—modern and historical; spoken and signed—a variety of methods (e.g., natural language corpora, experimental) and theoretical approaches are brought together. This collection highlights how perception metaphor can offer both a bedrock of common experience and a source of continuing innovation in human communication
  • Stergiakouli, E., Martin, J., Hamshere, M. L., Langley, K., Evans, D. M., St Pourcain, B., Timpson, N. J., Owen, M. J., O'Donovan, M., Thapar, A., & Davey Smith, G. (2015). Shared Genetic Influences Between Attention-Deficit/Hyperactivity Disorder (ADHD) Traits in Children and Clinical ADHD. Journal of the American Academy of Child and Adolescent Psychiatry, 54(4), 322-327. doi:10.1016/j.jaac.2015.01.010.
  • Stoehr, A., Benders, T., Van Hell, J. G., & Fikkert, P. (2019). Bilingual preschoolers’ speech is associated with non-native maternal language input. Language Learning and Development, 15(1), 75-100. doi:10.1080/15475441.2018.1533473.

    Abstract

    Bilingual children are often exposed to non-native speech through their parents. Yet, little is known about the relation between bilingual preschoolers’ speech production and their speech input. The present study investigated the production of voice onset time (VOT) by Dutch-German bilingual preschoolers and their sequential bilingual mothers. The findings reveal an association between maternal VOT and bilingual children’s VOT in the heritage language German as well as in the majority language Dutch. By contrast, no input-production association was observed in the VOT production of monolingual German-speaking children and monolingual Dutch-speaking children. The results of this study provide the first empirical evidence that non-native and attrited maternal speech contributes to the often-observed linguistic differences between bilingual children and their monolingual peers.
  • Sumer, B. (2015). Acquisition of spatial language by signing and speaking children: A comparison of Turkish Sign Language (TID) and Turkish. PhD Thesis, Radboud University Nijmegen, Nijmegen.
  • De Swart, P., & Van Bergen, G. (2019). How animacy and verbal information influence V2 sentence processing: Evidence from eye movements. Open Linguistics, 5(1), 630-649. doi:10.1515/opli-2019-0035.

    Abstract

    There exists a clear association between animacy and the grammatical function of transitive subject. The grammar of some languages require the transitive subject to be high in animacy, or at least higher than the object. A similar animacy preference has been observed in processing studies in languages without such a categorical animacy effect. This animacy preference has been mainly established in structures in which either one or both arguments are provided before the verb. Our goal was to establish (i) whether this preference can already be observed before any argument is provided, and (ii) whether this preference is mediated by verbal information. To this end we exploited the V2 property of Dutch which allows the verb to precede its arguments. Using a visual-world eye-tracking paradigm we presented participants with V2 structures with either an auxiliary (e.g. Gisteren heeft X … ‘Yesterday, X has …’) or a lexical main verb (e.g. Gisteren motiveerde X … ‘Yesterday, X motivated …’) and we measured looks to the animate referent. The results indicate that the animacy preference can already be observed before arguments are presented and that the selectional restrictions of the verb mediate this bias, but do not override it completely.
  • Sweegers, C. C. G., Takashima, A., Fernández, G., & Talamini, L. M. (2015). Neural mechanisms supporting the extraction of general knowledge across episodic memories. NeuroImage, 87, 138-146. doi:10.1016/j.neuroimage.2013.10.063.

    Abstract

    General knowledge acquisition entails the extraction of statistical regularities from the environment. At high levels of complexity, this may involve the extraction, and consolidation, of associative regularities across event memories. The underlying neural mechanisms would likely involve a hippocampo-neocortical dialog, as proposed previously for system-level consolidation. To test these hypotheses, we assessed possible differences in consolidation between associative memories containing cross-episodic regularities and unique associative memories. Subjects learned face–location associations, half of which responded to complex regularities regarding the combination of facial features and locations, whereas the other half did not. Importantly, regularities could only be extracted over hippocampus-encoded, associative aspects of the items. Memory was assessed both immediately after encoding and 48 h later, under fMRI acquisition. Our results suggest that processes related to system-level reorganization occur preferentially for regular associations across episodes. Moreover, the build-up of general knowledge regarding regular associations appears to involve the coordinated activity of the hippocampus and mediofrontal regions. The putative cross-talk between these two regions might support a mechanism for regularity extraction. These findings suggest that the consolidation of cross-episodic regularities may be a key mechanism underlying general knowledge acquisition.
  • Takashima, A., Bakker-Marshall, I., Van Hell, J. G., McQueen, J. M., & Janzen, G. (2019). Neural correlates of word learning in children. Developmental Cognitive Neuroscience, 37: 100647. doi:10.1016/j.dcn.2019.100649.

    Abstract

    Memory representations of words are thought to undergo changes with consolidation: Episodic memories of novel words are transformed into lexical representations that interact with other words in the mental dictionary. Behavioral studies have shown that this lexical integration process is enhanced when there is more time for consolidation. Neuroimaging studies have further revealed that novel word representations are initially represented in a hippocampally-centered system, whereas left posterior middle temporal cortex activation increases with lexicalization. In this study, we measured behavioral and brain responses to newly-learned words in children. Two groups of Dutch children, aged between 8-10 and 14-16 years, were trained on 30 novel Japanese words depicting novel concepts. Children were tested on word-forms, word-meanings, and the novel words’ influence on existing word processing immediately after training, and again after a week. In line with the adult findings, hippocampal involvement decreased with time. Lexical integration, however, was not observed immediately or after a week, neither behaviorally nor neurally. It appears that time alone is not always sufficient for lexical integration to occur. We suggest that other factors (e.g., the novelty of the concepts and familiarity with the language the words are derived from) might also influence the integration process.

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  • Takashima, A., & Verhoeven, L. (2019). Radical repetition effects in beginning learners of Chinese as a foreign language reading. Journal of Neurolinguistics, 50, 71-81. doi:10.1016/j.jneuroling.2018.03.001.

    Abstract

    The aim of the present study was to examine whether repetition of radicals during training of Chinese characters leads to better word acquisition performance in beginning learners of Chinese as a foreign language. Thirty Dutch university students were trained on 36 Chinese one-character words for their pronunciations and meanings. They were also exposed to the specifics of the radicals, that is, for phonetic radicals, the associated pronunciation was explained, and for semantic radicals the associated categorical meanings were explained. Results showed that repeated exposure to phonetic and semantic radicals through character pronunciation and meaning trainings indeed induced better understanding of those radicals that were shared among different characters. Furthermore, characters in the training set that shared phonetic radicals were pronounced better than those that did not. Repetition of semantic radicals across different characters, however, hindered the learning of exact meanings. Students generally confused the meanings of other characters that shared the semantic radical. The study shows that in the initial stage of learning, overlapping information of the shared radicals are effectively learned. Acquisition of the specifics of individual characters, however, requires more training.

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  • Tarenskeen, S., Broersma, M., & Geurts, B. (2015). Overspecification of color, pattern, and size: Salience, absoluteness, and consistency. Frontiers in Psychology, 6: 1703. doi:10.3389/fpsyg.2015.01703.

    Abstract

    The rates of overspecification of color, pattern, and size are compared, to investigate how salience and absoluteness contribute to the production of overspecification. Color and pattern are absolute and salient attributes, whereas size is relative and less salient. Additionally, a tendency toward consistent responses is assessed. Using a within-participants design, we find similar rates of color and pattern overspecification, which are both higher than the rate of size overspecification. Using a between-participants design, however, we find similar rates of pattern and size overspecification, which are both lower than the rate of color overspecification. This indicates that although many speakers are more likely to include color than pattern (probably because color is more salient), they may also treat pattern like color due to a tendency toward consistency. We find no increase in size overspecification when the salience of size is increased, suggesting that speakers are more likely to include absolute than relative attributes. However, we do find an increase in size overspecification when mentioning the attributes is triggered, which again shows that speakers tend to refer in a consistent manner, and that there are circumstances in which even size overspecification is frequently produced.
  • Tekcan, A. I., Yilmaz, E., Kaya Kızılö, B., Karadöller, D. Z., Mutafoğlu, M., & Erciyes, A. (2015). Retrieval and phenomenology of autobiographical memories in blind individuals. Memory, 23(3), 329-339. doi:10.1080/09658211.2014.886702.

    Abstract

    Although visual imagery is argued to be an essential component of autobiographical memory, there have been surprisingly few studies on autobiographical memory processes in blind individuals, who have had no or limited visual input. The purpose of the present study was to investigate how blindness affects retrieval and phenomenology of autobiographical memories. We asked 48 congenital/early blind and 48 sighted participants to recall autobiographical memories in response to six cue words, and to fill out the Autobiographical Memory Questionnaire measuring a number of variables including imagery, belief and recollective experience associated with each memory. Blind participants retrieved fewer memories and reported higher auditory imagery at retrieval than sighted participants. Moreover, within the blind group, participants with total blindness reported higher auditory imagery than those with some light perception. Blind participants also assigned higher importance, belief and recollection ratings to their memories than sighted participants. Importantly, these group differences remained the same for recent as well as childhood memories.
  • Ten Bosch, L., Mulder, K., & Boves, L. (2019). Phase synchronization between EEG signals as a function of differences between stimuli characteristics. In Proceedings of Interspeech 2019 (pp. 1213-1217). doi:10.21437/Interspeech.2019-2443.

    Abstract

    The neural processing of speech leads to specific patterns in the brain which can be measured as, e.g., EEG signals. When properly aligned with the speech input and averaged over many tokens, the Event Related Potential (ERP) signal is able to differentiate specific contrasts between speech signals. Well-known effects relate to the difference between expected and unexpected words, in particular in the N400, while effects in N100 and P200 are related to attention and acoustic onset effects. Most EEG studies deal with the amplitude of EEG signals over time, sidestepping the effect of phase and phase synchronization. This paper investigates the relation between phase in the EEG signals measured in an auditory lexical decision task by Dutch participants listening to full and reduced English word forms. We show that phase synchronization takes place across stimulus conditions, and that the so-called circular variance is narrowly related to the type of contrast between stimuli.
  • Ten Bosch, L., Boves, L., & Ernestus, M. (2015). DIANA, an end-to-end computational model of human word comprehension. In Scottish consortium for ICPhS, M. Wolters, J. Livingstone, B. Beattie, R. Smith, M. MacMahon, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015). Glasgow: University of Glasgow.

    Abstract

    This paper presents DIANA, a new computational model of human speech processing. It is the first model that simulates the complete processing chain from the on-line processing of an acoustic signal to the execution of a response, including reaction times. Moreover it assumes minimal modularity. DIANA consists of three components. The activation component computes a probabilistic match between the input acoustic signal and representations in DIANA’s lexicon, resulting in a list of word hypotheses changing over time as the input unfolds. The decision component operates on this list and selects a word as soon as sufficient evidence is available. Finally, the execution component accounts for the time to execute a behavioral action. We show that DIANA well simulates the average participant in a word recognition experiment.
  • Ten Bosch, L., Boves, L., Tucker, B., & Ernestus, M. (2015). DIANA: Towards computational modeling reaction times in lexical decision in North American English. In Proceedings of Interspeech 2015: The 16th Annual Conference of the International Speech Communication Association (pp. 1576-1580).

    Abstract

    DIANA is an end-to-end computational model of speech processing, which takes as input the speech signal, and provides as output the orthographic transcription of the stimulus, a word/non-word judgment and the associated estimated reaction time. So far, the model has only been tested for Dutch. In this paper, we extend DIANA such that it can also process North American English. The model is tested by having it simulate human participants in a large scale North American English lexical decision experiment. The simulations show that DIANA can adequately approximate the reaction times of an average participant (r = 0.45). In addition, they indicate that DIANA does not yet adequately model the cognitive processes that take place after stimulus offset.
  • Ten Oever, S., Van Atteveldt, N., & Sack, A. T. (2015). Increased stimulus expectancy triggers low-frequency phase reset during restricted vigilance. Journal of Cognitive Neuroscience, 27(9), 1811-1822. doi:10.1162/jocn_a_00820.

    Abstract

    Temporal cues can be used to selectively attend to relevant information during abundant sensory stimulation. However, such cues differ vastly in the accuracy of their temporal estimates, ranging from very predictable to very unpredictable. When cues are strongly predictable, attention may facilitate selective processing by aligning relevant incoming information to high neuronal excitability phases of ongoing low-frequency oscillations. However, top-down effects on ongoing oscillations when temporal cues have some predictability, but also contain temporal uncertainties, are unknown. Here, we experimentally created such a situation of mixed predictability and uncertainty: A target could occur within a limited time window after cue but was always unpredictable in exact timing. Crucially to assess top-down effects in such a mixed situation, we manipulated target probability. High target likelihood, compared with low likelihood, enhanced delta oscillations more strongly as measured by evoked power and intertrial coherence. Moreover, delta phase modulated detection rates for probable targets. The delta frequency range corresponds with half-a-period to the target occurrence window and therefore suggests that low-frequency phase reset is engaged to produce a long window of high excitability when event timing is uncertain within a restricted temporal window.
  • Ten Oever, S., & Sack, A. T. (2019). Interactions between rhythmic and feature predictions to create parallel time-content associations. Frontiers in Neuroscience, 13: 791. doi:10.3389/fnins.2019.00791.

    Abstract

    The brain is inherently proactive, constantly predicting the when (moment) and what (content) of future input in order to optimize information processing. Previous research on such predictions has mainly studied the “when” or “what” domain separately, missing to investigate the potential integration of both types of predictive information. In the absence of such integration, temporal cues are assumed to enhance any upcoming content at the predicted moment in time (general temporal predictor). However, if the when and what prediction domain were integrated, a much more flexible neural mechanism may be proposed in which temporal-feature interactions would allow for the creation of multiple concurrent time-content predictions (parallel time-content predictor). Here, we used a temporal association paradigm in two experiments in which sound identity was systematically paired with a specific time delay after the offset of a rhythmic visual input stream. In Experiment 1, we revealed that participants associated the time delay of presentation with the identity of the sound. In Experiment 2, we unexpectedly found that the strength of this temporal association was negatively related to the EEG steady-state evoked responses (SSVEP) in preceding trials, showing that after high neuronal responses participants responded inconsistent with the time-content associations, similar to adaptation mechanisms. In this experiment, time-content associations were only present for low SSVEP responses in previous trials. These results tentatively show that it is possible to represent multiple time-content paired predictions in parallel, however, future research is needed to investigate this interaction further.
  • Ten Oever, S., & Sack, A. T. (2015). Oscillatory phase shapes syllable perception. Proceedings of the National Academy of Sciences of the United States of America, 112(52), 15833-15837. doi:10.1073/pnas.1517519112.

    Abstract

    The role of oscillatory phase for perceptual and cognitive processes is being increasingly acknowledged. To date, little is known about the direct role of phase in categorical perception. Here we show in two separate experiments that the identification of ambiguous syllables that can either be perceived as / da/ or / ga/ is biased by the underlying oscillatory phase as measured with EEG and sensory entrainment to rhythmic stimuli. The measured phase difference in which perception is biased toward / da/ or / ga/ exactly matched the different temporal onset delays in natural audiovisual speech between mouth movements and speech sounds, which last 80 ms longer for / ga/ than for / da/. These results indicate the functional relationship between prestimulus phase and syllable identification, and signify that the origin of this phase relationship could lie in exposure and subsequent learning of unique audiovisual temporal onset differences.
  • Ter Bekke, M., Ozyurek, A., & Ünal, E. (2019). Speaking but not gesturing predicts motion event memory within and across languages. In A. Goel, C. Seifert, & C. Freksa (Eds.), Proceedings of the 41st Annual Meeting of the Cognitive Science Society (CogSci 2019) (pp. 2940-2946). Montreal, QB: Cognitive Science Society.

    Abstract

    In everyday life, people see, describe and remember motion events. We tested whether the type of motion event information (path or manner) encoded in speech and gesture predicts which information is remembered and if this varies across speakers of typologically different languages. We focus on intransitive motion events (e.g., a woman running to a tree) that are described differently in speech and co-speech gesture across languages, based on how these languages typologically encode manner and path information (Kita & Özyürek, 2003; Talmy, 1985). Speakers of Dutch (n = 19) and Turkish (n = 22) watched and described motion events. With a surprise (i.e. unexpected) recognition memory task, memory for manner and path components of these events was measured. Neither Dutch nor Turkish speakers’ memory for manner went above chance levels. However, we found a positive relation between path speech and path change detection: participants who described the path during encoding were more accurate at detecting changes to the path of an event during the memory task. In addition, the relation between path speech and path memory changed with native language: for Dutch speakers encoding path in speech was related to improved path memory, but for Turkish speakers no such relation existed. For both languages, co-speech gesture did not predict memory speakers. We discuss the implications of these findings for our understanding of the relations between speech, gesture, type of encoding in language and memory.
  • Terband, H., Rodd, J., & Maas, E. (2015). Simulations of feedforward and feedback control in apraxia of speech (AOS): Effects of noise masking on vowel production in the DIVA model. In M. Wolters, J. Livingstone, B. Beattie, R. Smith, M. MacMahan, J. Stuart-Smith, & J. Scobbie (Eds.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015).

    Abstract

    Apraxia of Speech (AOS) is a motor speech disorder whose precise nature is still poorly understood. A recent behavioural experiment featuring a noise masking paradigm suggests that AOS reflects a disruption of feedforward control, whereas feedback control is spared and plays a more prominent role in achieving and maintaining segmental contrasts [10]. In the present study, we set out to validate the interpretation of AOS as a feedforward impairment by means of a series of computational simulations with the DIVA model [6, 7] mimicking the behavioural experiment. Simulation results showed a larger reduction in vowel spacing and a smaller vowel dispersion in the masking condition compared to the no-masking condition for the simulated feedforward deficit, whereas the other groups showed an opposite pattern. These results mimic the patterns observed in the human data, corroborating the notion that AOS can be conceptualized as a deficit in feedforward control
  • Thiebaut de Schotten, M., Friedrich, P., & Forkel, S. J. (2019). One size fits all does not apply to brain lateralisation. Physics of Life Reviews, 30, 30-33. doi:10.1016/j.plrev.2019.07.007.

    Abstract

    Our understanding of the functioning of the brain is primarily based on an average model of the brain's functional organisation, and any deviation from the standard is considered as random noise or a pathological appearance. Studying pathologies has, however, greatly contributed to our understanding of brain functions. For instance, the study of naturally-occurring or surgically-induced brain lesions revealed that language is predominantly lateralised to the left hemisphere while perception/action and emotion are commonly lateralised to the right hemisphere. The lateralisation of function was subsequently replicated by task-related functional neuroimaging in the healthy population. Despite its high significance and reproducibility, this pattern of lateralisation of function is true for most, but not all participants. Bilateral and flipped representations of classically lateralised functions have been reported during development and in the healthy adult population for language, perception/action and emotion. Understanding these different functional representations at an individual level is crucial to improve the sophistication of our models and account for the variance in developmental trajectories, cognitive performance differences and clinical recovery. With the availability of in vivo neuroimaging, it has become feasible to study large numbers of participants and reliably characterise individual differences, also referred to as phenotypes. Yet, we are at the beginning of inter-individual variability modelling, and new theories of brain function will have to account for these differences across participants.
  • Thielen, J.-W., Takashima, A., Rutters, F., Tendolkar, I., & Fernandez, G. (2015). Transient relay function of midline thalamic nuclei during long-term memory consolidation in humans. Learning & Memory, 22, 527-531. doi:10.1101/lm.038372.115.

    Abstract

    To test the hypothesis that thalamic midline nuclei play a transient role in memory consolidation, we reanalyzed a prospective functional MRI study, contrasting recent and progressively more remote memory retrieval. We revealed a transient thalamic connectivity increase with the hippocampus, the medial prefrontal cortex (mPFC), and a parahippocampal area, which decreased with time. In turn, mPFC-parahippocampal connectivity increased progressively. These findings support a model in which thalamic midline nuclei serve as a hub linking hippocampus, mPFC, and posterior representational areas during memory retrieval at an early (2 h) stage of consolidation, extending classical systems consolidation models by attributing a transient role to midline thalamic nuclei.
  • Thomaz, A. L., Lieven, E., Cakmak, M., Chai, J. Y., Garrod, S., Gray, W. D., Levinson, S. C., Paiva, A., & Russwinkel, N. (2019). Interaction for task instruction and learning. In K. A. Gluck, & J. E. Laird (Eds.), Interactive task learning: Humans, robots, and agents acquiring new tasks through natural interactions (pp. 91-110). Cambridge, MA: MIT Press.
  • Thorgrimsson, G., Fawcett, C., & Liszkowski, U. (2015). 1- and 2-year-olds’ expectations about third-party communicative actions. Infant Behavior and Development, 39, 53-66. doi:10.1016/j.infbeh.2015.02.002.

    Abstract

    Infants expect people to direct actions toward objects, and they respond to actions directed to themselves, but do they have expectations about actions directed to third parties? In two experiments, we used eye tracking to investigate 1- and 2-year-olds’ expectations about communicative actions addressed to a third party. Experiment 1 presented infants with videos where an adult (the Emitter) either uttered a sentence or produced non-speech sounds. The Emitter was either face-to-face with another adult (the Recipient) or the two were back-to-back. The Recipient did not respond to any of the sounds. We found that 2-, but not 1-year-olds looked quicker and longer at the Recipient following speech than non-speech, suggesting that they expected her to respond to speech. These effects were specific to the face-to-face context. Experiment 2 presented 1-year-olds with similar face-to-face exchanges but modified to engage infants and minimize task demands. The infants looked quicker to the Recipient following speech than non-speech, suggesting that they expected a response to speech. The study suggests that by 1 year of age infants expect communicative actions to be directed at a third-party listener.
  • Tilot, A. K., Frazier, T. W. 2., & Eng, C. (2015). Balancing proliferation and connectivity in PTEN -associated Autism Spectrum Disorder. Neurotherapeutics, 13(3), 609-619. doi:10.1007/s13311-015-0356-8.

    Abstract

    Germline mutations in PTEN, which encodes a widely expressed phosphatase, was mapped to 10q23 and identified as the susceptibility gene for Cowden syndrome, characterized by macrocephaly and high risks of breast, thyroid, and other cancers. The phenotypic spectrum of PTEN mutations expanded to include autism with macrocephaly only 10 years ago. Neurological studies of patients with PTEN-associated autism spectrum disorder (ASD) show increases in cortical white matter and a distinctive cognitive profile, including delayed language development with poor working memory and processing speed. Once a germline PTEN mutation is found, and a diagnosis of phosphatase and tensin homolog (PTEN) hamartoma tumor syndrome made, the clinical outlook broadens to include higher lifetime risks for multiple cancers, beginning in childhood with thyroid cancer. First described as a tumor suppressor, PTEN is a major negative regulator of the phosphatidylinositol 3-kinase/protein kinase B/mammalian target of rapamycin (mTOR) signaling pathway—controlling growth, protein synthesis, and proliferation. This canonical function combines with less well-understood mechanisms to influence synaptic plasticity and neuronal cytoarchitecture. Several excellent mouse models of Pten loss or dysfunction link these neural functions to autism-like behavioral abnormalities, such as altered sociability, repetitive behaviors, and phenotypes like anxiety that are often associated with ASD in humans. These models also show the promise of mTOR inhibitors as therapeutic agents capable of reversing phenotypes ranging from overgrowth to low social behavior. Based on these findings, therapeutic options for patients with PTEN hamartoma tumor syndrome and ASD are coming into view, even as new discoveries in PTEN biology add complexity to our understanding of this master regulator.

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  • Tilot, A. K., Vino, A., Kucera, K. S., Carmichael, D. A., Van den Heuvel, L., Den Hoed, J., Sidoroff-Dorso, A. V., Campbell, A., Porteous, D. J., St Pourcain, B., Van Leeuwen, T. M., Ward, J., Rouw, R., Simner, J., & Fisher, S. E. (2019). Investigating genetic links between grapheme-colour synaesthesia and neuropsychiatric traits. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 374: 20190026. doi:10.1098/rstb.2019.0026.

    Abstract

    Synaesthesia is a neurological phenomenon affecting perception, where triggering stimuli (e.g. letters and numbers) elicit unusual secondary sensory experiences (e.g. colours). Family-based studies point to a role for genetic factors in the development of this trait. However, the contributions of common genomic variation to synaesthesia have not yet been investigated. Here, we present the SynGenes cohort, the largest genotyped collection of unrelated people with grapheme–colour synaesthesia (n = 723). Synaesthesia has been associated with a range of other neuropsychological traits, including enhanced memory and mental imagery, as well as greater sensory sensitivity. Motivated by the prior literature on putative trait overlaps, we investigated polygenic scores derived from published genome-wide scans of schizophrenia and autism spectrum disorder (ASD), comparing our SynGenes cohort to 2181 non-synaesthetic controls. We found a very slight association between schizophrenia polygenic scores and synaesthesia (Nagelkerke's R2 = 0.0047, empirical p = 0.0027) and no significant association for scores related to ASD (Nagelkerke's R2 = 0.00092, empirical p = 0.54) or body mass index (R2 = 0.00058, empirical p = 0.60), included as a negative control. As sample sizes for studying common genomic variation continue to increase, genetic investigations of the kind reported here may yield novel insights into the shared biology between synaesthesia and other traits, to complement findings from neuropsychology and brain imaging.

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  • Todorovic, A., Schoffelen, J.-M., van Ede, F., Maris, E., & de Lange, F. P. (2015). Temporal expectation and attention jointly modulate auditory oscillatory activity in the beta band. PLoS One, 10(3): e0120288. doi:10.1371/journal.pone.0120288.

    Abstract

    The neural response to a stimulus is influenced by endogenous factors such as expectation and attention. Current research suggests that expectation and attention exert their effects in opposite directions, where expectation decreases neural activity in sensory areas, while attention increases it. However, expectation and attention are usually studied either in isolation or confounded with each other. A recent study suggests that expectation and attention may act jointly on sensory processing, by increasing the neural response to expected events when they are attended, but decreasing it when they are unattended. Here we test this hypothesis in an auditory temporal cueing paradigm using magnetoencephalography in humans. In our study participants attended to, or away from, tones that could arrive at expected or unexpected moments. We found a decrease in auditory beta band synchrony to expected (versus unexpected) tones if they were unattended, but no difference if they were attended. Modulations in beta power were already evident prior to the expected onset times of the tones. These findings suggest that expectation and attention jointly modulate sensory processing.
  • Torreira, F., Bögels, S., & Levinson, S. C. (2015). Breathing for answering: The time course of response planning in conversation. Frontiers in Psychology, 6: 284. doi:10.3389/fpsyg.2015.00284.

    Abstract

    In this study, we investigate the timing of pre-answer inbreaths in order to shed light on the time course of response planning and execution in conversational turn-taking. Using acoustic and inductive plethysmography recordings of seven dyadic conversations in Dutch, we show that pre-answer inbreaths in conversation typically begin briefly after the end of questions. We also show that the presence of a pre-answer inbreath usually co-occurs with substantially delayed answers, with a modal latency of 576 ms vs. 100 ms for answers not preceded by an inbreath. Based on previously reported minimal latencies for internal intercostal activation and the production of speech sounds, we propose that vocal responses, either in the form of a pre-utterance inbreath or of speech proper when an inbreath is not produced, are typically launched in reaction to information present in the last portion of the interlocutor’s turn. We also show that short responses are usually made on residual breath, while longer responses are more often preceded by an inbreath. This relation of inbreaths to answer length suggests that by the time an inbreath is launched, typically during the last few hundred milliseconds of the question, the length of the answer is often prepared to some extent. Together, our findings are consistent with a two-stage model of response planning in conversational turn-taking: early planning of content often carried out in overlap with the incoming turn, and late launching of articulation based on the identification of turn-final cues
  • Torreira, F. (2015). Melodic alternations in Spanish. In The Scottish Consortium for ICPhS 2015 (Ed.), Proceedings of the 18th International Congress of Phonetic Sciences (ICPhS 2015) (pp. 946.1-5). Glasgow, UK: The University of Glasgow. Retrieved from http://www.icphs2015.info/pdfs/Papers/ICPHS0946.pdf.

    Abstract

    This article describes how the tonal elements of two common Spanish intonation contours –the falling statement and the low-rising-falling request– align with the segmental string in broad-focus utterances differing in number of prosodic words. Using an imitation-and-completion task, we show that (i) the last stressed syllable of the utterance, traditionally viewed as carrying the ‘nuclear’ accent, associates with either a high or a low tonal element depending on phrase length (ii) that certain tonal elements can be realized or omitted depending on the availability of specific metrical positions in their intonational phrase, and (iii) that the high tonal element of the request contour associates with either a stressed syllable or an intonational phrase edge depending on phrase length. On the basis of these facts, and in contrast to previous descriptions of Spanish intonation relying on obligatory and constant nuclear contours (e.g., L* L% for all neutral statements), we argue for a less constrained intonational morphology involving tonal units linked to the segmental string via contour-specific principles.
  • Torreira, F., & Valtersson, E. (2015). Phonetic and visual cues to questionhood in French conversation. Phonetica, 72, 20-42. doi:10.1159/000381723.

    Abstract

    We investigate the extent to which French polar questions and continuation statements, two types of utterances with similar morphosyntactic and intonational forms but different pragmatic functions, can be distinguished in conversational data based on phonetic and visual bodily information. We show that the two utterance types can be distinguished well over chance level by automatic classification models including several phonetic and visual cues. We also show that a considerable amount of relevant phonetic and visual information is present before the last portion of the utterances, potentially assisting early speech act recognition by addressees. These findings indicate that bottom-up phonetic and visual cues may play an important role during the production and recognition of speech acts alongside top-down contextual information.
  • Tourtouri, E. N., Delogu, F., & Crocker, M. W. (2015). ERP indices of situated reference in visual contexts. In D. Noelle, R. Dale, A. Warlaumont, J. Yoshimi, T. Matlock, C. D. Jennings, & P. P. Maglio (Eds.), Proceedings of the 37th Annual Meeting of the Cognitive Science Society (CogSci 2015) (pp. 2422-2427). Austin: Cognitive Science Society.

    Abstract

    Violations of the maxims of Quantity occur when utterances provide more (over-specified) or less (under-specified) information than strictly required for referent identification. While behavioural datasuggest that under-specified expressions lead to comprehension difficulty and communicative failure, there is no consensus as to whether over-specified expressions are also detrimental to comprehension. In this study we shed light on this debate, providing neurophysiological evidence supporting the view that extra information facilitates comprehension. We further present novel evidence that referential failure due to under-specification is qualitatively different from explicit cases of referential failure, when no matching referential candidate is available in the context.
  • Tourtouri, E. N., Delogu, F., Sikos, L., & Crocker, M. W. (2019). Rational over-specification in visually-situated comprehension and production. Journal of Cultural Cognitive Science, 3(2), 175-202. doi:10.1007/s41809-019-00032-6.

    Abstract

    Contrary to the Gricean maxims of quantity (Grice, in: Cole, Morgan (eds) Syntax and semantics: speech acts, vol III, pp 41–58, Academic Press, New York, 1975), it has been repeatedly shown that speakers often include redundant information in their utterances (over-specifications). Previous research on referential communication has long debated whether this redundancy is the result of speaker-internal or addressee-oriented processes, while it is also unclear whether referential redundancy hinders or facilitates comprehension. We present an information-theoretic explanation for the use of over-specification in visually-situated communication, which quantifies the amount of uncertainty regarding the referent as entropy (Shannon in Bell Syst Tech J 5:10, https://doi.org/10.1002/j.1538-7305.1948.tb01338.x, 1948). Examining both the comprehension and production of over-specifications, we present evidence that (a) listeners’ processing is facilitated by the use of redundancy as well as by a greater reduction of uncertainty early on in the utterance, and (b) that at least for some speakers, listeners’ processing concerns influence their encoding of over-specifications: Speakers were more likely to use redundant adjectives when these adjectives reduced entropy to a higher degree than adjectives necessary for target identification.
  • Trenite, D., Volkers, L., Strengman, E., Schippers, H. M., Perquin, W., de Haan, G. J., Gkountidi, A. O., van't Slot, R., de Graaf, S. F., Jocic-Jakubi, B., Capovilla, G., Covanis, A., Parisi, P., Veggiotti, P., Brinciotti, M., Incorpora, G., Piccioli, M., Cantonetti, L., Berkovic, S. F., Scheffer, I. E. and 5 moreTrenite, D., Volkers, L., Strengman, E., Schippers, H. M., Perquin, W., de Haan, G. J., Gkountidi, A. O., van't Slot, R., de Graaf, S. F., Jocic-Jakubi, B., Capovilla, G., Covanis, A., Parisi, P., Veggiotti, P., Brinciotti, M., Incorpora, G., Piccioli, M., Cantonetti, L., Berkovic, S. F., Scheffer, I. E., Brilstra, E. H., Sonsma, A. C. M., Bader, A. J., De Kovel, C. G. F., & Koeleman, B. P. C. (2015). Clinical and genetic analysis of a family with two rare reflex epilepsies. Seizure-European Journal of Epilepsy, 29, 90-96. doi:10.1016/j.seizure.2015.03.020.

    Abstract

    Purpose: To determine clinical phenotypes, evolution and genetic background of a large family with a combination of two unusual forms of reflex epilepsies. Method: Phenotyping was performed in eighteen family members (10 F, 8 M) including standardized EEG recordings with intermittent photic stimulation (IPS). Genetic analyses (linkage scans, Whole Exome Sequencing (WES) and Functional studies) were performed using photoparoxysmal EEG responses (PPRs) as affection status. Results: The proband suffered from speaking induced jaw-jerks and increasing limb jerks evoked by flickering sunlight since about 50 years of age. Three of her family members had the same phenotype. Generalized PPRs were found in seven members (six above 50 years of age) with myoclonus during the PPR. Evolution was typical: Sensitivity to lights with migraine-like complaints around adolescence, followed by jerks evoked by lights and spontaneously with dropping of objects, and strong increase of light sensitivity and onset of talking induced jaw jerks around 50 years. Linkage analysis showed suggestive evidence for linkage to four genomic regions. All photosensitive family members shared a heterozygous R129C mutation in the SCNM1 gene that regulates splicing of voltage gated ion channels. Mutation screening of 134 unrelated PPR patients and 95 healthy controls, did not replicate these findings. Conclusion: This family presents a combination of two rare reflex epilepsies. Genetic analysis favors four genomic regions and points to a shared SCNM1 mutation that was not replicated in a general cohort of photosensitive subjects. Further genetic studies in families with similar combination of features are warranted. (C) 2015 British Epilepsy Association. Published by Elsevier Ltd. All rights reserved.
  • Trilsbeek, P., Broeder, D., Elbers, W., & Moreira, A. (2015). A sustainable archiving software solution for The Language Archive. In Proceedings of the 4th International Conference on Language Documentation and Conservation (ICLDC).
  • Troncoso Ruiz, A., Ernestus, M., & Broersma, M. (2019). Learning to produce difficult L2 vowels: The effects of awareness-rasing, exposure and feedback. In S. Calhoun, P. Escudero, M. Tabain, & P. Warren (Eds.), Proceedings of the 19th International Congress of Phonetic Sciences (ICPhS 2019) (pp. 1094-1098). Canberra, Australia: Australasian Speech Science and Technology Association Inc.
  • Trujillo, J. P., Gerrits, N. J. H. M., Vriend, C., Berendse, H. W., van den Heuvel, O. A., & van der Werf, Y. (2015). Impaired planning in Parkinson's disease is reflected by reduced brain activation and connectivity. Human Brain Mapping, 36(9), 3703-3715. doi:10.1002/hbm.22873.
  • Trujillo, J. P., Gerrits, N. J. H. M., Veltman, D. J., Berendse, H. W., van der Werf, Y. D., & van den Heuvel, O. A. (2015). Reduced neural connectivity but increased task-related activity during working memory in de novo Parkinson patients. Human Brain Mapping, 36(4), 1554-1566. doi:10.1002/hbm.22723.

    Abstract

    Objective: Patients with Parkinson's disease (PD) often suffer from impairments in executive functions, such as working memory deficits. It is widely held that dopamine depletion in the striatum contributes to these impairments through decreased activity and connectivity between task-related brain networks. We investigated this hypothesis by studying task-related network activity and connectivity within a sample of de novo patients with PD, versus healthy controls, during a visuospatial working memory task. Methods: Sixteen de novo PD patients and 35 matched healthy controls performed a visuospatial n-back task while we measured their behavioral performance and neural activity using functional magnetic resonance imaging. We constructed regions-of-interest in the bilateral inferior parietal cortex (IPC), bilateral dorsolateral prefrontal cortex (DLPFC), and bilateral caudate nucleus to investigate group differences in task-related activity. We studied network connectivity by assessing the functional connectivity of the bilateral DLPFC and by assessing effective connectivity within the frontoparietal and the frontostriatal networks. Results: PD patients, compared with controls, showed trend-significantly decreased task accuracy, significantly increased task-related activity in the left DLPFC and a trend-significant increase in activity of the right DLPFC, left caudate nucleus, and left IPC. Furthermore, we found reduced functional connectivity of the DLPFC with other task-related regions, such as the inferior and superior frontal gyri, in the PD group, and group differences in effective connectivity within the frontoparietal network. Interpretation: These findings suggest that the increase in working memory-related brain activity in PD patients is compensatory to maintain behavioral performance in the presence of network deficits. Hum Brain Mapp 36:1554-1566, 2015. (c) 2015 Wiley Periodicals, Inc.
  • Trujillo, J. P., Vaitonyte, J., Simanova, I., & Ozyurek, A. (2019). Toward the markerless and automatic analysis of kinematic features: A toolkit for gesture and movement research. Behavior Research Methods, 51(2), 769-777. doi:10.3758/s13428-018-1086-8.

    Abstract

    Action, gesture, and sign represent unique aspects of human communication that use form and movement to convey meaning. Researchers typically use manual coding of video data to characterize naturalistic, meaningful movements at various levels of description, but the availability of markerless motion-tracking technology allows for quantification of the kinematic features of gestures or any meaningful human movement. We present a novel protocol for extracting a set of kinematic features from movements recorded with Microsoft Kinect. Our protocol captures spatial and temporal features, such as height, velocity, submovements/strokes, and holds. This approach is based on studies of communicative actions and gestures and attempts to capture features that are consistently implicated as important kinematic aspects of communication. We provide open-source code for the protocol, a description of how the features are calculated, a validation of these features as quantified by our protocol versus manual coders, and a discussion of how the protocol can be applied. The protocol effectively quantifies kinematic features that are important in the production (e.g., characterizing different contexts) as well as the comprehension (e.g., used by addressees to understand intent and semantics) of manual acts. The protocol can also be integrated with qualitative analysis, allowing fast and objective demarcation of movement units, providing accurate coding even of complex movements. This can be useful to clinicians, as well as to researchers studying multimodal communication or human–robot interactions. By making this protocol available, we hope to provide a tool that can be applied to understanding meaningful movement characteristics in human communication.
  • Truong, D. T., Adams, A. K., Paniagua, S., Frijters, J. C., Boada, R., Hill, D. E., Lovett, M. W., Mahone, E. M., Willcutt, E. G., Wolf, M., Defries, J. C., Gialluisi, A., Francks, C., Fisher, S. E., Olson, R. K., Pennington, B. F., Smith, S. D., Bosson-Heenan, J., & Gruen, J. R. (2019). Multivariate genome-wide association study of rapid automatised naming and rapid alternating stimulus in Hispanic American and African–American youth. Journal of Medical Genetics, 56(8), 557-566. doi:10.1136/jmedgenet-2018-105874.

    Abstract

    Background Rapid automatised naming (RAN) and rapid alternating stimulus (RAS) are reliable predictors of reading disability. The underlying biology of reading disability is poorly understood. However, the high correlation among RAN, RAS and reading could be attributable to shared genetic factors that contribute to common biological mechanisms.

    Objective To identify shared genetic factors that contribute to RAN and RAS performance using a multivariate approach.

    Methods We conducted a multivariate genome-wide association analysis of RAN Objects, RAN Letters and RAS Letters/Numbers in a sample of 1331 Hispanic American and African–American youth. Follow-up neuroimaging genetic analysis of cortical regions associated with reading ability in an independent sample and epigenetic examination of extant data predicting tissue-specific functionality in the brain were also conducted.

    Results Genome-wide significant effects were observed at rs1555839 (p=4.03×10−8) and replicated in an independent sample of 318 children of European ancestry. Epigenetic analysis and chromatin state models of the implicated 70 kb region of 10q23.31 support active transcription of the gene RNLS in the brain, which encodes a catecholamine metabolising protein. Chromatin contact maps of adult hippocampal tissue indicate a potential enhancer–promoter interaction regulating RNLS expression. Neuroimaging genetic analysis in an independent, multiethnic sample (n=690) showed that rs1555839 is associated with structural variation in the right inferior parietal lobule.

    Conclusion This study provides support for a novel trait locus at chromosome 10q23.31 and proposes a potential gene–brain–behaviour relationship for targeted future functional analysis to understand underlying biological mechanisms for reading disability.

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  • Tsoi, E. Y. L., Yang, W., Chan, A. W. S., & Kidd, E. (2019). Mandarin-English speaking bilingual and Mandarin speaking monolingual children’s comprehension of relative clauses. Applied Psycholinguistics, 40(4), 933-964. doi:10.1017/S0142716419000079.

    Abstract

    The current study investigated the comprehension of subject and object relative clauses (RCs) in bilingual Mandarin-English children (N = 55, Mage = 7;5, SD = 1;8) and language-matched monolingual Mandarin-speaking children (N = 59, Mage = 5;4, SD = 0;7). The children completed a referent selection task that tested their comprehension of subject and object RCs, and standardised assessments of vocabulary knowledge. Results showed a very similar pattern of responding in both groups. In comparison to past studies of Cantonese, the bilingual and monolingual children both showed a significant subject-over-object RC advantage. An error analysis suggested that the children’s difficulty with object RCs reflected the tendency to interpret the sentential subject as the head noun. A subsequent corpus analysis suggested that children’s difficulty with object RCs may be in part due to distributional information favouring subject RC analyses. Individual differences analyses suggested cross-linguistic transfer from English to Mandarin in the bilingual children at the individual but not the group level, with the results indicating that comparative English-dominance makes children vulnerable to error
  • Tsuji, S., Mazuka, R., Cristia, A., & Fikkert, P. (2015). Even at 4 months, a labial is a good enough coronal, but not vice versa. Cognition, 134, 252-256. doi:10.1016/j.cognition.2014.10.009.

    Abstract

    Numerous studies have revealed an asymmetry tied to the perception of coronal place of articulation: participants accept a labial mispronunciation of a coronal target, but not vice versa. Whether or not this asymmetry is based on language-general properties or arises from language-specific experience has been a matter of debate. The current study suggests a bias of the first type by documenting an early, cross-linguistic asymmetry related to coronal place of articulation. Japanese and Dutch 4- and 6-month-old infants showed evidence of discrimination if they were habituated to a labial and then tested on a coronal sequence, but not vice versa. This finding has important implications for both phonological theories and infant speech perception research

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  • Udden, J., & Schoffelen, J.-M. (2015). Mother of all Unification Studies (MOUS). In A. E. Konopka (Ed.), Research Report 2013 | 2014 (pp. 21-22). Nijmegen: Max Planck Institute for Psycholinguistics. doi:10.17617/2.2236748.
  • Udden, J., Hulten, A., Bendt, K., Mineroff, Z., Kucera, K. S., Vino, A., Fedorenko, E., Hagoort, P., & Fisher, S. E. (2019). Towards robust functional neuroimaging genetics of cognition. Journal of Neuroscience, 39(44), 8778-8787. doi:10.1523/JNEUROSCI.0888-19.2019.

    Abstract

    A commonly held assumption in cognitive neuroscience is that, because measures of human brain function are closer to underlying biology than distal indices of behavior/cognition, they hold more promise for uncovering genetic pathways. Supporting this view is an influential fMRI-based study of sentence reading/listening by Pinel et al. (2012), who reported that common DNA variants in specific candidate genes were associated with altered neural activation in language-related regions of healthy individuals that carried them. In particular, different single-nucleotide polymorphisms (SNPs) of FOXP2 correlated with variation in task-based activation in left inferior frontal and precentral gyri, whereas a SNP at the KIAA0319/TTRAP/THEM2 locus was associated with variable functional asymmetry of the superior temporal sulcus. Here, we directly test each claim using a closely matched neuroimaging genetics approach in independent cohorts comprising 427 participants, four times larger than the original study of 94 participants. Despite demonstrating power to detect associations with substantially smaller effect sizes than those of the original report, we do not replicate any of the reported associations. Moreover, formal Bayesian analyses reveal substantial to strong evidence in support of the null hypothesis (no effect). We highlight key aspects of the original investigation, common to functional neuroimaging genetics studies, which could have yielded elevated false-positive rates. Genetic accounts of individual differences in cognitive functional neuroimaging are likely to be as complex as behavioral/cognitive tests, involving many common genetic variants, each of tiny effect. Reliable identification of true biological signals requires large sample sizes, power calculations, and validation in independent cohorts with equivalent paradigms.

    SIGNIFICANCE STATEMENT A pervasive idea in neuroscience is that neuroimaging-based measures of brain function, being closer to underlying neurobiology, are more amenable for uncovering links to genetics. This is a core assumption of prominent studies that associate common DNA variants with altered activations in task-based fMRI, despite using samples (10–100 people) that lack power for detecting the tiny effect sizes typical of genetically complex traits. Here, we test central findings from one of the most influential prior studies. Using matching paradigms and substantially larger samples, coupled to power calculations and formal Bayesian statistics, our data strongly refute the original findings. We demonstrate that neuroimaging genetics with task-based fMRI should be subject to the same rigorous standards as studies of other complex traits.
  • The UK10K Consortium (2015). The UK10K project identifies rare variants in health and disease. Nature, 526(7571), 82-89. doi:10.1038/nature14962.

    Abstract

    The contribution of rare and low-frequency variants to human traits is largely unexplored. Here we describe insights from sequencing whole genomes (low read depth, 7×) or exomes (high read depth, 80×) of nearly 10,000 individuals from population-based and disease collections. In extensively phenotyped cohorts we characterize over 24 million novel sequence variants, generate a highly accurate imputation reference panel and identify novel alleles associated with levels of triglycerides (APOB), adiponectin (ADIPOQ) and low-density lipoprotein cholesterol (LDLR and RGAG1) from single-marker and rare variant aggregation tests. We describe population structure and functional annotation of rare and low-frequency variants, use the data to estimate the benefits of sequencing for association studies, and summarize lessons from disease-specific collections. Finally, we make available an extensive resource, including individual-level genetic and phenotypic data and web-based tools to facilitate the exploration of association results.
  • Ünal, E., & Papafragou, A. (2019). How children identify events from visual experience. Language Learning and Development, 15(2), 138-156. doi:10.1080/15475441.2018.1544075.

    Abstract

    Three experiments explored how well children recognize events from different types of visual experience: either by directly seeing an event or by indirectly experiencing it from post-event visual evidence. In Experiment 1, 4- and 5- to 6-year-old Turkish-speaking children (n = 32) successfully recognized events through either direct or indirect visual access. In Experiment 2, a new group of 4- and 5- to 6-year-olds (n = 37) reliably attributed event recognition to others who had direct or indirect visual access to events (even though performance was lower than Experiment 1). In both experiments, although children’s accu- racy improved with age, there was no difference between the two types of access. Experiment 3 replicated the findings from the youngest participants of Experiments 1 and 2 with a matched sample of English-speaking 4-year-olds (n = 37). Thus children can use different kinds of visual experience to support event representations in themselves and others.
  • Unsworth, S., Persson, L., Prins, T., & De Bot, K. (2015). An investigation of factors affecting early foreign language learning in the Netherlands. Applied Linguistics, 36(5), 527-548. doi:10.1093/applin/amt052.
  • Uzbas, F., Opperer, F., Sönmezer, C., Shaposhnikov, D., Sass, S., Krendl, C., Angerer, P., Theis, F. J., Mueller, N. S., & Drukker, M. (2019). BART-Seq: Cost-effective massively parallelized targeted sequencing for genomics, transcriptomics, and single-cell analysis. Genome Biology, 20: 155. doi:10.1186/s13059-019-1748-6.

    Abstract

    We describe a highly sensitive, quantitative, and inexpensive technique for targeted sequencing of transcript cohorts or genomic regions from thousands of bulk samples or single cells in parallel. Multiplexing is based on a simple method that produces extensive matrices of diverse DNA barcodes attached to invariant primer sets, which are all pre-selected and optimized in silico. By applying the matrices in a novel workflow named Barcode Assembly foR Targeted Sequencing (BART-Seq), we analyze developmental states of thousands of single human pluripotent stem cells, either in different maintenance media or upon Wnt/β-catenin pathway activation, which identifies the mechanisms of differentiation induction. Moreover, we apply BART-Seq to the genetic screening of breast cancer patients and identify BRCA mutations with very high precision. The processing of thousands of samples and dynamic range measurements that outperform global transcriptomics techniques makes BART-Seq first targeted sequencing technique suitable for numerous research applications.

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  • Uzbas, F., May, I. D., Parisi, A. M., Thompson, S. K., Kaya, A., Perkins, A. D., & Memili, E. (2015). Molecular Physiognomies and Applications of Adipose-Derived Stem Cells. Stem Cell Reviews and Reports, 11, 298-308. doi:10.1007/s12015-014-9578-0.

    Abstract

    Adipose-derived stromal/stem cells (ASC) are multipotent with abilities to differentiate into multiple lineages including connective tissue and neural cells. Despite unlimited opportunity and needs for human and veterinary regenerative medicine, applications of adipose-derived stromal/stem cells are at present very limited. Furthermore, the fundamental biological factors regulating stemness in ASC and their stable differentiation into other tissue cells are not fully understood. The objective of this review was to provide an update on the current knowledge of the nature and isolation, molecular and epigenetic determinants of the potency, and applications of adipose-derived stromal/stem cells, as well as challenges and future directions. The first quarter of the review focuses on the nature of ASC, namely their definition, origin, isolation and sorting methods and multilineage differentiation potential, often with a comparison to mesenchymal stem cells of bone marrow. Due to the indisputable role of epigenetic regulation on cell identities, epigenetic modifications (DNA methylation, chromatin remodeling and microRNAs) are described broadly in stem cells but with a focus on ASC. The final sections provide insights into the current and potential applications of ASC in human and veterinary regenerative medicine.
  • van der Burght, C. L., Goucha, T., Friederici, A. D., Kreitewolf, J., & Hartwigsen, G. (2019). Intonation guides sentence processing in the left inferior frontal gyrus. Cortex, 117, 122-134. doi:10.1016/j.cortex.2019.02.011.

    Abstract

    Speech prosody, the variation in sentence melody and rhythm, plays a crucial role in sentence comprehension. Specifically, changes in intonational pitch along a sentence can affect our understanding of who did what to whom. To date, it remains unclear how the brain processes this particular use of intonation and which brain regions are involved. In particular, one central matter of debate concerns the lateralisation of intonation processing. To study the role of intonation in sentence comprehension, we designed a functional MRI experiment in which participants listened to spoken sentences. Critically, the interpretation of these sentences depended on either intonational or grammatical cues. Our results
    showed stronger functional activity in the left inferior frontal gyrus (IFG) when the intonational cue was crucial for sentence comprehension compared to when it was not. When instead a grammatical cue was crucial for sentence comprehension, we found involvement of an overlapping region in the left IFG, as well as in a posterior temporal
    region. A further analysis revealed that the lateralisation of intonation processing depends on its role in syntactic processing: activity in the IFG was lateralised to the left hemisphere when intonation was the only source of information to comprehend the sentence. In contrast, activity in the IFG was right-lateralised when intonation did not contribute to sentence comprehension. Together, these results emphasise the key role of the left IFG in sentence comprehension, showing the importance of this region when intonation
    establishes sentence structure. Furthermore, our results provide evidence for the theory
    that the lateralisation of prosodic processing is modulated by its linguistic role.
  • Van Dooren, A., Tulling, M., Cournane, A., & Hacquard, V. (2019). Discovering modal polysemy: Lexical aspect might help. In M. Brown, & B. Dailey (Eds.), BUCLD 43: Proceedings of the 43rd annual Boston University Conference on Language Development (pp. 203-216). Sommerville, MA: Cascadilla Press.
  • Van Leeuwen, T. M., Van Petersen, E., Burghoorn, F., Dingemanse, M., & Van Lier, R. (2019). Autistic traits in synaesthesia: Atypical sensory sensitivity and enhanced perception of details. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 374: 20190024. doi:10.1098/rstb.2019.0024.

    Abstract

    In synaesthetes specific sensory stimuli (e.g., black letters) elicit additional experiences (e.g. colour). Synaesthesia is highly prevalent among individuals with autism spectrum disorder but the mechanisms of this co-occurrence are not clear. We hypothesized autism and synaesthesia share atypical sensory sensitivity and perception. We assessed autistic traits, sensory sensitivity, and visual perception in two synaesthete populations. In Study 1, synaesthetes (N=79, of different types) scored higher than non-synaesthetes (N=76) on the Attention-to-detail and Social skills subscales of the Autism Spectrum Quotient indexing autistic traits, and on the Glasgow Sensory Questionnaire indexing sensory hypersensitivity and hyposensitivity which frequently occur in autism. Synaesthetes performed two local/global visual tasks because individuals with autism typically show a bias toward detail processing. In synaesthetes, elevated motion coherence thresholds suggested reduced global motion perception and higher accuracy on an embedded figures task suggested enhanced local perception. In Study 2 sequence-space synaesthetes (N=18) completed the same tasks. Questionnaire and embedded figures results qualitatively resembled Study 1 results but no significant group differences with non-synaesthetes (N=20) were obtained. Unexpectedly, sequence-space synaesthetes had reduced motion coherence thresholds. Altogether, our studies suggest atypical sensory sensitivity and a bias towards detail processing are shared features of synaesthesia and autism spectrum disorder.
  • Van den Stock, J., Tamietto, M., Hervais-Adelman, A., Pegna, A. J., & de Gelder, B. (2015). Body recognition in a patient with bilateral primary visual cortex lesions [Correspondence]. Biological Psychiatry, 77(7), E31-E33. doi:10.1016/j.biopsych.2013.06.023.
  • Van Paridon, J., Roelofs, A., & Meyer, A. S. (2019). A lexical bottleneck in shadowing and translating of narratives. Language, Cognition and Neuroscience, 34(6), 803-812. doi:10.1080/23273798.2019.1591470.

    Abstract

    In simultaneous interpreting, speech comprehension and production processes have to be coordinated in close temporal proximity. To examine the coordination, Dutch-English bilingual participants were presented with narrative fragments recorded in English at speech rates varying from 100 to 200 words per minute and they were asked to translate the fragments into Dutch (interpreting) or repeat them in English (shadowing). Interpreting yielded more errors than shadowing at every speech rate, and increasing speech rate had a stronger negative effect on interpreting than on shadowing. To understand the differential effect of speech rate, a computational model was created of sub-lexical and lexical processes in comprehension and production. Computer simulations revealed that the empirical findings could be captured by assuming a bottleneck preventing simultaneous lexical selection in production and comprehension. To conclude, our empirical and modelling results suggest the existence of a lexical bottleneck that limits the translation of narratives at high speed.

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    plcp_a_1591470_sm5183.docx
  • van der Valk, R. J. P., Kreiner-Møller, E., Kooijman, M. N., Guxens, M., Stergiakouli, E., Sääf, A., Bradfield, J. P., Geller, F., Hayes, M. G., Cousminer, D. L., Körner, A., Thiering, E., Curtin, J. A., Myhre, R., Huikari, V., Joro, R., Kerkhof, M., Warrington, N. M., Pitkänen, N., Ntalla, I. and 98 morevan der Valk, R. J. P., Kreiner-Møller, E., Kooijman, M. N., Guxens, M., Stergiakouli, E., Sääf, A., Bradfield, J. P., Geller, F., Hayes, M. G., Cousminer, D. L., Körner, A., Thiering, E., Curtin, J. A., Myhre, R., Huikari, V., Joro, R., Kerkhof, M., Warrington, N. M., Pitkänen, N., Ntalla, I., Horikoshi, M., Veijola, R., Freathy, R. M., Teo, Y.-Y., Barton, S. J., Evans, D. M., Kemp, J. P., St Pourcain, B., Ring, S. M., Davey Smith, G., Bergström, A., Kull, I., Hakonarson, H., Mentch, F. D., Bisgaard, H., Chawes, B., Stokholm, J., Waage, J., Eriksen, P., Sevelsted, A., Melbye, M., van Duijn, C. M., Medina-Gomez, C., Hofman, A., de Jongste, J. C., Taal, H. R., Uitterlinden, A. G., Armstrong, L. L., Eriksson, J., Palotie, A., Bustamante, M., Estivill, X., Gonzalez, J. R., Llop, S., Kiess, W., Mahajan, A., Flexeder, C., Tiesler, C. M. T., Murray, C. S., Simpson, A., Magnus, P., Sengpiel, V., Hartikainen, A.-L., Keinanen-Kiukaanniemi, S., Lewin, A., Da Silva Couto Alves, A., Blakemore, A. I., Buxton, J. L., Kaakinen, M., Rodriguez, A., Sebert, S., Vaarasmaki, M., Lakka, T., Lindi, V., Gehring, U., Postma, D. S., Ang, W., Newnham, J. P., Lyytikäinen, L.-P., Pahkala, K., Raitakari, O. T., Panoutsopoulou, K., Zeggini, E., Boomsma, D. I., Groen-Blokhuis, M., Ilonen, J., Franke, L., Hirschhorn, J. N., Pers, T. H., Liang, L., Huang, J., Hocher, B., Knip, M., Saw, S.-M., Holloway, J. W., Melén, E., Grant, S. F. A., Feenstra, B., Lowe, W. L., Widén, E., Sergeyev, E., Grallert, H., Custovic, A., Jacobsson, B., Jarvelin, M.-R., Atalay, M., Koppelman, G. H., Pennell, C. E., Niinikoski, H., Dedoussis, G. V., Mccarthy, M. I., Frayling, T. M., Sunyer, J., Timpson, N. J., Rivadeneira, F., Bønnelykke, K., Jaddoe, V. W. V., & Early Growth Genetics (EGG) Consortium (2015). A novel common variant in DCST2 is associated with length in early life and height in adulthood. Human Molecular Genetics, 24(4), 1155-1168. doi:10.1093/hmg/ddu510.

    Abstract

    Common genetic variants have been identified for adult height, but not much is known about the genetics of skeletal growth in early life. To identify common genetic variants that influence fetal skeletal growth, we meta-analyzed 22 genome-wide association studies (Stage 1; N = 28 459). We identified seven independent top single nucleotide polymorphisms (SNPs) (P < 1 × 10(-6)) for birth length, of which three were novel and four were in or near loci known to be associated with adult height (LCORL, PTCH1, GPR126 and HMGA2). The three novel SNPs were followed-up in nine replication studies (Stage 2; N = 11 995), with rs905938 in DC-STAMP domain containing 2 (DCST2) genome-wide significantly associated with birth length in a joint analysis (Stages 1 + 2; β = 0.046, SE = 0.008, P = 2.46 × 10(-8), explained variance = 0.05%). Rs905938 was also associated with infant length (N = 28 228; P = 5.54 × 10(-4)) and adult height (N = 127 513; P = 1.45 × 10(-5)). DCST2 is a DC-STAMP-like protein family member and DC-STAMP is an osteoclast cell-fusion regulator. Polygenic scores based on 180 SNPs previously associated with human adult stature explained 0.13% of variance in birth length. The same SNPs explained 2.95% of the variance of infant length. Of the 180 known adult height loci, 11 were genome-wide significantly associated with infant length (SF3B4, LCORL, SPAG17, C6orf173, PTCH1, GDF5, ZNFX1, HHIP, ACAN, HLA locus and HMGA2). This study highlights that common variation in DCST2 influences variation in early growth and adult height.
  • Van Leeuwen, E. J. C., Kendal, R. L., Tennie, C., & Haun, D. B. M. (2015). Conformity and its look-a-likes. Animal Behaviour. doi:10.1016/j.anbehav.2015.07.030.
  • Van den Bos, E., & Poletiek, F. H. (2019). Correction to: Effects of grammar complexity on artificial grammar learning (vol 36, pg 1122, 2008). Memory & Cognition, 47(8), 1619-1620. doi:10.3758/s13421-019-00946-0.

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