Displaying 601 - 700 of 744
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Smulders, F. T. Y., Ten Oever, S., Donkers, F. C. L., Quaedflieg, C. W. E. M., & Van de Ven, V. (2018). Single-trial log transformation is optimal in frequency analysis of resting EEG alpha. European Journal of Neuroscience, 48(7), 2585-2598. doi:10.1111/ejn.13854.
Abstract
The appropriate definition and scaling of the magnitude of electroencephalogram (EEG) oscillations is an underdeveloped area. The aim of this study was to optimize the analysis of resting EEG alpha magnitude, focusing on alpha peak frequency and nonlinear transformation of alpha power. A family of nonlinear transforms, Box-Cox transforms, were applied to find the transform that (a) maximized a non-disputed effect: the increase in alpha magnitude when the eyes are closed (Berger effect), and (b) made the distribution of alpha magnitude closest to normal across epochs within each participant, or across participants. The transformations were performed either at the single epoch level or at the epoch-average level. Alpha peak frequency showed large individual differences, yet good correspondence between various ways to estimate it in 2min of eyes-closed and 2min of eyes-open resting EEG data. Both alpha magnitude and the Berger effect were larger for individual alpha than for a generic (8-12Hz) alpha band. The log-transform on single epochs (a) maximized the t-value of the contrast between the eyes-open and eyes-closed conditions when tested within each participant, and (b) rendered near-normally distributed alpha power across epochs and participants, thereby making further transformation of epoch averages superfluous. The results suggest that the log-normal distribution is a fundamental property of variations in alpha power across time in the order of seconds. Moreover, effects on alpha power appear to be multiplicative rather than additive. These findings support the use of the log-transform on single epochs to achieve appropriate scaling of alpha magnitude. -
Snijders Blok, L., Rousseau, J., Twist, J., Ehresmann, S., Takaku, M., Venselaar, H., Rodan, L. H., Nowak, C. B., Douglas, J., Swoboda, K. J., Steeves, M. A., Sahai, I., Stumpel, C. T. R. M., Stegmann, A. P. A., Wheeler, P., Willing, M., Fiala, E., Kochhar, A., Gibson, W. T., Cohen, A. S. A. and 59 moreSnijders Blok, L., Rousseau, J., Twist, J., Ehresmann, S., Takaku, M., Venselaar, H., Rodan, L. H., Nowak, C. B., Douglas, J., Swoboda, K. J., Steeves, M. A., Sahai, I., Stumpel, C. T. R. M., Stegmann, A. P. A., Wheeler, P., Willing, M., Fiala, E., Kochhar, A., Gibson, W. T., Cohen, A. S. A., Agbahovbe, R., Innes, A. M., Au, P. Y. B., Rankin, J., Anderson, I. J., Skinner, S. A., Louie, R. J., Warren, H. E., Afenjar, A., Keren, B., Nava, C., Buratti, J., Isapof, A., Rodriguez, D., Lewandowski, R., Propst, J., Van Essen, T., Choi, M., Lee, S., Chae, J. H., Price, S., Schnur, R. E., Douglas, G., Wentzensen, I. M., Zweier, C., Reis, A., Bialer, M. G., Moore, C., Koopmans, M., Brilstra, E. H., Monroe, G. R., Van Gassen, K. L. I., Van Binsbergen, E., Newbury-Ecob, R., Bownass, L., Bader, I., Mayr, J. A., Wortmann, S. B., Jakielski, K. J., Strand, E. A., Kloth, K., Bierhals, T., The DDD study, Roberts, J. D., Petrovich, R. M., Machida, S., Kurumizaka, H., Lelieveld, S., Pfundt, R., Jansen, S., Derizioti, P., Faivre, L., Thevenon, J., Assoum, M., Shriberg, L., Kleefstra, T., Brunner, H. G., Wade, P. A., Fisher, S. E., & Campeau, P. M. (2018). CHD3 helicase domain mutations cause a neurodevelopmental syndrome with macrocephaly and impaired speech and language. Nature Communications, 9: 4619. doi:10.1038/s41467-018-06014-6.
Abstract
Chromatin remodeling is of crucial importance during brain development. Pathogenic
alterations of several chromatin remodeling ATPases have been implicated in neurodevelopmental
disorders. We describe an index case with a de novo missense mutation in CHD3,
identified during whole genome sequencing of a cohort of children with rare speech disorders.
To gain a comprehensive view of features associated with disruption of this gene, we use a
genotype-driven approach, collecting and characterizing 35 individuals with de novo CHD3
mutations and overlapping phenotypes. Most mutations cluster within the ATPase/helicase
domain of the encoded protein. Modeling their impact on the three-dimensional structure
demonstrates disturbance of critical binding and interaction motifs. Experimental assays with
six of the identified mutations show that a subset directly affects ATPase activity, and all but
one yield alterations in chromatin remodeling. We implicate de novo CHD3 mutations in a
syndrome characterized by intellectual disability, macrocephaly, and impaired speech and
language.Additional information
41467_2018_6014_MOESM1_ESM.pdf 41467_2018_6014_MOESM4_ESM.xlsx 41467_2018_6014_MOESM5_ESM.xlsx -
Snijders Blok, L., Hiatt, S. M., Bowling, K. M., Prokop, J. W., Engel, K. L., Cochran, J. N., Bebin, E. M., Bijlsma, E. K., Ruivenkamp, C. A. L., Terhal, P., Simon, M. E. H., Smith, R., Hurst, J. A., The DDD study, MCLaughlin, H., Person, R., Crunk, A., Wangler, M. F., Streff, H., Symonds, J. D., Zuberi, S. M. and 11 moreSnijders Blok, L., Hiatt, S. M., Bowling, K. M., Prokop, J. W., Engel, K. L., Cochran, J. N., Bebin, E. M., Bijlsma, E. K., Ruivenkamp, C. A. L., Terhal, P., Simon, M. E. H., Smith, R., Hurst, J. A., The DDD study, MCLaughlin, H., Person, R., Crunk, A., Wangler, M. F., Streff, H., Symonds, J. D., Zuberi, S. M., Elliott, K. S., Sanders, V. R., Masunga, A., Hopkin, R. J., Dubbs, H. A., Ortiz-Gonzalez, X. R., Pfundt, R., Brunner, H. G., Fisher, S. E., Kleefstra, T., & Cooper, G. M. (2018). De novo mutations in MED13, a component of the Mediator complex, are associated with a novel neurodevelopmental disorder. Human Genetics, 137(5), 375-388. doi:10.1007/s00439-018-1887-y.
Abstract
Many genetic causes of developmental delay and/or intellectual disability (DD/ID) are extremely rare, and robust discovery of these requires both large-scale DNA sequencing and data sharing. Here we describe a GeneMatcher collaboration which led to a cohort of 13 affected individuals harboring protein-altering variants, 11 of which are de novo, in MED13; the only inherited variant was transmitted to an affected child from an affected mother. All patients had intellectual disability and/or developmental delays, including speech delays or disorders. Other features that were reported in two or more patients include autism spectrum disorder, attention deficit hyperactivity disorder, optic nerve abnormalities, Duane anomaly, hypotonia, mild congenital heart abnormalities, and dysmorphisms. Six affected individuals had mutations that are predicted to truncate the MED13 protein, six had missense mutations, and one had an in-frame-deletion of one amino acid. Out of the seven non-truncating mutations, six clustered in two specific locations of the MED13 protein: an N-terminal and C-terminal region. The four N-terminal clustering mutations affect two adjacent amino acids that are known to be involved in MED13 ubiquitination and degradation, p.Thr326 and p.Pro327. MED13 is a component of the CDK8-kinase module that can reversibly bind Mediator, a multi-protein complex that is required for Polymerase II transcription initiation. Mutations in several other genes encoding subunits of Mediator have been previously shown to associate with DD/ID, including MED13L, a paralog of MED13. Thus, our findings add MED13 to the group of CDK8-kinase module-associated disease genesAdditional information
https://link.springer.com/article/10.1007%2Fs00439-018-1887-y#SupplementaryMate… -
Snijders, T. M., Benders, T., & Fikkert, P. (2020). Infants segment words from songs - an EEG study. Brain Sciences, 10( 1): 39. doi:10.3390/brainsci10010039.
Abstract
Children’s songs are omnipresent and highly attractive stimuli in infants’ input. Previous work suggests that infants process linguistic–phonetic information from simplified sung melodies. The present study investigated whether infants learn words from ecologically valid children’s songs. Testing 40 Dutch-learning 10-month-olds in a familiarization-then-test electroencephalography (EEG) paradigm, this study asked whether infants can segment repeated target words embedded in songs during familiarization and subsequently recognize those words in continuous speech in the test phase. To replicate previous speech work and compare segmentation across modalities, infants participated in both song and speech sessions. Results showed a positive event-related potential (ERP) familiarity effect to the final compared to the first target occurrences during both song and speech familiarization. No evidence was found for word recognition in the test phase following either song or speech. Comparisons across the stimuli of the present and a comparable previous study suggested that acoustic prominence and speech rate may have contributed to the polarity of the ERP familiarity effect and its absence in the test phase. Overall, the present study provides evidence that 10-month-old infants can segment words embedded in songs, and it raises questions about the acoustic and other factors that enable or hinder infant word segmentation from songs and speech. -
Sønderby, I. E., Gústafsson, Ó., Doan, N. T., Hibar, D. P., Martin-Brevet, S., Abdellaoui, A., Ames, D., Amunts, K., Andersson, M., Armstrong, N. J., Bernard, M., Blackburn, N., Blangero, J., Boomsma, D. I., Bralten, J., Brattbak, H.-R., Brodaty, H., Brouwer, R. M., Bülow, R., Calhoun, V. and 133 moreSønderby, I. E., Gústafsson, Ó., Doan, N. T., Hibar, D. P., Martin-Brevet, S., Abdellaoui, A., Ames, D., Amunts, K., Andersson, M., Armstrong, N. J., Bernard, M., Blackburn, N., Blangero, J., Boomsma, D. I., Bralten, J., Brattbak, H.-R., Brodaty, H., Brouwer, R. M., Bülow, R., Calhoun, V., Caspers, S., Cavalleri, G., Chen, C.-H., Cichon, S., Ciufolini, S., Corvin, A., Crespo-Facorro, B., Curran, J. E., Dale, A. M., Dalvie, S., Dazzan, P., De Geus, E. J. C., De Zubicaray, G. I., De Zwarte, S. M. C., Delanty, N., Den Braber, A., Desrivières, S., Donohoe, G., Draganski, B., Ehrlich, S., Espeseth, T., Fisher, S. E., Franke, B., Frouin, V., Fukunaga, M., Gareau, T., Glahn, D. C., Grabe, H., Groenewold, N. A., Haavik, J., Håberg, A., Hashimoto, R., Hehir-Kwa, J. Y., Heinz, A., Hillegers, M. H. J., Hoffmann, P., Holleran, L., Hottenga, J.-J., Hulshoff, H. E., Ikeda, M., Jahanshad, N., Jernigan, T., Jockwitz, C., Johansson, S., Jonsdottir, G. A., Jönsson, E. G., Kahn, R., Kaufmann, T., Kelly, S., Kikuchi, M., Knowles, E. E. M., Kolskår, K. K., Kwok, J. B., Le Hellard, S., Leu, C., Liu, J., Lundervold, A. J., Lundervold, A., Martin, N. G., Mather, K., Mathias, S. R., McCormack, M., McMahon, K. L., McRae, A., Milaneschi, Y., Moreau, C., Morris, D., Mothersill, D., Mühleisen, T. W., Murray, R., Nordvik, J. E., Nyberg, L., Olde Loohuis, L. M., Ophoff, R., Paus, T., Pausova, Z., Penninx, B., Peralta, J. M., Pike, B., Prieto, C., Pudas, S., Quinlan, E., Quintana, D. S., Reinbold, C. S., Reis Marques, T., Reymond, A., Richard, G., Rodriguez-Herreros, B., Roiz-Santiañez, R., Rokicki, J., Rucker, J., Sachdev, P., Sanders, A.-M., Sando, S. B., Schmaal, L., Schofield, P. R., Schork, A. J., Schumann, G., Shin, J., Shumskaya, E., Sisodiya, S., Steen, V. M., Stein, D. J., Steinberg, S., Strike, L., Teumer, A., Thalamuthu, A., Tordesillas-Gutierrez, D., Turner, J., Ueland, T., Uhlmann, A., Ulfarsson, M. O., Van 't Ent, D., Van der Meer, D., Van Haren, N. E. M., Vaskinn, A., Vassos, E., Walters, G. B., Wang, Y., Wen, W., Whelan, C. D., Wittfeld, K., Wright, M., Yamamori, H., Zayats, T., Agartz, I., Westlye, L. T., Jacquemont, S., Djurovic, S., Stefansson, H., Stefansson, K., Thompson, P., & Andreassen, O. A. (2020). Dose response of the 16p11.2 distal copy number variant on intracranial volume and basal ganglia. Molecular Psychiatry, 25, 584-602. doi:10.1038/s41380-018-0118-1.
Abstract
Carriers of large recurrent copy number variants (CNVs) have a higher risk of developing neurodevelopmental disorders. The 16p11.2 distal CNV predisposes carriers to e.g., autism spectrum disorder and schizophrenia. We compared subcortical brain volumes of 12 16p11.2 distal deletion and 12 duplication carriers to 6882 non-carriers from the large-scale brain Magnetic Resonance Imaging collaboration, ENIGMA-CNV. After stringent CNV calling procedures, and standardized FreeSurfer image analysis, we found negative dose-response associations with copy number on intracranial volume and on regional caudate, pallidum and putamen volumes (β = −0.71 to −1.37; P < 0.0005). In an independent sample, consistent results were obtained, with significant effects in the pallidum (β = −0.95, P = 0.0042). The two data sets combined showed significant negative dose-response for the accumbens, caudate, pallidum, putamen and ICV (P = 0.0032, 8.9 × 10−6, 1.7 × 10−9, 3.5 × 10−12 and 1.0 × 10−4, respectively). Full scale IQ was lower in both deletion and duplication carriers compared to non-carriers. This is the first brain MRI study of the impact of the 16p11.2 distal CNV, and we demonstrate a specific effect on subcortical brain structures, suggesting a neuropathological pattern underlying the neurodevelopmental syndromes -
Speed, L. J., Wnuk, E., & Majid, A. (2018). Studying psycholinguistics out of the lab. In A. De Groot, & P. Hagoort (
Eds. ), Research methods in psycholinguistics and the neurobiology of language: A practical guide (pp. 190-207). Hoboken: Wiley.Abstract
Traditional psycholinguistic studies take place in controlled experimental labs and typically involve testing undergraduate psychology or linguistics students. Investigating psycholinguistics in this manner calls into question the external validity of findings, that is, the extent to which research findings generalize across languages and cultures, as well as ecologically valid settings. Here we consider three ways in which psycholinguistics can be taken out of the lab. First, researchers can conduct cross-cultural fieldwork in diverse languages and cultures. Second, they can conduct online experiments or experiments in institutionalized public spaces (e.g., museums) to obtain large, diverse participant samples. And, third, researchers can perform studies in more ecologically valid settings, to increase the real-world generalizability of findings. By moving away from the traditional lab setting, psycholinguists can enrich their understanding of language use in all its rich and diverse contexts. -
Speed, L. J., & Majid, A. (2018). An exception to mental simulation: No evidence for embodied odor language. Cognitive Science, 42(4), 1146-1178. doi:10.1111/cogs.12593.
Abstract
Do we mentally simulate olfactory information? We investigated mental simulation of odors and sounds in two experiments. Participants retained a word while they smelled an odor or heard a sound, then rated odor/sound intensity and recalled the word. Later odor/sound recognition was also tested, and pleasantness and familiarity judgments were collected. Word recall was slower when the sound and sound-word mismatched (e.g., bee sound with the word typhoon). Sound recognition was higher when sounds were paired with a match or near-match word (e.g., bee sound with bee or buzzer). This indicates sound-words are mentally simulated. However, using the same paradigm no memory effects were observed for odor. Instead it appears odor-words only affect lexical-semantic representations, demonstrated by higher ratings of odor intensity and pleasantness when an odor was paired with a match or near-match word (e.g., peach odor with peach or mango). These results suggest fundamental differences in how odor and sound-words are represented.Additional information
cogs12593-sup-0001-SupInfo.docx -
Speed, L., & Majid, A. (2018). Music and odor in harmony: A case of music-odor synaesthesia. In C. Kalish, M. Rau, J. Zhu, & T. T. Rogers (
Eds. ), Proceedings of the 40th Annual Conference of the Cognitive Science Society (CogSci 2018) (pp. 2527-2532). Austin, TX: Cognitive Science Society.Abstract
We report an individual with music-odor synaesthesia who experiences automatic and vivid odor sensations when she hears music. S’s odor associations were recorded on two days, and compared with those of two control participants. Overall, S produced longer descriptions, and her associations were of multiple odors at once, in comparison to controls who typically reported a single odor. Although odor associations were qualitatively different between S and controls, ratings of the consistency of their descriptions did not differ. This demonstrates that crossmodal associations between music and odor exist in non-synaesthetes too. We also found that S is better at discriminating between odors than control participants, and is more likely to experience emotion, memories and evaluations triggered by odors, demonstrating the broader impact of her synaesthesia.Additional information
link to conference website -
Speed, L. J., & Majid, A. (2020). Grounding language in the neglected senses of touch, taste, and smell. Cognitive Neuropsychology, 37(5-6), 363-392. doi:10.1080/02643294.2019.1623188.
Abstract
Grounded theories hold sensorimotor activation is critical to language processing. Such theories have focused predominantly on the dominant senses of sight and hearing. Relatively fewer studies have assessed mental simulation within touch, taste, and smell, even though they are critically implicated in communication for important domains, such as health and wellbeing. We review work that sheds light on whether perceptual activation from lesser studied modalities contribute to meaning in language. We critically evaluate data from behavioural, imaging, and cross-cultural studies. We conclude that evidence for sensorimotor simulation in touch, taste, and smell is weak. Comprehending language related to these senses may instead rely on simulation of emotion, as well as crossmodal simulation of the “higher” senses of vision and audition. Overall, the data suggest the need for a refinement of embodiment theories, as not all sensory modalities provide equally strong evidence for mental simulation. -
Speed, L. J., & Majid, A. (2018). Superior olfactory language and cognition in odor-color synaesthesia. Journal of Experimental Psychology: Human Perception and Performance, 44(3), 468-481. doi:10.1037/xhp0000469.
Abstract
Olfaction is often considered a vestigial sense in humans, demoted throughout evolution to make way for the dominant sense of vision. This perspective on olfaction is reflected in how we think and talk about smells in the West, with odor imagery and odor language reported to be difficult. In the present study we demonstrate odor cognition is superior in odor-color synaesthesia, where there are additional sensory connections to odor concepts. Synaesthesia is a neurological phenomenon in which input in 1 modality leads to involuntary perceptual associations. Semantic accounts of synaesthesia posit synaesthetic associations are mediated by activation of inducing concepts. Therefore, synaesthetic associations may strengthen conceptual representations. To test this idea, we ran 6 odor-color synaesthetes and 17 matched controls on a battery of tasks exploring odor and color cognition. We found synaesthetes outperformed controls on tests of both odor and color discrimination, demonstrating for the first time enhanced perception in both the inducer (odor) and concurrent (color) modality. So, not only do synaesthetes have additional perceptual experiences in comparison to controls, their primary perceptual experience is also different. Finally, synaesthetes were more consistent and accurate at naming odors. We propose synaesthetic associations to odors strengthen odor concepts, making them more differentiated (facilitating odor discrimination) and easier to link with lexical representations (facilitating odor naming). In summary, we show for the first time that both odor language and perception is enhanced in people with synaesthetic associations to odors -
Stoehr, A., Benders, T., Van Hell, J. G., & Fikkert, P. (2018). Heritage language exposure impacts voice onset time of Dutch–German simultaneous bilingual preschoolers. Bilingualism: Language and Cognition, 21(3), 598-617. doi:10.1017/S1366728917000116.
Abstract
This study assesses the effects of age and language exposure on VOT production in 29 simultaneous bilingual children aged 3;7 to 5;11 who speak German as a heritage language in the Netherlands. Dutch and German have a binary voicing contrast, but the contrast is implemented with different VOT values in the two languages. The results suggest that bilingual children produce ‘voiced’ plosives similarly in their two languages, and these productions are not monolingual-like in either language. Bidirectional cross-linguistic influence between Dutch and German can explain these results. Yet, the bilinguals seemingly have two autonomous categories for Dutch and German ‘voiceless’ plosives. In German, the bilinguals’ aspiration is not monolingual-like, but bilinguals with more heritage language exposure produce more target-like aspiration. Importantly, the amount of exposure to German has no effect on the majority language's ‘voiceless’ category. This implies that more heritage language exposure is associated with more language-specific voicing systems. -
Stoehr, A. (2018). Speech production, perception, and input of simultaneous bilingual preschoolers: Evidence from voice onset time. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Stolk, A., Griffin, S., Van der Meij, R., Dewar, C., Saez, I., Lin, J. J., Piantoni, G., Schoffelen, J.-M., Knight, R. T., & Oostenveld, R. (2018). Integrated analysis of anatomical and electrophysiological human intracranial data. Nature Protocols, 13, 1699-1723. doi:10.1038/s41596-018-0009-6.
Abstract
Human intracranial electroencephalography (iEEG) recordings provide data with much greater spatiotemporal precision
than is possible from data obtained using scalp EEG, magnetoencephalography (MEG), or functional MRI. Until recently,
the fusion of anatomical data (MRI and computed tomography (CT) images) with electrophysiological data and their
subsequent analysis have required the use of technologically and conceptually challenging combinations of software.
Here, we describe a comprehensive protocol that enables complex raw human iEEG data to be converted into more readily
comprehensible illustrative representations. The protocol uses an open-source toolbox for electrophysiological data
analysis (FieldTrip). This allows iEEG researchers to build on a continuously growing body of scriptable and reproducible
analysis methods that, over the past decade, have been developed and used by a large research community. In this
protocol, we describe how to analyze complex iEEG datasets by providing an intuitive and rapid approach that can handle
both neuroanatomical information and large electrophysiological datasets. We provide a worked example using
an example dataset. We also explain how to automate the protocol and adjust the settings to enable analysis of
iEEG datasets with other characteristics. The protocol can be implemented by a graduate student or postdoctoral
fellow with minimal MATLAB experience and takes approximately an hour to execute, excluding the automated cortical
surface extraction. -
Sulik, J. (2018). Cognitive mechanisms for inferring the meaning of novel signals during symbolisation. PLoS One, 13(1): e0189540. doi:10.1371/journal.pone.0189540.
Abstract
As participants repeatedly interact using graphical signals (as in a game of Pictionary), the signals gradually shift from being iconic (or motivated) to being symbolic (or arbitrary). The aim here is to test experimentally whether this change in the form of the signal implies a concomitant shift in the inferential mechanisms needed to understand it. The results show that, during early, iconic stages, there is more reliance on creative inferential processes associated with insight problem solving, and that the recruitment of these cognitive mechanisms decreases over time. The variation in inferential mechanism is not predicted by the sign’s visual complexity or iconicity, but by its familiarity, and by the complexity of the relevant mental representations. The discussion explores implications for pragmatics, language evolution, and iconicity research.Additional information
Data availability: All data files, tagging instructions, and drawings produced … -
Sumer, B., & Ozyurek, A. (2020). No effects of modality in development of locative expressions of space in signing and speaking children. Journal of Child Language, 47(6), 1101-1131. doi:10.1017/S0305000919000928.
Abstract
Linguistic expressions of locative spatial relations in sign languages are mostly visually- motivated representations of space involving mapping of entities and spatial relations between them onto the hands and the signing space. These are also morphologically complex forms. It is debated whether modality-specific aspects of spatial expressions modulate spatial language development differently in signing compared to speaking children. In a picture description task, we compared the use of locative expressions for containment, support and occlusion relations by deaf children acquiring Turkish Sign Language and hearing children acquiring Turkish (3;5-9;11 years). Unlike previous reports suggesting a boosting effect of iconicity, and / or a hindering effect of morphological complexity of the locative forms in sign languages, our results show similar developmental patterns for signing and speaking children's acquisition of these forms. Our results suggest the primacy of cognitive development guiding the acquisition of locative expressions by speaking and signing children. -
Takashima, A., Konopka, A. E., Meyer, A. S., Hagoort, P., & Weber, K. (2020). Speaking in the brain: The interaction between words and syntax in sentence production. Journal of Cognitive Neuroscience, 32(8), 1466-1483. doi:10.1162/jocn_a_01563.
Abstract
This neuroimaging study investigated the neural infrastructure of sentence-level language production. We compared brain activation patterns, as measured with BOLD-fMRI, during production of sentences that differed in verb argument structures (intransitives, transitives, ditransitives) and the lexical status of the verb (known verbs or pseudoverbs). The experiment consisted of 30 mini-blocks of six sentences each. Each mini-block started with an example for the type of sentence to be produced in that block. On each trial in the mini-blocks, participants were first given the (pseudo-)verb followed by three geometric shapes to serve as verb arguments in the sentences. Production of sentences with known verbs yielded greater activation compared to sentences with pseudoverbs in the core language network of the left inferior frontal gyrus, the left posterior middle temporalgyrus, and a more posterior middle temporal region extending into the angular gyrus, analogous to effects observed in language comprehension. Increasing the number of verb arguments led to greater activation in an overlapping left posterior middle temporal gyrus/angular gyrus area, particularly for known verbs, as well as in the bilateral precuneus. Thus, producing sentences with more complex structures using existing verbs leads to increased activation in the language network, suggesting some reliance on memory retrieval of stored lexical–syntactic information during sentence production. This study thus provides evidence from sentence-level language production in line with functional models of the language network that have so far been mainly based on single-word production, comprehension, and language processing in aphasia. -
Tamariz, M., Roberts, S. G., Martínez, J. I., & Santiago, J. (2018). The Interactive Origin of Iconicity. Cognitive Science, 42, 334-349. doi:10.1111/cogs.12497.
Abstract
We investigate the emergence of iconicity, specifically a bouba-kiki effect in miniature artificial languages under different functional constraints: when the languages are reproduced and when they are used communicatively. We ran transmission chains of (a) participant dyads who played an interactive communicative game and (b) individual participants who played a matched learning game. An analysis of the languages over six generations in an iterated learning experiment revealed that in the Communication condition, but not in the Reproduction condition, words for spiky shapes tend to be rated by naive judges as more spiky than the words for round shapes. This suggests that iconicity may not only be the outcome of innovations introduced by individuals, but, crucially, the result of interlocutor negotiation of new communicative conventions. We interpret our results as an illustration of cultural evolution by random mutation and selection (as opposed to by guided variation).Additional information
Tamariz_et_al-2017-Cognitive_Science.sup-1.pdf -
Tan, Y., & Hagoort, P. (2020). Catecholaminergic modulation of semantic processing in sentence comprehension. Cerebral Cortex, 30(12), 6426-6443. doi:10.1093/cercor/bhaa204.
Abstract
Catecholamine (CA) function has been widely implicated in cognitive functions that are tied to the prefrontal cortex and striatal areas. The present study investigated the effects of methylphenidate, which is a CA agonist, on the electroencephalogram (EEG) response related to semantic processing using a double-blind, placebo-controlled, randomized, crossover, within-subject design. Forty-eight healthy participants read semantically congruent or incongruent sentences after receiving 20-mg methylphenidate or a placebo while their brain activity was monitored with EEG. To probe whether the catecholaminergic modulation is task-dependent, in one condition participants had to focus on comprehending the sentences, while in the other condition, they only had to attend to the font size of the sentence. The results demonstrate that methylphenidate has a task-dependent effect on semantic processing. Compared to placebo, when semantic processing was task-irrelevant, methylphenidate enhanced the detection of semantic incongruence as indexed by a larger N400 amplitude in the incongruent sentences; when semantic processing was task-relevant, methylphenidate induced a larger N400 amplitude in the semantically congruent condition, which was followed by a larger late positive complex effect. These results suggest that CA-related neurotransmitters influence language processing, possibly through the projections between the prefrontal cortex and the striatum, which contain many CA receptors. -
Tan, Y., & Martin, R. C. (2018). Verbal short-term memory capacities and executive function in semantic and syntactic interference resolution during sentence comprehension: Evidence from aphasia. Neuropsychologia, 113, 111-125. doi:10.1016/j.neuropsychologia.2018.03.001.
Abstract
This study examined the role of verbal short-term memory (STM) and executive function (EF) underlying semantic and syntactic interference resolution during sentence comprehension for persons with aphasia (PWA) with varying degrees of STM and EF deficits. Semantic interference was manipulated by varying the semantic plausibility of the intervening NP as subject of the verb and syntactic interference was manipulated by varying whether the NP was another subject or an object. Nine PWA were assessed on sentence reading times and on comprehension question performance. PWA showed exaggerated semantic and syntactic interference effects relative to healthy age-matched control subjects. Importantly, correlational analyses showed that while answering comprehension questions, PWA’ semantic STM capacity related to their ability to resolve semantic but not syntactic interference. In contrast, PWA’ EF abilities related to their ability to resolve syntactic but not semantic interference. Phonological STM deficits were not related to the ability to resolve either type of interference. The results for semantic STM are consistent with prior findings indicating a role for semantic but not phonological STM in sentence comprehension, specifically with regard to maintaining semantic information prior to integration. The results for syntactic interference are consistent with the recent findings suggesting that EF is critical for syntactic processing. -
Teeling, E., Vernes, S. C., Davalos, L. M., Ray, D. A., Gilbert, M. T. P., Myers, E., & Bat1K Consortium (2018). Bat biology, genomes, and the Bat1K project: To generate chromosome-level genomes for all living bat species. Annual Review of Animal Biosciences, 6, 23-46. doi:10.1146/annurev-animal-022516-022811.
Abstract
Bats are unique among mammals, possessing some of the rarest mammalian adaptations, including true self-powered flight, laryngeal echolocation, exceptional longevity, unique immunity, contracted genomes, and vocal learning. They provide key ecosystem services, pollinating tropical plants, dispersing seeds, and controlling insect pest populations, thus driving healthy ecosystems. They account for more than 20% of all living mammalian diversity, and their crown-group evolutionary history dates back to the Eocene. Despite their great numbers and diversity, many species are threatened and endangered. Here we announce Bat1K, an initiative to sequence the genomes of all living bat species (n∼1,300) to chromosome-level assembly. The Bat1K genome consortium unites bat biologists (>132 members as of writing), computational scientists, conservation organizations, genome technologists, and any interested individuals committed to a better understanding of the genetic and evolutionary mechanisms that underlie the unique adaptations of bats. Our aim is to catalog the unique genetic diversity present in all living bats to better understand the molecular basis of their unique adaptations; uncover their evolutionary history; link genotype with phenotype; and ultimately better understand, promote, and conserve bats. Here we review the unique adaptations of bats and highlight how chromosome-level genome assemblies can uncover the molecular basis of these traits. We present a novel sequencing and assembly strategy and review the striking societal and scientific benefits that will result from the Bat1K initiative.Additional information
A full list of Bat1K consortium members is presented in this Supplemental Appen… -
Ten Bosch, L., Ernestus, M., & Boves, L. (2018). Analyzing reaction time sequences from human participants in auditory experiments. In Proceedings of Interspeech 2018 (pp. 971-975). doi:10.21437/Interspeech.2018-1728.
Abstract
Sequences of reaction times (RT) produced by participants in an experiment are not only influenced by the stimuli, but by many other factors as well, including fatigue, attention, experience, IQ, handedness, etc. These confounding factors result in longterm effects (such as a participant’s overall reaction capability) and in short- and medium-time fluctuations in RTs (often referred to as ‘local speed effects’). Because stimuli are usually presented in a random sequence different for each participant, local speed effects affect the underlying ‘true’ RTs of specific trials in different ways across participants. To be able to focus statistical analysis on the effects of the cognitive process under study, it is necessary to reduce the effect of confounding factors as much as possible. In this paper we propose and compare techniques and criteria for doing so, with focus on reducing (‘filtering’) the local speed effects. We show that filtering matters substantially for the significance analyses of predictors in linear mixed effect regression models. The performance of filtering is assessed by the average between-participant correlation between filtered RT sequences and by Akaike’s Information Criterion, an important measure of the goodness-of-fit of linear mixed effect regression models. -
Ten Bosch, L., & Boves, L. (2018). Information encoding by deep neural networks: what can we learn? In Proceedings of Interspeech 2018 (pp. 1457-1461). doi:10.21437/Interspeech.2018-1896.
Abstract
The recent advent of deep learning techniques in speech tech-nology and in particular in automatic speech recognition hasyielded substantial performance improvements. This suggeststhat deep neural networks (DNNs) are able to capture structurein speech data that older methods for acoustic modeling, suchas Gaussian Mixture Models and shallow neural networks failto uncover. In image recognition it is possible to link repre-sentations on the first couple of layers in DNNs to structuralproperties of images, and to representations on early layers inthe visual cortex. This raises the question whether it is possi-ble to accomplish a similar feat with representations on DNNlayers when processing speech input. In this paper we presentthree different experiments in which we attempt to untanglehow DNNs encode speech signals, and to relate these repre-sentations to phonetic knowledge, with the aim to advance con-ventional phonetic concepts and to choose the topology of aDNNs more efficiently. Two experiments investigate represen-tations formed by auto-encoders. A third experiment investi-gates representations on convolutional layers that treat speechspectrograms as if they were images. The results lay the basisfor future experiments with recursive networks. -
Ten Oever, S., Meierdierks, T., Duecker, F., De Graaf, T., & Sack, A. (2020). Phase-coded oscillatory ordering promotes the separation of closely matched representations to optimize perceptual discrimination. iScience, 23(7): 101282. doi:10.1016/j.isci.2020.101282.
Abstract
Low-frequency oscillations are proposed to be involved in separating neuronal representations belonging to different items. Although item-specific neuronal activity was found to cluster on different oscillatory phases, the influence of this mechanism on perception is unknown. Here, we investigated the perceptual consequences of neuronal item separation through oscillatory clustering. In an electroencephalographic experiment, participants categorized sounds parametrically varying in pitch, relative to an arbitrary pitch boundary. Pre-stimulus theta and alpha phase biased near-boundary sound categorization to one category or the other. Phase also modulated whether evoked neuronal responses contributed stronger to the fit of the sound envelope of one or another category. Intriguingly, participants with stronger oscillatory clustering (phase strongly biasing sound categorization) in the theta, but not alpha, range had steeper perceptual psychometric slopes (sharper sound category discrimination). These results indicate that neuronal sorting by phase directly influences subsequent perception and has a positive impact on discrimination performanceAdditional information
Supplemental Information -
Ten Oever, S., De Weerd, P., & Sack, A. T. (2020). Phase-dependent amplification of working memory content and performance. Nature Communications, 11: 1832. doi:10.1038/s41467-020-15629-7.
Abstract
Successful working memory performance has been related to oscillatory mechanisms operating in low-frequency ranges. Yet, their mechanistic interaction with the distributed neural activity patterns representing the content of the memorized information remains unclear. Here, we record EEG during a working memory retention interval, while a task-irrelevant, high-intensity visual impulse stimulus is presented to boost the read-out of distributed neural activity related to the content held in working memory. Decoding of this activity with a linear classifier reveals significant modulations of classification accuracy by oscillatory phase in the theta/alpha ranges at the moment of impulse presentation. Additionally, behavioral accuracy is highest at the phases showing maximized decoding accuracy. At those phases, behavioral accuracy is higher in trials with the impulse compared to no-impulse trials. This constitutes the first evidence in humans that working memory information is maximized within limited phase ranges, and that phase-selective, sensory impulse stimulation can improve working memory. -
Teng, X., Ma, M., Yang, J., Blohm, S., Cai, Q., & Tian, X. (2020). Constrained structure of ancient Chinese poetry facilitates speech content grouping. Current Biology, 30, 1299-1305. doi:10.1016/j.cub.2020.01.059.
Abstract
Ancient Chinese poetry is constituted by structured language that deviates from ordinary language usage [1, 2]; its poetic genres impose unique combinatory constraints on linguistic elements [3]. How does the constrained poetic structure facilitate speech segmentation when common linguistic [4, 5, 6, 7, 8] and statistical cues [5, 9] are unreliable to listeners in poems? We generated artificial Jueju, which arguably has the most constrained structure in ancient Chinese poetry, and presented each poem twice as an isochronous sequence of syllables to native Mandarin speakers while conducting magnetoencephalography (MEG) recording. We found that listeners deployed their prior knowledge of Jueju to build the line structure and to establish the conceptual flow of Jueju. Unprecedentedly, we found a phase precession phenomenon indicating predictive processes of speech segmentation—the neural phase advanced faster after listeners acquired knowledge of incoming speech. The statistical co-occurrence of monosyllabic words in Jueju negatively correlated with speech segmentation, which provides an alternative perspective on how statistical cues facilitate speech segmentation. Our findings suggest that constrained poetic structures serve as a temporal map for listeners to group speech contents and to predict incoming speech signals. Listeners can parse speech streams by using not only grammatical and statistical cues but also their prior knowledge of the form of language.Additional information
Supplemental Information -
Ter Bekke, M., Drijvers, L., & Holler, J. (2020). The predictive potential of hand gestures during conversation: An investigation of the timing of gestures in relation to speech. In Proceedings of the 7th GESPIN - Gesture and Speech in Interaction Conference. Stockholm: KTH Royal Institute of Technology.
Abstract
In face-to-face conversation, recipients might use the bodily movements of the speaker (e.g. gestures) to facilitate language processing. It has been suggested that one way through which this facilitation may happen is prediction. However, for this to be possible, gestures would need to precede speech, and it is unclear whether this is true during natural conversation.
In a corpus of Dutch conversations, we annotated hand gestures that represent semantic information and occurred during questions, and the word(s) which corresponded most closely to the gesturally depicted meaning. Thus, we tested whether representational gestures temporally precede their lexical affiliates. Further, to see whether preceding gestures may indeed facilitate language processing, we asked whether the gesture-speech asynchrony predicts the response time to the question the gesture is part of.
Gestures and their strokes (most meaningful movement component) indeed preceded the corresponding lexical information, thus demonstrating their predictive potential. However, while questions with gestures got faster responses than questions without, there was no evidence that questions with larger gesture-speech asynchronies get faster responses. These results suggest that gestures indeed have the potential to facilitate predictive language processing, but further analyses on larger datasets are needed to test for links between asynchrony and processing advantages. -
Ter Hark, S. E., Jamain, S., Schijven, D., Lin, B. D., Bakker, M. K., Boland-Auge, A., Deleuze, J.-F., Troudet, R., Malhotra, A. K., Gülöksüz, S., Vinkers, C. H., Ebdrup, B. H., Kahn, R. S., Leboyer, M., & Luykx, J. J. (2020). A new genetic locus for antipsychotic-induced weight gain: A genome-wide study of first-episode psychosis patients using amisulpride (from the OPTiMiSE cohort). Journal of Psychopharmacology, 34(5), 524-531. doi:10.1177/0269881120907972.
Abstract
Background:Antipsychotic-induced weight gain is a common and debilitating side effect of antipsychotics. Although genome-wide association studies of antipsychotic-induced weight gain have been performed, few genome-wide loci have been discovered. Moreover, these genome-wide association studies have included a wide variety of antipsychotic compounds.Aims:We aim to gain more insight in the genomic loci affecting antipsychotic-induced weight gain. Given the variable pharmacological properties of antipsychotics, we hypothesized that targeting a single antipsychotic compound would provide new clues about genomic loci affecting antipsychotic-induced weight gain.Methods:All subjects included for this genome-wide association study (n=339) were first-episode schizophrenia spectrum disorder patients treated with amisulpride and were minimally medicated (defined as antipsychotic use <2?weeks in the previous year and/or <6?weeks lifetime). Weight gain was defined as the increase in body mass index from before until approximately 1 month after amisulpride treatment.Results:Our genome-wide association analyses for antipsychotic-induced weight gain yielded one genome-wide significant hit (rs78310016; ?=1.05; p=3.66 ? 10?08; n=206) in a locus not previously associated with antipsychotic-induced weight gain or body mass index. Minor allele carriers had an odds ratio of 3.98 (p=1.0 ? 10?03) for clinically meaningful antipsychotic-induced weight gain (?7% of baseline weight). In silico analysis elucidated a chromatin interaction with 3-Hydroxy-3-Methylglutaryl-CoA Synthase 1. In an attempt to replicate single-nucleotide polymorphisms previously associated with antipsychotic-induced weight gain, we found none were associated with amisulpride-induced weight gain.Conclusion:Our findings suggest the involvement of rs78310016 and possibly 3-Hydroxy-3-Methylglutaryl-CoA Synthase 1 in antipsychotic-induced weight gain. In line with the unique binding profile of this atypical antipsychotic, our findings furthermore hint that biological mechanisms underlying amisulpride-induced weight gain differ from antipsychotic-induced weight gain by other atypical antipsychotics.Additional information
Supplementary_Figures_and_Tables_Optimise_GWAS.pdf -
Terband, H., Rodd, J., & Maas, E. (2020). Testing hypotheses about the underlying deficit of Apraxia of Speech (AOS) through computational neural modelling with the DIVA model. International Journal of Speech-Language Pathology, 22(4), 475-486. doi:10.1080/17549507.2019.1669711.
Abstract
Purpose: A recent behavioural experiment featuring a noise masking paradigm suggests that Apraxia of Speech (AOS) reflects a disruption of feedforward control, whereas feedback control is spared and plays a more prominent role in achieving and maintaining segmental contrasts. The present study set out to validate the interpretation of AOS as a possible feedforward impairment using computational neural modelling with the DIVA (Directions Into Velocities of Articulators) model.
Method: In a series of computational simulations with the DIVA model featuring a noise-masking paradigm mimicking the behavioural experiment, we investigated the effect of a feedforward, feedback, feedforward + feedback, and an upper motor neuron dysarthria impairment on average vowel spacing and dispersion in the production of six/bVt/speech targets.
Result: The simulation results indicate that the output of the model with the simulated feedforward deficit resembled the group findings for the human speakers with AOS best.
Conclusion: These results provide support to the interpretation of the human observations, corroborating the notion that AOS can be conceptualised as a deficit in feedforward control. -
Terporten, R. (2020). The power of context: How linguistic contextual information shapes brain dynamics during sentence processing. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Thompson, B., Raviv, L., & Kirby, S. (2020). Complexity can be maintained in small populations: A model of lexical variability in emerging sign languages. In A. Ravignani, C. Barbieri, M. Flaherty, Y. Jadoul, E. Lattenkamp, H. Little, M. Martins, K. Mudd, & T. Verhoef (
Eds. ), The Evolution of Language: Proceedings of the 13th International Conference (Evolang13) (pp. 440-442). Nijmegen: The Evolution of Language Conferences. -
Thompson, B., & Lupyan, G. (2018). Automatic estimation of lexical concreteness in 77 languages. In C. Kalish, M. Rau, J. Zhu, & T. T. Rogers (
Eds. ), Proceedings of the 40th Annual Conference of the Cognitive Science Society (CogSci 2018) (pp. 1122-1127). Austin, TX: Cognitive Science Society.Abstract
We estimate lexical Concreteness for millions of words across 77 languages. Using a simple regression framework, we combine vector-based models of lexical semantics with experimental norms of Concreteness in English and Dutch. By applying techniques to align vector-based semantics across distinct languages, we compute and release Concreteness estimates at scale in numerous languages for which experimental norms are not currently available. This paper lays out the technique and its efficacy. Although this is a difficult dataset to evaluate immediately, Concreteness estimates computed from English correlate with Dutch experimental norms at $\rho$ = .75 in the vocabulary at large, increasing to $\rho$ = .8 among Nouns. Our predictions also recapitulate attested relationships with word frequency. The approach we describe can be readily applied to numerous lexical measures beyond Concreteness -
Thompson, P. M., Jahanshad, N., Ching, C. R. K., Salminen, L. E., Thomopoulos, S. I., Bright, J., Baune, B. T., Bertolín, S., Bralten, J., Bruin, W. B., Bülow, R., Chen, J., Chye, Y., Dannlowski, U., De Kovel, C. G. F., Donohoe, G., Eyler, L. T., Faraone, S. V., Favre, P., Filippi, C. A. and 151 moreThompson, P. M., Jahanshad, N., Ching, C. R. K., Salminen, L. E., Thomopoulos, S. I., Bright, J., Baune, B. T., Bertolín, S., Bralten, J., Bruin, W. B., Bülow, R., Chen, J., Chye, Y., Dannlowski, U., De Kovel, C. G. F., Donohoe, G., Eyler, L. T., Faraone, S. V., Favre, P., Filippi, C. A., Frodl, T., Garijo, D., Gil, Y., Grabe, H. J., Grasby, K. L., Hajek, T., Han, L. K. M., Hatton, S. N., Hilbert, K., Ho, T. C., Holleran, L., Homuth, G., Hosten, N., Houenou, J., Ivanov, I., Jia, T., Kelly, S., Klein, M., Kwon, J. S., Laansma, M. A., Leerssen, J., Lueken, U., Nunes, A., O'Neill, J., Opel, N., Piras, F., Piras, F., Postema, M., Pozzi, E., Shatokhina, N., Soriano-Mas, C., Spalletta, G., Sun, D., Teumer, A., Tilot, A. K., Tozzi, L., Van der Merwe, C., Van Someren, E. J. W., Van Wingen, G. A., Völzke, H., Walton, E., Wang, L., Winkler, A. M., Wittfeld, K., Wright, M. J., Yun, J.-Y., Zhang, G., Zhang-James, Y., Adhikari, B. M., Agartz, I., Aghajani, M., Aleman, A., Althoff, R. R., Altmann, A., Andreassen, O. A., Baron, D. A., Bartnik-Olson, B. L., Bas-Hoogendam, J. M., Baskin-Sommers, A. R., Bearden, C. E., Berner, L. A., Boedhoe, P. S. W., Brouwer, R. M., Buitelaar, J. K., Caeyenberghs, K., Cecil, C. A. M., Cohen, R. A., Cole, J. H., Conrod, P. J., De Brito, S. A., De Zwarte, S. M. C., Dennis, E. L., Desrivieres, S., Dima, D., Ehrlich, S., Esopenko, C., Fairchild, G., Fisher, S. E., Fouche, J.-P., Francks, C., Frangou, S., Franke, B., Garavan, H. P., Glahn, D. C., Groenewold, N. A., Gurholt, T. P., Gutman, B. A., Hahn, T., Harding, I. H., Hernaus, D., Hibar, D. P., Hillary, F. G., Hoogman, M., Hulshoff Pol, H. E., Jalbrzikowski, M., Karkashadze, G. A., Klapwijk, E. T., Knickmeyer, R. C., Kochunov, P., Koerte, I. K., Kong, X., Liew, S.-L., Lin, A. P., Logue, M. W., Luders, E., Macciardi, F., Mackey, S., Mayer, A. R., McDonald, C. R., McMahon, A. B., Medland, S. E., Modinos, G., Morey, R. A., Mueller, S. C., Mukherjee, P., Namazova-Baranova, L., Nir, T. M., Olsen, A., Paschou, P., Pine, D. S., Pizzagalli, F., Rentería, M. E., Rohrer, J. D., Sämann, P. G., Schmaal, L., Schumann, G., Shiroishi, M. S., Sisodiya, S. M., Smit, D. J. A., Sønderby, I. E., Stein, D. J., Stein, J. L., Tahmasian, M., Tate, D. F., Turner, J. A., Van den Heuvel, O. A., Van der Wee, N. J. A., Van der Werf, Y. D., Van Erp, T. G. M., Van Haren, N. E. M., Van Rooij, D., Van Velzen, L. S., Veer, I. M., Veltman, D. J., Villalon-Reina, J. E., Walter, H., Whelan, C. D., Wilde, E. A., Zarei, M., Zelman, V., & Enigma Consortium (2020). ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries. Translational Psychiatry, 10(1): 100. doi:10.1038/s41398-020-0705-1.
Abstract
This review summarizes the last decade of work by the ENIGMA (Enhancing NeuroImaging Genetics through Meta Analysis) Consortium, a global alliance of over 1400 scientists across 43 countries, studying the human brain in health and disease. Building on large-scale genetic studies that discovered the first robustly replicated genetic loci associated with brain metrics, ENIGMA has diversified into over 50 working groups (WGs), pooling worldwide data and expertise to answer fundamental questions in neuroscience, psychiatry, neurology, and genetics. Most ENIGMA WGs focus on specific psychiatric and neurological conditions, other WGs study normal variation due to sex and gender differences, or development and aging; still other WGs develop methodological pipelines and tools to facilitate harmonized analyses of “big data” (i.e., genetic and epigenetic data, multimodal MRI, and electroencephalography data). These international efforts have yielded the largest neuroimaging studies to date in schizophrenia, bipolar disorder, major depressive disorder, post-traumatic stress disorder, substance use disorders, obsessive-compulsive disorder, attention-deficit/hyperactivity disorder, autism spectrum disorders, epilepsy, and 22q11.2 deletion syndrome. More recent ENIGMA WGs have formed to study anxiety disorders, suicidal thoughts and behavior, sleep and insomnia, eating disorders, irritability, brain injury, antisocial personality and conduct disorder, and dissociative identity disorder. Here, we summarize the first decade of ENIGMA’s activities and ongoing projects, and describe the successes and challenges encountered along the way. We highlight the advantages of collaborative large-scale coordinated data analyses for testing reproducibility and robustness of findings, offering the opportunity to identify brain systems involved in clinical syndromes across diverse samples and associated genetic, environmental, demographic, cognitive, and psychosocial factors.Additional information
41398_2020_705_MOESM1_ESM.pdf -
Thompson, P. A., Bishop, D. V. M., Eising, E., Fisher, S. E., & Newbury, D. F. (2020). Generalized Structured Component Analysis in candidate gene association studies: Applications and limitations [version 2; peer review: 3 approved]. Wellcome Open Research, 4: 142. doi:10.12688/wellcomeopenres.15396.2.
Abstract
Background: Generalized Structured Component Analysis (GSCA) is a component-based alternative to traditional covariance-based structural equation modelling. This method has previously been applied to test for association between candidate genes and clinical phenotypes, contrasting with traditional genetic association analyses that adopt univariate testing of many individual single nucleotide polymorphisms (SNPs) with correction for multiple testing.
Methods: We first evaluate the ability of the GSCA method to replicate two previous findings from a genetics association study of developmental language disorders. We then present the results of a simulation study to test the validity of the GSCA method under more restrictive data conditions, using smaller sample sizes and larger numbers of SNPs than have previously been investigated. Finally, we compare GSCA performance against univariate association analysis conducted using PLINK v1.9.
Results: Results from simulations show that power to detect effects depends not just on sample size, but also on the ratio of SNPs with effect to number of SNPs tested within a gene. Inclusion of many SNPs in a model dilutes true effects.
Conclusions: We propose that GSCA is a useful method for replication studies, when candidate SNPs have been identified, but should not be used for exploratory analysis.Additional information
data via OSF -
Thompson, B., Roberts, S., & Lupyan, G. (2018). Quantifying semantic similarity across languages. In C. Kalish, M. Rau, J. Zhu, & T. T. Rogers (
Eds. ), Proceedings of the 40th Annual Conference of the Cognitive Science Society (CogSci 2018) (pp. 2551-2556). Austin, TX: Cognitive Science Society.Abstract
Do all languages convey semantic knowledge in the same way? If language simply mirrors the structure of the world, the answer should be a qualified “yes”. If, however, languages impose structure as much as reflecting it, then even ostensibly the “same” word in different languages may mean quite different things. We provide a first pass at a large-scale quantification of cross-linguistic semantic alignment of approximately 1000 meanings in 55 languages. We find that the translation equivalents in some domains (e.g., Time, Quantity, and Kinship) exhibit high alignment across languages while the structure of other domains (e.g., Politics, Food, Emotions, and Animals) exhibits substantial cross-linguistic variability. Our measure of semantic alignment correlates with known phylogenetic distances between languages: more phylogenetically distant languages have less semantic alignment. We also find semantic alignment to correlate with cultural distances between societies speaking the languages, suggesting a rich co-adaptation of language and culture even in domains of experience that appear most constrained by the natural world -
Thorin, J. (2020). Can you hear what you cannot say? The interactions of speech perception and production during non-native phoneme learning. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Thorin, J., Sadakata, M., Desain, P., & McQueen, J. M. (2018). Perception and production in interaction during non-native speech category learning. The Journal of the Acoustical Society of America, 144(1), 92-103. doi:10.1121/1.5044415.
Abstract
Establishing non-native phoneme categories can be a notoriously difficult endeavour—in both speech perception and speech production. This study asks how these two domains interact in the course of this learning process. It investigates the effect of perceptual learning and related production practice of a challenging non-native category on the perception and/or production of that category. A four-day perceptual training protocol on the British English /æ/-/ɛ/ vowel contrast was combined with either related or unrelated production practice. After feedback on perceptual categorisation of the contrast, native Dutch participants in the related production group (N = 19) pronounced the trial's correct answer, while participants in the unrelated production group (N = 19) pronounced similar but phonologically unrelated words. Comparison of pre- and post-tests showed significant improvement over the course of training in both perception and production, but no differences between the groups were found. The lack of an effect of production practice is discussed in the light of previous, competing results and models of second-language speech perception and production. This study confirms that, even in the context of related production practice, perceptual training boosts production learning. -
Tian, X., Ding, N., Teng, X., Bai, F., & Poeppel, D. (2018). Imagined speech influences perceived loudness of sound. Nature Human Behaviour, 2, 225-234. doi:10.1038/s41562-018-0305-8.
Abstract
The way top-down and bottom-up processes interact to shape our perception and behaviour is a fundamental question and remains highly controversial. How early in a processing stream do such interactions occur, and what factors govern such interactions? The degree of abstractness of a perceptual attribute (for example, orientation versus shape in vision, or loudness versus sound identity in hearing) may determine the locus of neural processing and interaction between bottom-up and internal information. Using an imagery-perception repetition paradigm, we find that imagined speech affects subsequent auditory perception, even for a low-level attribute such as loudness. This effect is observed in early auditory responses in magnetoencephalography and electroencephalography that correlate with behavioural loudness ratings. The results suggest that the internal reconstruction of neural representations without external stimulation is flexibly regulated by task demands, and that such top-down processes can interact with bottom-up information at an early perceptual stage to modulate perception. -
Tilot, A. K., Kucera, K. S., Vino, A., Asher, J. E., Baron-Cohen, S., & Fisher, S. E. (2018). Rare variants in axonogenesis genes connect three families with sound–color synesthesia. Proceedings of the National Academy of Sciences of the United States of America, 115(12), 3168-3173. doi:10.1073/pnas.1715492115.
Abstract
Synesthesia is a rare nonpathological phenomenon where stimulation of one sense automatically provokes a secondary perception in another. Hypothesized to result from differences in cortical wiring during development, synesthetes show atypical structural and functional neural connectivity, but the underlying molecular mechanisms are unknown. The trait also appears to be more common among people with autism spectrum disorder and savant abilities. Previous linkage studies searching for shared loci of large effect size across multiple families have had limited success. To address the critical lack of candidate genes, we applied whole-exome sequencing to three families with sound–color (auditory–visual) synesthesia affecting multiple relatives across three or more generations. We identified rare genetic variants that fully cosegregate with synesthesia in each family, uncovering 37 genes of interest. Consistent with reports indicating genetic heterogeneity, no variants were shared across families. Gene ontology analyses highlighted six genes—COL4A1, ITGA2, MYO10, ROBO3, SLC9A6, and SLIT2—associated with axonogenesis and expressed during early childhood when synesthetic associations are formed. These results are consistent with neuroimaging-based hypotheses about the role of hyperconnectivity in the etiology of synesthesia and offer a potential entry point into the neurobiology that organizes our sensory experiences.Additional information
Tilot_etal_2018SI.pdf -
Todorova, L., & Neville, D. A. (2020). Associative and identity words promote the speed of visual categorization: A hierarchical drift diffusion account. Frontiers in Psychology, 11: 955. doi:10.3389/fpsyg.2020.00955.
Abstract
Words can either boost or hinder the processing of visual information, which can lead to facilitation or interference of the behavioral response. We investigated the stage (response execution or target processing) of verbal interference/facilitation in the response priming paradigm with a gender categorization task. Participants in our study were asked to judge whether the presented stimulus was a female or male face that was briefly preceded by a gender word either congruent (prime: “man,” target: “man”), incongruent (prime: “woman,” target: “man”) or neutral (prime: “day,” target: “man”) with respect to the face stimulus. We investigated whether related word-picture pairs resulted in faster reaction times in comparison to the neutral word-picture pairs (facilitation) and whether unrelated word-picture pairs resulted in slower reaction times in comparison to neutral word-picture pairs (interference). We further examined whether these effects (if any) map onto response conflict or aspects of target processing. In addition, identity (“man,” “woman”) and associative (“tie,” “dress”) primes were introduced to investigate the cognitive mechanisms of semantic and Stroop-like effects in response priming (introduced respectively by associations and identity words). We analyzed responses and reaction times using the drift diffusion model to examine the effect of facilitation and/or interference as a function of the prime type. We found that regardless of prime type words introduce a facilitatory effect, which maps to the processes of visual attention and response execution. -
Todorova, L., Neville, D. A., & Piai, V. (2020). Lexical-semantic and executive deficits revealed by computational modelling: A drift diffusion model perspective. Neuropsychologia, 146: 107560. doi:10.1016/j.neuropsychologia.2020.107560.
Abstract
Flexible language use requires coordinated functioning of two systems: conceptual representations and control. The interaction between the two systems can be observed when people are asked to match a word to a picture. Participants are slower and less accurate for related word-picture pairs (word: banana, picture: apple) relative to unrelated pairs (word: banjo, picture: apple). The mechanism underlying interference however is still unclear. We analyzed word-picture matching (WPM) performance of patients with stroke-induced lesions to the left-temporal (N = 5) or left-frontal cortex (N = 5) and matched controls (N = 12) using the drift diffusion model (DDM). In DDM, the process of making a decision is described as the stochastic accumulation of evidence towards a response. The parameters of the DDM model that characterize this process are decision threshold, drift rate, starting point and non-decision time, each of which bears cognitive interpretability. We compared the estimated model parameters from controls and patients to investigate the mechanisms of WPM interference. WPM performance in controls was explained by the amount of information needed to make a decision (decision threshold): a higher threshold was associated with related word-picture pairs relative to unrelated ones. No difference was found in the quality of the evidence (drift rate). This suggests an executive rather than semantic mechanism underlying WPM interference. Both patients with temporal and frontal lesions exhibited both increased drift rate and decision threshold for unrelated pairs relative to related ones. Left-frontal and temporal damage affected the computations required by WPM similarly, resulting in systematic deficits across lexical-semantic memory and executive functions. These results support a diverse but interactive role of lexical-semantic memory and semantic control mechanisms.Additional information
supplementary material -
Torreira, F., & Grice, M. (2018). Melodic constructions in Spanish: Metrical structure determines the association properties of intonational tones. Journal of the International Phonetic Association, 48(1), 9-32. doi:10.1017/S0025100317000603.
Abstract
This paper explores phrase-length-related alternations in the association of tones to positions in metrical structure in two melodic constructions of Spanish. An imitation-and-completion task eliciting (a) the low–falling–rising contour and (b) the circumflex contour on intonation phrases (IPs) of one, two, and three prosodic words revealed that, although the focus structure and pragmatic context is constant across conditions, phrases containing one prosodic word differ in their nuclear (i.e. final) pitch accents and edge tones from phrases containing more than one prosodic word. For contour (a), short intonation phrases (e.g. [ Ma no lo ] IP ) were produced with a low accent followed by a high edge tone (L ∗ H% in ToBI notation), whereas longer phrases (e.g. [ El her ma no de la a m igadeMa no lo ] IP ‘Manolo’s friend’s brother’) had a low accent on the first stressed syllable, a rising accent on the last stressed syllable, and a low edge tone (L ∗ L+H ∗ L%). For contour (b), short phrases were produced with a high–rise (L+H ∗ ¡H%), whereas longer phrases were produced with an initial accentual rise followed by an upstepped rise–fall (L+H ∗ ¡H ∗ L%). These findings imply that the common practice of describing the structure of intonation contours as consisting of a constant nuclear pitch accent and following edge tone is not adequate for modeling Spanish intonation. To capture the observed melodic alternations, we argue for clearer separation between tones and metrical structure, whereby intonational tones do not necessarily have an intrinsic culminative or delimitative function (i.e. as pitch accents or as edge tones). Instead, this function results from melody-specific principles of tonal–metrical association. -
Tourtouri, E. N. (2020). Rational redundancy in situated communication. PhD Thesis, Saarland University, Saarbrücken.
Abstract
Contrary to the Gricean maxims of Quantity (Grice, 1975), it has been repeatedly shown that speakers often include redundant information in their utterances (over- specifications). Previous research on referential communication has long debated whether this redundancy is the result of speaker-internal or addressee-oriented processes, while it is also unclear whether referential redundancy hinders or facilitates comprehension. We present a bounded-rational account of referential redundancy, according to which any word in an utterance, even if it is redundant, can be beneficial to comprehension, to the extent that it facilitates the reduction of listeners’ uncertainty regarding the target referent in a co-present visual scene. Information-theoretic metrics, such as Shannon’s entropy (Shannon, 1948), were employed in order to quantify this uncertainty in bits of information, and gain an estimate of the cognitive effort related to referential processing. Under this account, speakers may, therefore, utilise redundant adjectives in order to reduce the visually-determined entropy (and thereby their listeners’ cognitive effort) more uniformly across their utterances. In a series of experiments, we examined both the comprehension and the production of over-specifications in complex visual contexts. Our findings are in line with the bounded-rational account. Specifically, we present evidence that: (a) in view of complex visual scenes, listeners’ processing and identification of the target referent may be facilitated by the use of redundant adjectives, as well as by a more uniform reduction of uncertainty across the utterance, and (b) that, while both speaker-internal and addressee-oriented processes are at play in the production of over-specifications, listeners’ processing concerns may also influence the encoding of redundant adjectives, at least for some speakers, who encode redundant adjectives more frequently when these adjectives contribute to a more uniform reduction of referential entropy. -
Tourtouri, E. N., Delogu, F., & Crocker, M. W. (2018). Specificity and entropy reduction in situated referential processing. In G. Gunzelmann, A. Howes, T. Tenbrink, & E. Davelaar (
Eds. ), Proceedings of the 39th Annual Conference of the Cognitive Science Society (CogSci 2017) (pp. 3356-3361). Austin: Cognitive Science Society.Abstract
In situated communication, reference to an entity in the shared visual context can be established using eitheranexpression that conveys precise (minimally specified) or redundant (over-specified) information. There is, however, along-lasting debate in psycholinguistics concerningwhether the latter hinders referential processing. We present evidence from an eyetrackingexperiment recordingfixations as well asthe Index of Cognitive Activity –a novel measure of cognitive workload –supporting the view that over-specifications facilitate processing. We further present originalevidence that, above and beyond the effect of specificity,referring expressions thatuniformly reduce referential entropyalso benefitprocessing -
Tribushinina, E., Mak, M., Dubinkina, E., & Mak, W. M. (2018). Adjective production by Russian-speaking children with developmental language disorder and Dutch–Russian simultaneous bilinguals: Disentangling the profiles. Applied Psycholinguistics, 39(5), 1033-1064. doi:10.1017/S0142716418000115.
Abstract
Bilingual children with reduced exposure to one or both languages may have language profiles that are
apparently similar to those of children with developmental language disorder (DLD). Children with
DLD receive enough input, but have difficulty using this input for acquisition due to processing deficits.
The present investigation aims to determine aspects of adjective production that are differentially
affected by reduced input (in bilingualism) and reduced intake (in DLD). Adjectives were elicited
from Dutch–Russian simultaneous bilinguals with limited exposure to Russian and Russian-speaking
monolinguals with andwithout DLD.Anantonymelicitation taskwas used to assess the size of adjective
vocabularies, and a degree task was employed to compare the preferences of the three groups in the
use of morphological, lexical, and syntactic degree markers. The results revealed that adjective–noun
agreement is affected to the same extent by both reduced input and reduced intake. The size of adjective
lexicons is also negatively affected by both, but more so by reduced exposure. However, production
of morphological degree markers and learning of semantic paradigms are areas of relative strength in
which bilinguals outperform monolingual children with DLD.We suggest that reduced input might be
counterbalanced by linguistic and cognitive advantages of bilingualism -
Tromp, J. (2018). Indirect request comprehension in different contexts. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Tromp, J., Peeters, D., Meyer, A. S., & Hagoort, P. (2018). The combined use of Virtual Reality and EEG to study language processing in naturalistic environments. Behavior Research Methods, 50(2), 862-869. doi:10.3758/s13428-017-0911-9.
Abstract
When we comprehend language, we often do this in rich settings in which we can use many cues to understand what someone is saying. However, it has traditionally been difficult to design experiments with rich three-dimensional contexts that resemble our everyday environments, while maintaining control over the linguistic and non-linguistic information that is available. Here we test the validity of combining electroencephalography (EEG) and Virtual Reality (VR) to overcome this problem. We recorded electrophysiological brain activity during language processing in a well-controlled three-dimensional virtual audiovisual environment. Participants were immersed in a virtual restaurant, while wearing EEG equipment. In the restaurant participants encountered virtual restaurant guests. Each guest was seated at a separate table with an object on it (e.g. a plate with salmon). The restaurant guest would then produce a sentence (e.g. “I just ordered this salmon.”). The noun in the spoken sentence could either match (“salmon”) or mismatch (“pasta”) with the object on the table, creating a situation in which the auditory information was either appropriate or inappropriate in the visual context. We observed a reliable N400 effect as a consequence of the mismatch. This finding validates the combined use of VR and EEG as a tool to study the neurophysiological mechanisms of everyday language comprehension in rich, ecologically valid settings. -
Trompenaars, T. (2018). Empathy for the inanimate. Linguistics in the Netherlands, 35, 125-138. doi:10.1075/avt.00009.tro.
Abstract
Narrative fiction may invite us to share the perspective of characters which are very much unlike ourselves. Inanimate objects featuring as protagonists or narrators are an extreme example of this. The way readers experience these characters was examined by means of a narrative immersion study. Participants (N = 200) judged narratives containing animate or inanimate characters in predominantly Agent or Experiencer roles. Narratives with inanimate characters were judged to be less emotionally engaging. This effect was influenced by the dominant thematic role associated with the character: inanimate Agents led to more defamiliarization compared to their animate counterparts than inanimate Experiencers. I argue for an integrated account of thematic roles and animacy in literary experience and linguistics in general. -
Trompenaars, T., Hogeweg, L., Stoop, W., & De Hoop, H. (2018). The language of an inanimate narrator. Open Linguistics, 4, 707-721. doi:10.1515/opli-2018-0034.
Abstract
We show by means of a corpus study that the language used by the inanimate first person narrator in the novel Specht en zoon deviates from what we would expect on the basis of the fact that the narrator is inanimate, but at the same time also differsfrom the language of a human narrator in the novel De wijde blik on several linguistic dimensions. Whereas the human narrator is associated strongly with action verbs, preferring the Agent role, the inanimate narrator is much more limited to the Experiencer role, predominantly associated with cognition and sensory verbs. Our results show that animacy as a linguistic concept may be refined by taking into account the myriad ways in which an entity’s conceptual animacy may be expressed: we accept the conceptual animacy of the inanimate narrator despite its inability to act on its environment, showing this need not be a requirement for animacy -
Trujillo, J. P., Simanova, I., Bekkering, H., & Ozyurek, A. (2018). Communicative intent modulates production and perception of actions and gestures: A Kinect study. Cognition, 180, 38-51. doi:10.1016/j.cognition.2018.04.003.
Abstract
Actions may be used to directly act on the world around us, or as a means of communication. Effective communication requires the addressee to recognize the act as being communicative. Humans are sensitive to ostensive communicative cues, such as direct eye gaze (Csibra & Gergely, 2009). However, there may be additional cues present in the action or gesture itself. Here we investigate features that characterize the initiation of a communicative interaction in both production and comprehension.
We asked 40 participants to perform 31 pairs of object-directed actions and representational gestures in more- or less- communicative contexts. Data were collected using motion capture technology for kinematics and video recording for eye-gaze. With these data, we focused on two issues. First, if and how actions and gestures are systematically modulated when performed in a communicative context. Second, if observers exploit such kinematic information to classify an act as communicative.
Our study showed that during production the communicative context modulates space–time dimensions of kinematics and elicits an increase in addressee-directed eye-gaze. Naïve participants detected communicative intent in actions and gestures preferentially using eye-gaze information, only utilizing kinematic information when eye-gaze was unavailable.
Our study highlights the general communicative modulation of action and gesture kinematics during production but also shows that addressees only exploit this modulation to recognize communicative intention in the absence of eye-gaze. We discuss these findings in terms of distinctive but potentially overlapping functions of addressee directed eye-gaze and kinematic modulations within the wider context of human communication and learning. -
Trujillo, J. P. (2020). Movement speaks for itself: The kinematic and neural dynamics of communicative action and gesture. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Trujillo, J. P., Simanova, I., Bekkering, H., & Ozyurek, A. (2020). The communicative advantage: How kinematic signaling supports semantic comprehension. Psychological Research, 84, 1897-1911. doi:10.1007/s00426-019-01198-y.
Abstract
Humans are unique in their ability to communicate information through representational gestures which visually simulate an action (eg. moving hands as if opening a jar). Previous research indicates that the intention to communicate modulates the kinematics (e.g., velocity, size) of such gestures. If and how this modulation influences addressees’ comprehension of gestures have not been investigated. Here we ask whether communicative kinematic modulation enhances semantic comprehension (i.e., identification) of gestures. We additionally investigate whether any comprehension advantage is due to enhanced early identification or late identification. Participants (n = 20) watched videos of representational gestures produced in a more- (n = 60) or less-communicative (n = 60) context and performed a forced-choice recognition task. We tested the isolated role of kinematics by removing visibility of actor’s faces in Experiment I, and by reducing the stimuli to stick-light figures in Experiment II. Three video lengths were used to disentangle early identification from late identification. Accuracy and response time quantified main effects. Kinematic modulation was tested for correlations with task performance. We found higher gesture identification performance in more- compared to less-communicative gestures. However, early identification was only enhanced within a full visual context, while late identification occurred even when viewing isolated kinematics. Additionally, temporally segmented acts with more post-stroke holds were associated with higher accuracy. Our results demonstrate that communicative signaling, interacting with other visual cues, generally supports gesture identification, while kinematic modulation specifically enhances late identification in the absence of other cues. Results provide insights into mutual understanding processes as well as creating artificial communicative agents.Additional information
Supplementary material -
Trujillo, J. P., Simanova, I., Ozyurek, A., & Bekkering, H. (2020). Seeing the unexpected: How brains read communicative intent through kinematics. Cerebral Cortex, 30(3), 1056-1067. doi:10.1093/cercor/bhz148.
Abstract
Social interaction requires us to recognize subtle cues in behavior, such as kinematic differences in actions and gestures produced with different social intentions. Neuroscientific studies indicate that the putative mirror neuron system (pMNS) in the premotor cortex and mentalizing system (MS) in the medial prefrontal cortex support inferences about contextually unusual actions. However, little is known regarding the brain dynamics of these systems when viewing communicatively exaggerated kinematics. In an event-related functional magnetic resonance imaging experiment, 28 participants viewed stick-light videos of pantomime gestures, recorded in a previous study, which contained varying degrees of communicative exaggeration. Participants made either social or nonsocial classifications of the videos. Using participant responses and pantomime kinematics, we modeled the probability of each video being classified as communicative. Interregion connectivity and activity were modulated by kinematic exaggeration, depending on the task. In the Social Task, communicativeness of the gesture increased activation of several pMNS and MS regions and modulated top-down coupling from the MS to the pMNS, but engagement of the pMNS and MS was not found in the nonsocial task. Our results suggest that expectation violations can be a key cue for inferring communicative intention, extending previous findings from wholly unexpected actions to more subtle social signaling. -
Tsoukala, C., Frank, S. L., Van den Bosch, A., Kroff, J. V., & Broersma, M. (2020). Simulating Spanish-English code-switching: El modelo está generating code-switches. In E. Chersoni, C. Jacobs, Y. Oseki, L. Prévot, & E. Santus (
Eds. ), Proceedings of the Workshop on Cognitive Modeling and Computational Linguistics (pp. 20-29). Stroudsburg, PA, USA: Association for Computational Linguistics (ACL).Abstract
Multilingual speakers are able to switch from
one language to the other (“code-switch”) be-
tween or within sentences. Because the under-
lying cognitive mechanisms are not well un-
derstood, in this study we use computational
cognitive modeling to shed light on the pro-
cess of code-switching. We employed the
Bilingual Dual-path model, a Recurrent Neu-
ral Network of bilingual sentence production
(Tsoukala et al., 2017) and simulated sentence
production in simultaneous Spanish-English
bilinguals. Our first goal was to investigate
whether the model would code-switch with-
out being exposed to code-switched training
input. The model indeed produced code-
switches even without any exposure to such
input and the patterns of code-switches are
in line with earlier linguistic work (Poplack,
1980). The second goal of this study was to
investigate an auxiliary phrase asymmetry that
exists in Spanish-English code-switched pro-
duction. Using this cognitive model, we ex-
amined a possible cause for this asymmetry.
To our knowledge, this is the first computa-
tional cognitive model that aims to simulate
code-switched sentence production. -
Tsuji, S., Cristia, A., Frank, M. C., & Bergmann, C. (2020). Addressing publication bias in Meta-Analysis: Empirical findings from community-augmented meta-analyses of infant language development. Zeitschrift für Psychologie, 228(1), 50-61. doi:10.1027/2151-2604/a000393.
Abstract
Meta-analyses are an indispensable research synthesis tool for characterizing bodies of literature and advancing theories. One important open question concerns the inclusion of unpublished data into meta-analyses. Finding such studies can be effortful, but their exclusion potentially leads to consequential biases like overestimation of a literature’s mean effect. We address two questions about unpublished data using MetaLab, a collection of community-augmented meta-analyses focused on developmental psychology. First, we assess to what extent MetaLab datasets include gray literature, and by what search strategies they are unearthed. We find that an average of 11% of datapoints are from unpublished literature; standard search strategies like database searches, complemented with individualized approaches like including authors’ own data, contribute the majority of this literature. Second, we analyze the effect of including versus excluding unpublished literature on estimates of effect size and publication bias, and find this decision does not affect outcomes. We discuss lessons learned and implications.Additional information
Link to Dataset on PsychArchives -
Tulling, M., Law, R., Cournane, A., & Pylkkänen, L. (2020). Neural correlates of modal displacement and discourse-updating under (un)certainty. eNeuro, 8(1): 0290-20.2020. doi:10.1523/ENEURO.0290-20.2020.
Abstract
A hallmark of human thought is the ability to think about not just the actual world, but also about alternative ways the world could be. One way to study this contrast is through language. Language has grammatical devices for expressing possibilities and necessities, such as the words might or must. With these devices, called “modal expressions,” we can study the actual vs. possible contrast in a highly controlled way. While factual utterances such as “There is a monster under my bed” update the here-and-now of a discourse model, a modal version of this sentence, “There might be a monster under my bed,” displaces from the here-and-now and merely postulates a possibility. We used magnetoencephalography (MEG) to test whether the processes of discourse updating and modal displacement dissociate in the brain. Factual and modal utterances were embedded in short narratives, and across two experiments, factual expressions increased the measured activity over modal expressions. However, the localization of the increase appeared to depend on perspective: signal localizing in right temporo-parietal areas increased when updating others’ beliefs, while frontal medial areas seem sensitive to updating one’s own beliefs. The presence of modal displacement did not elevate MEG signal strength in any of our analyses. In sum, this study identifies potential neural signatures of the process by which facts get added to our mental representation of the world.Competing Interest StatementThe authors have declared no competing interest.Additional information
Link to Preprint on BioRxiv -
Udden, J., & Männel, C. (2018). Artificial grammar learning and its neurobiology in relation to language processing and development. In S.-A. Rueschemeyer, & M. G. Gaskell (
Eds. ), The Oxford Handbook of Psycholinguistics (2nd ed., pp. 755-783). Oxford: Oxford University Press.Abstract
The artificial grammar learning (AGL) paradigm enables systematic investigation of the acquisition of linguistically relevant structures. It is a paradigm of interest for language processing research, interfacing with theoretical linguistics, and for comparative research on language acquisition and evolution. This chapter presents a key for understanding major variants of the paradigm. An unbiased summary of neuroimaging findings of AGL is presented, using meta-analytic methods, pointing to the crucial involvement of the bilateral frontal operculum and regions in the right lateral hemisphere. Against a background of robust posterior temporal cortex involvement in processing complex syntax, the evidence for involvement of the posterior temporal cortex in AGL is reviewed. Infant AGL studies testing for neural substrates are reviewed, covering the acquisition of adjacent and non-adjacent dependencies as well as algebraic rules. The language acquisition data suggest that comparisons of learnability of complex grammars performed with adults may now also be possible with children. -
Uhlmann, M. (2020). Neurobiological models of sentence processing. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Ullas, S., Formisano, E., Eisner, F., & Cutler, A. (2020). Interleaved lexical and audiovisual information can retune phoneme boundaries. Attention, Perception & Psychophysics, 82, 2018-2026. doi:10.3758/s13414-019-01961-8.
Abstract
To adapt to situations in which speech perception is difficult, listeners can adjust boundaries between phoneme categories using perceptual learning. Such adjustments can draw on lexical information in surrounding speech, or on visual cues via speech-reading. In the present study, listeners proved they were able to flexibly adjust the boundary between two plosive/stop consonants, /p/-/t/, using both lexical and speech-reading information and given the same experimental design for both cue types. Videos of a speaker pronouncing pseudo-words and audio recordings of Dutch words were presented in alternating blocks of either stimulus type. Listeners were able to switch between cues to adjust phoneme boundaries, and resulting effects were comparable to results from listeners receiving only a single source of information. Overall, audiovisual cues (i.e., the videos) produced the stronger effects, commensurate with their applicability for adapting to noisy environments. Lexical cues were able to induce effects with fewer exposure stimuli and a changing phoneme bias, in a design unlike most prior studies of lexical retuning. While lexical retuning effects were relatively weaker compared to audiovisual recalibration, this discrepancy could reflect how lexical retuning may be more suitable for adapting to speakers than to environments. Nonetheless, the presence of the lexical retuning effects suggests that it may be invoked at a faster rate than previously seen. In general, this technique has further illuminated the robustness of adaptability in speech perception, and offers the potential to enable further comparisons across differing forms of perceptual learning. -
Ullas, S., Formisano, E., Eisner, F., & Cutler, A. (2020). Audiovisual and lexical cues do not additively enhance perceptual adaptation. Psychonomic Bulletin & Review, 27, 707-715. doi:10.3758/s13423-020-01728-5.
Abstract
When listeners experience difficulty in understanding a speaker, lexical and audiovisual (or lipreading) information can be a helpful source of guidance. These two types of information embedded in speech can also guide perceptual adjustment, also
known as recalibration or perceptual retuning. With retuning or recalibration, listeners can use these contextual cues to temporarily or permanently reconfigure internal representations of phoneme categories to adjust to and understand novel interlocutors more easily. These two types of perceptual learning, previously investigated in large part separately, are highly similar in allowing listeners to use speech-external information to make phoneme boundary adjustments. This study explored whether the two sources may work in conjunction to induce adaptation, thus emulating real life, in which listeners are indeed likely to encounter both types of cue together. Listeners who received combined audiovisual and lexical cues showed perceptual learning effects
similar to listeners who only received audiovisual cues, while listeners who received only lexical cues showed weaker effects compared with the two other groups. The combination of cues did not lead to additive retuning or recalibration effects, suggesting that lexical and audiovisual cues operate differently with regard to how listeners use them for reshaping perceptual categories.
Reaction times did not significantly differ across the three conditions, so none of the forms of adjustment were either aided or
hindered by processing time differences. Mechanisms underlying these forms of perceptual learning may diverge in numerous ways despite similarities in experimental applications.Additional information
Data and materials -
Ullas, S., Hausfeld, L., Cutler, A., Eisner, F., & Formisano, E. (2020). Neural correlates of phonetic adaptation as induced by lexical and audiovisual context. Journal of Cognitive Neuroscience, 32(11), 2145-2158. doi:10.1162/jocn_a_01608.
Abstract
When speech perception is difficult, one way listeners adjust is by reconfiguring phoneme category boundaries, drawing on contextual information. Both lexical knowledge and lipreading cues are used in this way, but it remains unknown whether these two differing forms of perceptual learning are similar at a neural level. This study compared phoneme boundary adjustments driven by lexical or audiovisual cues, using ultra-high-field 7-T fMRI. During imaging, participants heard exposure stimuli and test stimuli. Exposure stimuli for lexical retuning were audio recordings of words, and those for audiovisual recalibration were audio–video recordings of lip movements during utterances of pseudowords. Test stimuli were ambiguous phonetic strings presented without context, and listeners reported what phoneme they heard. Reports reflected phoneme biases in preceding exposure blocks (e.g., more reported /p/ after /p/-biased exposure). Analysis of corresponding brain responses indicated that both forms of cue use were associated with a network of activity across the temporal cortex, plus parietal, insula, and motor areas. Audiovisual recalibration also elicited significant occipital cortex activity despite the lack of visual stimuli. Activity levels in several ROIs also covaried with strength of audiovisual recalibration, with greater activity accompanying larger recalibration shifts. Similar activation patterns appeared for lexical retuning, but here, no significant ROIs were identified. Audiovisual and lexical forms of perceptual learning thus induce largely similar brain response patterns. However, audiovisual recalibration involves additional visual cortex contributions, suggesting that previously acquired visual information (on lip movements) is retrieved and deployed to disambiguate auditory perception. -
Ünal, E., & Papafragou, A. (2018). Evidentials, information sources and cognition. In A. Y. Aikhenvald (
Ed. ), The Oxford Handbook of Evidentiality (pp. 175-184). Oxford University Press. -
Ünal, E., & Papafragou, A. (2020). Relations between language and cognition: Evidentiality and sources of knowledge. Topics in Cognitive Science, 12(1), 115-135. doi:10.1111/tops.12355.
Abstract
Understanding and acquiring language involve mapping language onto conceptual representations. Nevertheless, several issues remain unresolved with respect to (a) how such mappings are performed, and (b) whether conceptual representations are susceptible to cross‐linguistic influences. In this article, we discuss these issues focusing on the domain of evidentiality and sources of knowledge. Empirical evidence in this domain yields growing support for the proposal that linguistic categories of evidentiality are tightly linked to, build on, and reflect conceptual representations of sources of knowledge that are shared across speakers of different languages. -
Ünal, E., & Papafragou, A. (2018). The relation between language and mental state reasoning. In J. Proust, & M. Fortier (
Eds. ), Metacognitive diversity: An interdisciplinary approach (pp. 153-169). Oxford: Oxford University Press. -
Ung, D. C., Iacono, G., Méziane, H., Blanchard, E., Papon, M.-A., Selten, M., van Rhijn, J.-R., Van Rhijn, J. R., Montjean, R., Rucci, J., Martin, S., Fleet, A., Birling, M.-C., Marouillat, S., Roepman, R., Selloum, M., Lux, A., Thépault, R.-A., Hamel, P., Mittal, K. and 7 moreUng, D. C., Iacono, G., Méziane, H., Blanchard, E., Papon, M.-A., Selten, M., van Rhijn, J.-R., Van Rhijn, J. R., Montjean, R., Rucci, J., Martin, S., Fleet, A., Birling, M.-C., Marouillat, S., Roepman, R., Selloum, M., Lux, A., Thépault, R.-A., Hamel, P., Mittal, K., Vincent, J. B., Dorseuil, O., Stunnenberg, H. G., Billuart, P., Nadif Kasri, N., Hérault, Y., & Laumonnier, F. (2018). Ptchd1 deficiency induces excitatory synaptic and cognitive dysfunctions in mouse. Molecular Psychiatry, 23, 1356-1367. doi:10.1038/mp.2017.39.
Abstract
Synapse development and neuronal activity represent fundamental processes for the establishment of cognitive function. Structural organization as well as signalling pathways from receptor stimulation to gene expression regulation are mediated by synaptic activity and misregulated in neurodevelopmental disorders such as autism spectrum disorder (ASD) and intellectual disability (ID). Deleterious mutations in the PTCHD1 (Patched domain containing 1) gene have been described in male patients with X-linked ID and/or ASD. The structure of PTCHD1 protein is similar to the Patched (PTCH1) receptor; however, the cellular mechanisms and pathways associated with PTCHD1 in the developing brain are poorly determined. Here we show that PTCHD1 displays a C-terminal PDZ-binding motif that binds to the postsynaptic proteins PSD95 and SAP102. We also report that PTCHD1 is unable to rescue the canonical sonic hedgehog (SHH) pathway in cells depleted of PTCH1, suggesting that both proteins are involved in distinct cellular signalling pathways. We find that Ptchd1 deficiency in male mice (Ptchd1−/y) induces global changes in synaptic gene expression, affects the expression of the immediate-early expression genes Egr1 and Npas4 and finally impairs excitatory synaptic structure and neuronal excitatory activity in the hippocampus, leading to cognitive dysfunction, motor disabilities and hyperactivity. Thus our results support that PTCHD1 deficiency induces a neurodevelopmental disorder causing excitatory synaptic dysfunction.Additional information
mp201739x1.pdf -
Urbanus, B. H. A., Peter, S., Fisher, S. E., & De Zeeuw, C. I. (2020). Region-specific Foxp2 deletions in cortex, striatum or cerebellum cannot explain vocalization deficits observed in spontaneous global knockouts. Scientific Reports, 10: 21631. doi:10.1038/s41598-020-78531-8.
Abstract
FOXP2 has been identified as a gene related to speech in humans, based on rare mutations that yield significant impairments in speech at the level of both motor performance and language comprehension. Disruptions of the murine orthologue Foxp2 in mouse pups have been shown to interfere with production of ultrasonic vocalizations (USVs). However, it remains unclear which structures are responsible for these deficits. Here, we show that conditional knockout mice with selective Foxp2 deletions targeting the cerebral cortex, striatum or cerebellum, three key sites of motor control with robust neural gene expression, do not recapture the profile of pup USV deficits observed in mice with global disruptions of this gene. Moreover, we observed that global Foxp2 knockout pups show substantive reductions in USV production as well as an overproduction of short broadband noise “clicks”, which was not present in the brain region-specific knockouts. These data indicate that deficits of Foxp2 expression in the cortex, striatum or cerebellum cannot solely explain the disrupted vocalization behaviours in global Foxp2 knockouts. Our findings raise the possibility that the impact of Foxp2 disruption on USV is mediated at least in part by effects of this gene on the anatomical prerequisites for vocalizing.Additional information
supplementary figures and table legends supplementary table 1 supplementary table 2 -
Vagliano, I., Galke, L., Mai, F., & Scherp, A. (2018). Using adversarial autoencoders for multi-modal automatic playlist continuation. In C.-W. Chen, P. Lamere, M. Schedl, & H. Zamani (
Eds. ), RecSys Challenge '18: Proceedings of the ACM Recommender Systems Challenge 2018 (pp. 5.1-5.6). New York: ACM. doi:10.1145/3267471.3267476.Abstract
The task of automatic playlist continuation is generating a list of recommended tracks that can be added to an existing playlist. By suggesting appropriate tracks, i. e., songs to add to a playlist, a recommender system can increase the user engagement by making playlist creation easier, as well as extending listening beyond the end of current playlist. The ACM Recommender Systems Challenge 2018 focuses on such task. Spotify released a dataset of playlists, which includes a large number of playlists and associated track listings. Given a set of playlists from which a number of tracks have been withheld, the goal is predicting the missing tracks in those playlists. We participated in the challenge as the team Unconscious Bias and, in this paper, we present our approach. We extend adversarial autoencoders to the problem of automatic playlist continuation. We show how multiple input modalities, such as the playlist titles as well as track titles, artists and albums, can be incorporated in the playlist continuation task. -
Valentin, B., Verga, L., Benoit, C.-E., Kotz, S. A., & Dalla Bella, S. (2018). Test-retest reliability of the battery for the assessment of auditory sensorimotor and timing abilities (BAASTA). Annals of Physical and Rehabilitation Medicine, 61(6), 395-400. doi:10.1016/j.rehab.2018.04.001.
Abstract
Perceptual and sensorimotor timing skills can be thoroughly assessed with the Battery for the Assessment of Auditory Sensorimotor and Timing Abilities (BAASTA). The battery has been used for testing rhythmic skills in healthy adults and patient populations (e.g., with Parkinson disease), showing sensitivity to timing and rhythm deficits. Here we assessed the test-retest reliability of the BAASTA in 20 healthy adults. Participants were tested twice with the BAASTA, implemented on a tablet interface, with a 2-week interval. They completed 4 perceptual tasks, namely, duration discrimination, anisochrony detection with tones and music, and the Beat Alignment Test (BAT). Moreover, they completed motor tasks via finger tapping, including unpaced and paced tapping with tones and music, synchronization-continuation, and adaptive tapping to a sequence with a tempo change. Despite high variability among individuals, the results showed good test-retest reliability in most tasks. A slight but significant improvement from test to retest was found in tapping with music, which may reflect a learning effect. In general, the BAASTA was found a reliable tool for evaluating timing and rhythm skills. -
Van den Heuvel, H., Oostdijk, N., Rowland, C. F., & Trilsbeek, P. (2020). The CLARIN Knowledge Centre for Atypical Communication Expertise. In N. Calzolari, F. Béchet, P. Blache, K. Choukri, C. Cieri, T. Declerck, S. Goggi, H. Isahara, B. Maegaard, J. Mariani, H. Mazo, A. Moreno, J. Odijk, & S. Piperidis (
Eds. ), Proceedings of the 12th Language Resources and Evaluation Conference (LREC 2020) (pp. 3312-3316). Marseille, France: European Language Resources Association.Abstract
This paper introduces a new CLARIN Knowledge Center which is the K-Centre for Atypical Communication Expertise (ACE for short) which has been established at the Centre for Language and Speech Technology (CLST) at Radboud University. Atypical communication is an umbrella term used here to denote language use by second language learners, people with language disorders or those suffering from language disabilities, but also more broadly by bilinguals and users of sign languages. It involves multiple modalities (text, speech, sign, gesture) and encompasses different developmental stages. ACE closely collaborates with The Language Archive (TLA) at the Max Planck Institute for Psycholinguistics in order to safeguard GDPR-compliant data storage and access. We explain the mission of ACE and show its potential on a number of showcases and a use case. -
Van Es, M. W. J. (2020). On the role of oscillatory synchrony in neural processing and behavior. PhD Thesis, Radboud University Nijmegen, Nijmegen.
Additional information
full text via Radboud Repository -
Van Dooren, A. (2020). The temporal perspective of epistemics in Dutch. In M. Franke, N. Kompa, M. Liu, J. L. Mueller, & J. Schwab (
Eds. ), Proceedings of Sinn Und Bedeutung 24 (pp. 143-160). Osnabrück: Osnabrück University.Abstract
A series of experiments is conducted on naïve native speakers of Dutch and English to study the scope relation between tense and epistemic modality. The results are consistent with the claim that epistemics scope over tense (Stowell 2004, Hacquard 2006, a.o.), and challenge recent research that states that epistemics can, or must, scope under tense (von Fintel and Gillies 2007, Rullmann & Matthewson 2018): Dutch and English participants in a Truth Value Judgment Task judge sentences to be false when the past tense forms of the modals have to and moeten 'have to' are used to make an epistemic claim that held at a time before speech time, and true when they are used to make an epistemic claim that holds at speech time. Moreover, English participants in an Acceptability Judgment Task judge sentences to be infelicitous when the same past tense form of have to is used to make an epistemic claim that held at a time before speech time. Besides these general patterns, the results show variation within and across the two languages, which leads to interesting new questions about the interaction between tense and (epistemic) modality. -
Van der Meer, D., Sønderby, I. E., Kaufmann, T., Walters, G. B., Abdellaoui, A., Ames, D., Amunts, K., Andersson, M., Armstrong, N. J., Bernard, M., Blackburn, N. B., Blangero, J., Boomsma, D. I., Brodaty, H., Brouwer, R. M., Bülow, R., Cahn, W., Calhoun, V. D., Caspers, S., Cavalleri, G. L. and 112 moreVan der Meer, D., Sønderby, I. E., Kaufmann, T., Walters, G. B., Abdellaoui, A., Ames, D., Amunts, K., Andersson, M., Armstrong, N. J., Bernard, M., Blackburn, N. B., Blangero, J., Boomsma, D. I., Brodaty, H., Brouwer, R. M., Bülow, R., Cahn, W., Calhoun, V. D., Caspers, S., Cavalleri, G. L., Ching, C. R. K., Cichon, S., Ciufolini, S., Corvin, A., Crespo-Facorro, B., Curran, J. E., Dalvie, S., Dazzan, P., De Geus, E. J. C., De Zubicaray, G. I., De Zwarte, S. M. C., Delanty, N., Den Braber, A., Desrivieres, S., Di Forti, M., Doherty, J. L., Donohoe, G., Ehrlich, S., Eising, E., Espeseth, T., Fisher, S. E., Fladby, T., Frei, O., Frouin, V., Fukunaga, M., Gareau, T., Glahn, D. C., Grabe, H. J., Groenewold, N. A., Gústafsson, Ó., Haavik, J., Haberg, A. K., Hashimoto, R., Hehir-Kwa, J. Y., Hibar, D. P., Hillegers, M. H. J., Hoffmann, P., Holleran, L., Hottenga, J.-J., Hulshoff Pol, H. E., Ikeda, M., Jacquemont, S., Jahanshad, N., Jockwitz, C., Johansson, S., Jönsson, E. G., Kikuchi, M., Knowles, E. E. M., Kwok, J. B., Le Hellard, S., Linden, D. E. J., Liu, J., Lundervold, A., Lundervold, A. J., Martin, N. G., Mather, K. A., Mathias, S. R., McMahon, K. L., McRae, A. F., Medland, S. E., Moberget, T., Moreau, C., Morris, D. W., Mühleisen, T. W., Murray, R. M., Nordvik, J. E., Nyberg, L., Olde Loohuis, L. M., Ophoff, R. A., Owen, M. J., Paus, T., Pausova, Z., Peralta, J. M., Pike, B., Prieto, C., Quinlan, E. B., Reinbold, C. S., Reis Marques, T., Rucker, J. J. H., Sachdev, P. S., Sando, S. B., Schofield, P. R., Schork, A. J., Schumann, G., Shin, J., Shumskaya, E., Silva, A. I., Sisodiya, S. M., Steen, V. M., Stein, D. J., Strike, L. T., Tamnes, C. K., Teumer, A., Thalamuthu, A., Tordesillas-Gutiérrez, D., Uhlmann, A., Úlfarsson, M. Ö., Van 't Ent, D., Van den Bree, M. B. M., Vassos, E., Wen, W., Wittfeld, K., Wright, M. J., Zayats, T., Dale, A. M., Djurovic, S., Agartz, I., Westlye, L. T., Stefánsson, H., Stefánsson, K., Thompson, P. M., & Andreassen, O. A. (2020). Association of copy number variation of the 15q11.2 BP1-BP2 region with cortical and subcortical morphology and cognition. JAMA Psychiatry, 77(4), 420-430. doi:10.1001/jamapsychiatry.2019.3779.
Abstract
Importance Recurrent microdeletions and duplications in the genomic region 15q11.2 between breakpoints 1 (BP1) and 2 (BP2) are associated with neurodevelopmental disorders. These structural variants are present in 0.5% to 1.0% of the population, making 15q11.2 BP1-BP2 the site of the most prevalent known pathogenic copy number variation (CNV). It is unknown to what extent this CNV influences brain structure and affects cognitive abilities.
Objective To determine the association of the 15q11.2 BP1-BP2 deletion and duplication CNVs with cortical and subcortical brain morphology and cognitive task performance.
Design, Setting, and Participants In this genetic association study, T1-weighted brain magnetic resonance imaging were combined with genetic data from the ENIGMA-CNV consortium and the UK Biobank, with a replication cohort from Iceland. In total, 203 deletion carriers, 45 247 noncarriers, and 306 duplication carriers were included. Data were collected from August 2015 to April 2019, and data were analyzed from September 2018 to September 2019.
Main Outcomes and Measures The associations of the CNV with global and regional measures of surface area and cortical thickness as well as subcortical volumes were investigated, correcting for age, age2, sex, scanner, and intracranial volume. Additionally, measures of cognitive ability were analyzed in the full UK Biobank cohort.
Results Of 45 756 included individuals, the mean (SD) age was 55.8 (18.3) years, and 23 754 (51.9%) were female. Compared with noncarriers, deletion carriers had a lower surface area (Cohen d = −0.41; SE, 0.08; P = 4.9 × 10−8), thicker cortex (Cohen d = 0.36; SE, 0.07; P = 1.3 × 10−7), and a smaller nucleus accumbens (Cohen d = −0.27; SE, 0.07; P = 7.3 × 10−5). There was also a significant negative dose response on cortical thickness (β = −0.24; SE, 0.05; P = 6.8 × 10−7). Regional cortical analyses showed a localization of the effects to the frontal, cingulate, and parietal lobes. Further, cognitive ability was lower for deletion carriers compared with noncarriers on 5 of 7 tasks.
Conclusions and Relevance These findings, from the largest CNV neuroimaging study to date, provide evidence that 15q11.2 BP1-BP2 structural variation is associated with brain morphology and cognition, with deletion carriers being particularly affected. The pattern of results fits with known molecular functions of genes in the 15q11.2 BP1-BP2 region and suggests involvement of these genes in neuronal plasticity. These neurobiological effects likely contribute to the association of this CNV with neurodevelopmental disorders. -
Van der Meer, D., Rokicki, J., Kaufmann, T., Córdova-Palomera, A., Moberget, T., Alnæs, D., Bettella, F., Frei, O., Trung Doan, N., Sønderby, I. E., Smeland, O. B., Agartz, I., Bertolino, A., Bralten, J., Brandt, C. L., Buitelaar, J. K., Djurovic, S., Van Donkelaar, M. M. J., Dørum, E. S., Espeseth, T. and 34 moreVan der Meer, D., Rokicki, J., Kaufmann, T., Córdova-Palomera, A., Moberget, T., Alnæs, D., Bettella, F., Frei, O., Trung Doan, N., Sønderby, I. E., Smeland, O. B., Agartz, I., Bertolino, A., Bralten, J., Brandt, C. L., Buitelaar, J. K., Djurovic, S., Van Donkelaar, M. M. J., Dørum, E. S., Espeseth, T., Faraone, S. V., Fernandez, G., Fisher, S. E., Franke, B., Haatveit, B., Hartman, C., Hoekstra, P. J., Haberg, A. K., Jönsson, E. G., Kolskår, K. K., Le Hellard, S., Lund, M. J., Lundervold, A. J., Lundervold, A., Melle, I., Monereo Sánchez, J., Norbom, L. C., Nordvik, J. E., Nyberg, L., Oosterlaan, J., Papalino, M., Papassotiropoulos, A., Pergola, G., De Quervain, D. J. F., Richard, G., Sanders, A.-M., Selvaggi, P., Shumskaya, E., Steen, V. M., Tønnesen, S., Ulrichsen, K. M., Zwiers, M., Andreassen, O. A., & Westlye, L. T. (2020). Brain scans from 21297 individuals reveal the genetic architecture of hippocampal subfield volumes. Molecular Psychiatry, 25, 3053-3065. doi:10.1038/s41380-018-0262-7.
Abstract
The hippocampus is a heterogeneous structure, comprising histologically distinguishable subfields. These subfields are differentially involved in memory consolidation, spatial navigation and pattern separation, complex functions often impaired in individuals with brain disorders characterized by reduced hippocampal volume, including Alzheimer’s disease (AD) and schizophrenia. Given the structural and functional heterogeneity of the hippocampal formation, we sought to characterize the subfields’ genetic architecture. T1-weighted brain scans (n = 21,297, 16 cohorts) were processed with the hippocampal subfields algorithm in FreeSurfer v6.0. We ran a genome-wide association analysis on each subfield, co-varying for whole hippocampal volume. We further calculated the single-nucleotide polymorphism (SNP)-based heritability of 12 subfields, as well as their genetic correlation with each other, with other structural brain features and with AD and schizophrenia. All outcome measures were corrected for age, sex and intracranial volume. We found 15 unique genome-wide significant loci across six subfields, of which eight had not been previously linked to the hippocampus. Top SNPs were mapped to genes associated with neuronal differentiation, locomotor behaviour, schizophrenia and AD. The volumes of all the subfields were estimated to be heritable (h2 from 0.14 to 0.27, all p < 1 × 10–16) and clustered together based on their genetic correlations compared with other structural brain features. There was also evidence of genetic overlap of subicular subfield volumes with schizophrenia. We conclude that hippocampal subfields have partly distinct genetic determinants associated with specific biological processes and traits. Taking into account this specificity may increase our understanding of hippocampal neurobiology and associated pathologies.Additional information
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Van den Broek, G., Takashima, A., Segers, E., & Verhoeven, L. (2018). Contextual Richness and Word Learning: Context Enhances Comprehension but Retrieval Enhances Retention. Language Learning, 68(2), 546-585. doi:10.1111/lang.12285.
Abstract
Learning new vocabulary from context typically requires multiple encounters during which word meaning can be retrieved from memory or inferred from context. We compared the effect of memory retrieval and context inferences on short‐ and long‐term retention in three experiments. Participants studied novel words and then practiced the words either in an uninformative context that required the retrieval of word meaning from memory (“I need the funguo”) or in an informative context from which word meaning could be inferred (“I want to unlock the door: I need the funguo”). The informative context facilitated word comprehension during practice. However, later recall of word form and meaning and word recognition in a new context were better after successful retrieval practice and retrieval practice with feedback than after context‐inference practice. These findings suggest benefits of retrieval during contextualized vocabulary learning whereby the uninformative context enhanced word retention by triggering memory retrieval. -
Van Os, M., De Jong, N. H., & Bosker, H. R. (2020). Fluency in dialogue: Turn‐taking behavior shapes perceived fluency in native and nonnative speech. Language Learning, 70(4), 1183-1217. doi:10.1111/lang.12416.
Abstract
Fluency is an important part of research on second language learning, but most research on language proficiency typically has not included oral fluency as part of interaction, even though natural communication usually occurs in conversations. The present study considered aspects of turn-taking behavior as part of the construct of fluency and investigated whether these aspects differentially influence perceived fluency ratings of native and non-native speech. Results from two experiments using acoustically manipulated speech showed that, in native speech, too ‘eager’ (interrupting a question with a fast answer) and too ‘reluctant’ answers (answering slowly after a long turn gap) negatively affected fluency ratings. However, in non-native speech, only too ‘reluctant’ answers led to lower fluency ratings. Thus, we demonstrate that acoustic properties of dialogue are perceived as part of fluency. By adding to our current understanding of dialogue fluency, these lab-based findings carry implications for language teaching and assessmentAdditional information
data + R analysis script via osf -
Van Rhijn, J. R., Fisher, S. E., Vernes, S. C., & Nadif Kasri, N. (2018). Foxp2 loss of function increases striatal direct pathway inhibition via increased GABA release. Brain Structure and Function, 223(9), 4211-4226. doi:10.1007/s00429-018-1746-6.
Abstract
Heterozygous mutations of the Forkhead-box protein 2 (FOXP2) gene in humans cause childhood apraxia of speech. Loss of Foxp2 in mice is known to affect striatal development and impair motor skills. However, it is unknown if striatal excitatory/inhibitory balance is affected during development and if the imbalance persists into adulthood. We investigated the effect of reduced Foxp2 expression, via a loss-of-function mutation, on striatal medium spiny neurons (MSNs). Our data show that heterozygous loss of Foxp2 decreases excitatory (AMPA receptor-mediated) and increases inhibitory (GABA receptor-mediated) currents in D1 dopamine receptor positive MSNs of juvenile and adult mice. Furthermore, reduced Foxp2 expression increases GAD67 expression, leading to both increased presynaptic content and release of GABA. Finally, pharmacological blockade of inhibitory activity in vivo partially rescues motor skill learning deficits in heterozygous Foxp2 mice. Our results suggest a novel role for Foxp2 in the regulation of striatal direct pathway activity through managing inhibitory drive.Additional information
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Van Donkelaar, M. M. J., Hoogman, M., Shumskaya, E., Buitelaar, J. K., Bralten, J., & Franke, B. (2020). Monoamine and neuroendocrine gene-sets associate with frustration-based aggression in a gender-specific manner. European Neuropsychopharmacology, 30, 75-86. doi:10.1016/j.euroneuro.2017.11.016.
Abstract
Investigating phenotypic heterogeneity in aggression and understanding the molecular biological basis of aggression subtypes may lead to new prevention and treatment options. In the current study, we evaluated the taxonomy of aggression and examined specific genetic mechanisms underlying aggression subtypes in healthy males and females. Confirmatory Factor Analysis (CFA) was used to replicate a recently reported three-factor model of the Reactive Proactive Questionnaire (RPQ) in healthy adults (n=661; median age 24.0 years; 41% male). Gene-set association analysis, aggregating common genetic variants within (a combination of) three molecular pathways previously implicated in aggression, i.e. serotonergic, dopaminergic, and neuroendocrine signaling, was conducted with MAGMA software in males and females separately (total n=395) for aggression subtypes. We replicate the three-factor CFA model of the RPQ, and found males to score significantly higher on one of these factors compared to females: proactive aggression. The genetic association analysis showed a female-specific association of genetic variation in the combined gene-set with a different factor of the RPQ; reactive aggression due to internal frustration. Both the neuroendocrine and serotonergic gene-sets contributed significantly to this association. Our genetic findings are subtype- and sex-specific, stressing the value of efforts to reduce heterogeneity in research of aggression etiology. Importantly, subtype- and sex-differences in the underlying pathophysiology of aggression suggest that optimal treatment options will have to be tailored to the individual patient. Male and female needs of intervention might differ, stressing the need for sex-specific further research of aggression. Our work highlights opportunities for sample size maximization offered by population-based studies of aggression. -
Van Bergen, G., & Bosker, H. R. (2018). Linguistic expectation management in online discourse processing: An investigation of Dutch inderdaad 'indeed' and eigenlijk 'actually'. Journal of Memory and Language, 103, 191-209. doi:10.1016/j.jml.2018.08.004.
Abstract
Interpersonal discourse particles (DPs), such as Dutch inderdaad (≈‘indeed’) and eigenlijk (≈‘actually’) are highly frequent in everyday conversational interaction. Despite extensive theoretical descriptions of their polyfunctionality, little is known about how they are used by language comprehenders. In two visual world eye-tracking experiments involving an online dialogue completion task, we asked to what extent inderdaad, confirming an inferred expectation, and eigenlijk, contrasting with an inferred expectation, influence real-time understanding of dialogues. Answers in the dialogues contained a DP or a control adverb, and a critical discourse referent was replaced by a beep; participants chose the most likely dialogue completion by clicking on one of four referents in a display. Results show that listeners make rapid and fine-grained situation-specific inferences about the use of DPs, modulating their expectations about how the dialogue will unfold. Findings further specify and constrain theories about the conversation-managing function and polyfunctionality of DPs. -
Van Campen, A. D., Kunert, R., Van den Wildenberg, W. P. M., & Ridderinkhof, K. R. (2018). Repetitive transcranial magnetic stimulation over inferior frontal cortex impairs the suppression (but not expression) of action impulses during action conflict. Psychophysiology, 55(3): e13003. doi:10.1111/psyp.13003.
Abstract
In the recent literature, the effects of noninvasive neurostimulation on cognitive functioning appear to lack consistency and replicability. We propose that such effects may be concealed unless dedicated, sensitive, and process-specific dependent measures are used. The expression and subsequent suppression of response capture are often studied using conflict tasks. Response-time distribution analyses have been argued to provide specific measures of the susceptibility to make fast impulsive response errors, as well as the proficiency of the selective suppression of these impulses. These measures of response capture and response inhibition are particularly sensitive to experimental manipulations and clinical deficiencies that are typically obfuscated in commonly used overall performance analyses. Recent work using structural and functional imaging techniques links these behavioral outcome measures to the integrity of frontostriatal networks. These studies suggest that the presupplementary motor area (pre-SMA) is linked to the susceptibility to response capture whereas the right inferior frontal cortex (rIFC) is associated with the selective suppression of action impulses. Here, we used repetitive transcranial magnetic stimulation (rTMS) to test the causal involvement of these two cortical areas in response capture and inhibition in the Simon task. Disruption of rIFC function specifically impaired selective suppression of conflicting action tendencies, whereas the anticipated increase of fast impulsive errors after perturbing pre-SMA function was not confirmed. These results provide a proof of principle of the notion that the selection of appropriate dependent measures is perhaps crucial to establish the effects of neurostimulation on specific cognitive functions. -
Van Leeuwen, E. J. C., Cohen, E., Collier-Baker, E., Rapold, C. J., Schäfer, M., Schütte, S., & Haun, D. B. M. (2018). The development of human social learning across seven societies. Nature Communications, 9: 2076. doi:10.1038/s41467-018-04468-2.
Abstract
Social information use is a pivotal characteristic of the human species. Avoiding the cost of individual exploration, social learning confers substantial fitness benefits under a wide variety of environmental conditions, especially when the process is governed by biases toward relative superiority (e.g., experts, the majority). Here, we examine the development of social information use in children aged 4–14 years (n = 605) across seven societies in a standardised social learning task. We measured two key aspects of social information use: general reliance on social information and majority preference. We show that the extent to which children rely on social information depends on children’s cultural background. The extent of children’s majority preference also varies cross-culturally, but in contrast to social information use, the ontogeny of majority preference follows a U-shaped trajectory across all societies. Our results demonstrate both cultural continuity and diversity in the realm of human social learning.Additional information
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Van Donkelaar, M. M. J., Hoogman, M., Pappa, I., Tiemeier, H., Buitelaar, J. K., Franke, B., & Bralten, J. (2018). Pleiotropic Contribution of MECOM and AVPR1A to Aggression and Subcortical Brain Volumes. Frontiers in Behavioral Neuroscience, 12: 61. doi:10.3389/fnbeh.2018.00061.
Abstract
Reactive and proactive subtypes of aggression have been recognized to help parse etiological heterogeneity of this complex phenotype. With a heritability of about 50%, genetic factors play a role in the development of aggressive behavior. Imaging studies implicate brain structures related to social behavior in aggression etiology, most notably the amygdala and striatum. This study aimed to gain more insight into the pathways from genetic risk factors for aggression to aggression phenotypes. To this end, we conducted genome-wide gene-based cross-trait meta-analyses of aggression with the volumes of amygdala, nucleus accumbens and caudate nucleus to identify genes influencing both aggression and aggression-related brain volumes. We used data of large-scale genome-wide association studies (GWAS) of: (a) aggressive behavior in children and adolescents (EAGLE, N = 18,988); and (b) Magnetic Resonance Imaging (MRI)-based volume measures of aggression-relevant subcortical brain regions (ENIGMA2, N = 13,171). Second, the identified genes were further investigated in a sample of healthy adults (mean age (SD) = 25.28 (4.62) years; 43% male) who had genome-wide genotyping data and questionnaire data on aggression subtypes available (Brain Imaging Genetics, BIG, N = 501) to study their effect on reactive and proactive subtypes of aggression. Our meta-analysis identified two genes, MECOM and AVPR1A, significantly associated with both aggression risk and nucleus accumbens (MECOM) and amygdala (AVPR1A) brain volume. Subsequent in-depth analysis of these genes in healthy adults (BIG), including sex as an interaction term in the model, revealed no significant subtype-specific gene-wide associations. Using cross-trait meta-analysis of brain measures and psychiatric phenotypes, this study generated new hypotheses about specific links between genes, the brain and behavior. Results indicate that MECOM and AVPR1A may exert an effect on aggression through mechanisms involving nucleus accumbens and amygdala volumes, respectively.Additional information
https://www.frontiersin.org/articles/10.3389/fnbeh.2018.00061/full#supplementar… -
Van Leeuwen, E. J. C., Cronin, K. A., & Haun, D. B. M. (2018). Population-specific social dynamics in chimpanzees. Proceedings of the National Academy of Sciences of the United States of America, 115(45), 11393-11400. doi:10.1073/pnas.1722614115.
Abstract
Understanding intraspecific variation in sociality is essential for characterizing the flexibility and evolution of social systems, yet its study in nonhuman animals is rare. Here, we investigated whether chimpanzees exhibit population-level differences in sociality that cannot be easily explained by differences in genetics or ecology. We compared social proximity and grooming tendencies across four semiwild populations of chimpanzees living in the same ecological environment over three consecutive years, using both linear mixed models and social network analysis. Results indicated temporally stable, population-level differences in dyadic-level sociality. Moreover, group cohesion measures capturing network characteristics beyond dyadic interactions (clustering, modularity, and social differentiation) showed population-level differences consistent with the dyadic indices. Subsequently, we explored whether the observed intraspecific variation in sociality could be attributed to cultural processes by ruling out alternative sources of variation including the influences of ecology, genetics, and differences in population demographics. We conclude that substantial variation in social behavior exists across neighboring populations of chimpanzees and that this variation is in part shaped by cultural processes.Additional information
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Van de Ven, M., & Ernestus, M. (2018). The role of segmental and durational cues in the processing of reduced words. Language and Speech, 61(3), 358-383. doi:10.1177/0023830917727774.
Abstract
In natural conversations, words are generally shorter and they often lack segments. It is unclear to what extent such durational and segmental reductions affect word recognition. The present study investigates to what extent reduction in the initial syllable hinders word comprehension, which types of segments listeners mostly rely on, and whether listeners use word duration as a cue in word recognition. We conducted three experiments in Dutch, in which we adapted the gating paradigm to study the comprehension of spontaneously uttered conversational speech by aligning the gates with the edges of consonant clusters or vowels. Participants heard the context and some segmental and/or durational information from reduced target words with unstressed initial syllables. The initial syllable varied in its degree of reduction, and in half of the stimuli the vowel was not clearly present. Participants gave too short answers if they were only provided with durational information from the target words, which shows that listeners are unaware of the reductions that can occur in spontaneous speech. More importantly, listeners required fewer segments to recognize target words if the vowel in the initial syllable was absent. This result strongly suggests that this vowel hardly plays a role in word comprehension, and that its presence may even delay this process. More important are the consonants and the stressed vowel. -
Van Arkel, J., Woensdregt, M., Dingemanse, M., & Blokpoel, M. (2020). A simple repair mechanism can alleviate computational demands of pragmatic reasoning: simulations and complexity analysis. In R. Fernández, & T. Linzen (
Eds. ), Proceedings of the 24th Conference on Computational Natural Language Learning (CoNLL 2020) (pp. 177-194). Stroudsburg, PA, USA: The Association for Computational Linguistics. doi:10.18653/v1/2020.conll-1.14.Abstract
How can people communicate successfully while keeping resource costs low in the face of ambiguity? We present a principled theoretical analysis comparing two strategies for disambiguation in communication: (i) pragmatic reasoning, where communicators reason about each other, and (ii) other-initiated repair, where communicators signal and resolve trouble interactively. Using agent-based simulations and computational complexity analyses, we compare the efficiency of these strategies in terms of communicative success, computation cost and interaction cost. We show that agents with a simple repair mechanism can increase efficiency, compared to pragmatic agents, by reducing their computational burden at the cost of longer interactions. We also find that efficiency is highly contingent on the mechanism, highlighting the importance of explicit formalisation and computational rigour. -
Van Lipzig, E. v., Creemers, A., & Don, J. (2020). Morphological processing in nominalizations. Linguistics in the Netherlands, 37, 165-179. doi:10.1075/avt.00044.lip.
Abstract
A major debate in psycholinguistics concerns the representation of morphological structure in the mental lexicon. We report the results of an auditory primed lexical decision experiment in which we tested whether verbs prime their nominalizations in Dutch. We find morphological priming effects with regular nominalizations (schorsen ‘suspend’ → schorsing ‘suspension’) as well as with irregular nominalizations (schieten ‘shoot’ → schot ‘shot’). On this basis, we claim that, despite the lack of phonological identity between stem and derivation in the case of irregular nominalizations, the morphological relation between the two forms, suffices to evoke a priming effect. However, an alternative explanation, according to which the semantic relation in combination with the phonological overlap accounts for the priming effect, cannot be excluded -
Vanderauwera, J., De Vos, A., Forkel, S. J., Catani, M., Wouters, J., Vandermosten, M., & Ghesquière, P. (2018). Neural organization of ventral white matter tracts parallels the initial steps of reading development: A DTI tractography study. Brain and Language, 183, 32-40. doi:10.1016/j.bandl.2018.05.007.
Abstract
Insight in the developmental trajectory of the neuroanatomical reading correlates is important to understand related cognitive processes and disorders. In adults, a dual pathway model has been suggested encompassing a dorsal phonological and a ventral orthographic white matter system. This dichotomy seems not present in pre-readers, and the specific role of ventral white matter in reading remains unclear. Therefore, the present longitudinal study investigated the relation between ventral white matter and cognitive processes underlying reading in children with a broad range of reading skills (n = 61). Ventral pathways of the reading network were manually traced using diffusion tractography: the inferior fronto-occipital fasciculus (IFOF), inferior longitudinal fasciculus (ILF) and uncinate fasciculus (UF). Pathways were examined pre-reading (5–6 years) and after two years of reading acquisition (7–8 years). Dimension reduction for the cognitive measures resulted in one component for pre-reading cognitive measures and a separate phonological and orthographic component for the early reading measures. Regression analyses revealed a relation between the pre-reading cognitive component and bilateral IFOF and left ILF. Interestingly, exclusively the left IFOF was related to the orthographic component, whereas none of the pathways was related to the phonological component. Hence, the left IFOF seems to serve as the lexical reading route, already in the earliest reading stages. -
Vanlangendonck, F., Takashima, A., Willems, R. M., & Hagoort, P. (2018). Distinguishable memory retrieval networks for collaboratively and non-collaboratively learned information. Neuropsychologia, 111, 123-132. doi:10.1016/j.neuropsychologia.2017.12.008.
Abstract
Learning often occurs in communicative and collaborative settings, yet almost all research into the neural basis of memory relies on participants encoding and retrieving information on their own. We investigated whether learning linguistic labels in a collaborative context at least partly relies on cognitively and neurally distinct representations, as compared to learning in an individual context. Healthy human participants learned labels for sets of abstract shapes in three different tasks. They came up with labels with another person in a collaborative communication task (collaborative condition), by themselves (individual condition), or were given pre-determined unrelated labels to learn by themselves (arbitrary condition). Immediately after learning, participants retrieved and produced the labels aloud during a communicative task in the MRI scanner. The fMRI results show that the retrieval of collaboratively generated labels as compared to individually learned labels engages brain regions involved in understanding others (mentalizing or theory of mind) and autobiographical memory, including the medial prefrontal cortex, the right temporoparietal junction and the precuneus. This study is the first to show that collaboration during encoding affects the neural networks involved in retrieval. -
Vanlangendonck, F., Peeters, D., Rüschemeyer, S.-A., & Dijkstra, T. (2020). Mixing the stimulus list in bilingual lexical decision turns cognate facilitation effects into mirrored inhibition effects. Bilingualism: Language and Cognition, 23(4), 836-844. doi:10.1017/S1366728919000531.
Abstract
To test the BIA+ and Multilink models’ accounts of how bilinguals process words with different degrees of cross-linguistic orthographic and semantic overlap, we conducted two experiments manipulating stimulus list composition. Dutch-English late bilinguals performed two English lexical decision tasks including the same set of cognates, interlingual homographs, English control words, and pseudowords. In one task, half of the pseudowords were replaced with Dutch words, requiring a ‘no’ response. This change from pure to mixed language list context was found to turn cognate facilitation effects into inhibition. Relative to control words, larger effects were found for cognate pairs with an increasing cross-linguistic form overlap. Identical cognates produced considerably larger effects than non-identical cognates, supporting their special status in the bilingual lexicon. Response patterns for different item types are accounted for in terms of the items’ lexical representation and their binding to ‘yes’ and ‘no’ responses in pure vs mixed lexical decision.Additional information
S1366728919000531sup001.pdf -
Vanlangendonck, F., Willems, R. M., & Hagoort, P. (2018). Taking common ground into account: Specifying the role of the mentalizing network in communicative language production. PLoS One, 13(10): e0202943. doi:10.1371/journal.pone.0202943.
Additional information
Data availability via Donders Repository -
Varma, S., Daselaar, S. M., Kessels, R. P. C., & Takashima, A. (2018). Promotion and suppression of autobiographical thinking differentially affect episodic memory consolidation. PLoS One, 13(8): e0201780. doi:10.1371/journal.pone.0201780.
Abstract
During a post-encoding delay period, the ongoing consolidation of recently acquired memories can suffer interference if the delay period involves encoding of new memories, or sensory stimulation tasks. Interestingly, two recent independent studies suggest that (i) autobiographical thinking also interferes markedly with ongoing consolidation of recently learned wordlist material, while (ii) a 2-Back task might not interfere with ongoing consolidation, possibly due to the suppression of autobiographical thinking. In this study, we directly compare these conditions against a quiet wakeful rest baseline to test whether the promotion (via familiar sound-cues) or suppression (via a 2-Back task) of autobiographical thinking during the post-encoding delay period can affect consolidation of studied wordlists in a negative or a positive way, respectively. Our results successfully replicate previous studies and show a significant interference effect (as compared to the rest condition) when learning is followed by familiar sound-cues that promote autobiographical thinking, whereas no interference effect is observed when learning is followed by the 2-Back task. Results from a post-experimental experience-sampling questionnaire further show significant differences in the degree of autobiographical thinking reported during the three post-encoding periods: highest in the presence of sound-cues and lowest during the 2-Back task. In conclusion, our results suggest that varying levels of autobiographical thought during the post-encoding period may modulate episodic memory consolidation.Additional information
6932372.zip http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0201780#sec019 -
Verdonschot, R. G., & Masuda, H. (2020). Sumacku or Smack? The value of analyzing acoustic signals when investigating the fundamental phonological unit of language production. Psychological Research, 84(3), 547-557. doi:10.1007/s00426-018-1073-9.
Abstract
An ongoing debate in the speech production literature suggests that the initial building block to build up speech sounds differs between languages. That is, Germanic languages are suggested to use the phoneme, but Japanese and Chinese are proposed to use the mora or syllable, respectively. Several studies investigated this matter from a chronometric perspective (i.e., RTs and accuracy). However, a less attention has been paid to the actual acoustic utterances. The current study investigated the verbal responses of two Japanese-English bilingual groups of different proficiency levels (i.e., high and low) when naming English words and found that the presence or absence of vowel epenthesis depended on proficiency. The results indicate that: (1) English word pronunciation by low-proficient Japanese English bilinguals is likely based on their L1 (Japanese) building block and (2) that future studies would benefit from analyzing the acoustic data as well when making inferences from chronometric data. -
Verdonschot, R. G., & Kinoshita, S. (2018). Mora or more? The phonological unit of Japanese word production in the Stroop color naming task. Memory & Cognition, 46(3), 410-425. doi:10.3758/s13421-017-0774-4.
Abstract
In English, Dutch, and other European languages, it is well established that the fundamental phonological unit in word production is the phoneme; in contrast, recent studies have shown that in Chinese it is the (atonal) syllable and in Japanese the mora. The present study investigated whether this cross-language variation in the size of the unit of word production is due to the type of script used in the language (i.e., alphabetic, morphosyllabic, or moraic). Capitalizing on the multiscriptal nature of Japanese, and using the Stroop color naming task, we show that the overlap in the initial mora between the color name and the written distractor facilitates color naming independent of script type. These results confirm the mora as the phonological unit of word production in Japanese, and establish the Stroop color naming task as a useful task for investigating the fundamental (or "proximate") phonological unit used in speech production. -
Verheijen, J., Wong, S. Y., Rowe, J. H., Raymond, K., Stoddard, J., Delmonte, O. M., Bosticardo, M., Dobbs, K., Niemela, J., Calzoni, E., Pai, S.-Y., Choi, U., Yamazaki, Y., Comeau, A. M., Janssen, E., Henderson, L., Hazen, M., Berry, G., Rosenzweig, S. D., Aldhekri, H. H. and 3 moreVerheijen, J., Wong, S. Y., Rowe, J. H., Raymond, K., Stoddard, J., Delmonte, O. M., Bosticardo, M., Dobbs, K., Niemela, J., Calzoni, E., Pai, S.-Y., Choi, U., Yamazaki, Y., Comeau, A. M., Janssen, E., Henderson, L., Hazen, M., Berry, G., Rosenzweig, S. D., Aldhekri, H. H., He, M., Notarangelo, L. D., & Morava, E. (2020). Defining a new immune deficiency syndrome: MAN2B2-CDG. Journal of Allergy and Clinical Immunology, 145(3), 1008-1011. doi:10.1016/j.jaci.2019.11.016.
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Verheijen, J., Van der Zee, J., Gijselinck, I., Van den Bossche, T., Dillen, L., Heeman, B., Gómez-Tortosa, E., Lladó, A., Sanchez-Valle, R., Graff, C., Pastor, P., Pastor, M. A., Benussi, L., Ghidoni, R., Binetti, G., Clarimon, J., De Mendonça, A., Gelpi, E., Tsolaki, M., Diehl-Schmid, J. and 12 moreVerheijen, J., Van der Zee, J., Gijselinck, I., Van den Bossche, T., Dillen, L., Heeman, B., Gómez-Tortosa, E., Lladó, A., Sanchez-Valle, R., Graff, C., Pastor, P., Pastor, M. A., Benussi, L., Ghidoni, R., Binetti, G., Clarimon, J., De Mendonça, A., Gelpi, E., Tsolaki, M., Diehl-Schmid, J., Nacmias, B., Almeida, M. R., Borroni, B., Matej, R., Ruiz, A., Engelborghs, S., Vandenberghe, R., De Deyn, P. P., Cruts, M., Van Broeckhoven, C., Sleegers, K., BELNEU Consortium, & EU EOD Consortium (2018). Common and rare TBK1 variants in early-onset Alzheimer disease in a European cohort. Neurobiology of Aging, 62, 245.e1-245.e7. doi:10.1016/j.neurobiolaging.2017.10.012.
Abstract
TANK-binding kinase 1 (TBK1) loss-of-function (LoF) mutations are known to cause frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS), often combined with memory deficits early in the disease course. We performed targeted resequencing of TBK1 in 1253 early onset Alzheimer's disease (EOAD) patients from 8 European countries to investigate whether pathogenic TBK1 mutations are enriched among patients with clinical diagnosis of EOAD. Variant frequencies were compared against 2117 origin-matched controls. We identified only 1 LoF mutation (p.Thr79del) in a patient clinically diagnosed with Alzheimer's disease and a positive family history of ALS. We did not observe enrichment of rare variants in EOAD patients compared to controls, nor of rare variants affecting NFκB induction. Of 3 common coding variants, rs7486100 showed evidence of association (OR 1.46 [95% CI 1.13–1.9]; p-value 0.01). Homozygous carriers of the risk allele showed reduced expression of TBK1 (p-value 0.03). Our findings are not indicative of a significant role for TBK1 mutations in EOAD. The association between common variants in TBK1, disease risk and reduced TBK1 expression warrants follow-up in FTD/ALS cohorts. © 2017 The Author(s)Additional information
Supplementary data -
Verheijen, J., Tahata, S., Kozicz, T., Witters, P., & Morava, E. (2020). Therapeutic approaches in Congenital Disorders of Glycosylation (CDG) involving N-linked glycosylation: An update. Genetics in Medicine, 22(2), 268-279. doi:10.1038/s41436-019-0647-2.
Abstract
Congenital disorders of glycosylation (CDG) are a group of clinically and genetically heterogeneous metabolic disorders. Over 150 CDG types have been described. Most CDG types are ultrarare disorders. CDG types affecting N-glycosylation are the most common type of CDG with emerging therapeutic possibilities. This review is an update on the available therapies for disorders affecting the N-linked glycosylation pathway. In the first part of the review, we highlight the clinical presentation, general principles of management, and disease-specific therapies for N-linked glycosylation CDG types, organized by organ system. The second part of the review focuses on the therapeutic strategies currently available and under development. We summarize the successful (pre-) clinical application of nutritional therapies, transplantation, activated sugars, gene therapy, and pharmacological chaperones and outline the anticipated expansion of the therapeutic possibilities in CDG. We aim to provide a comprehensive update on the treatable aspects of CDG types involving N-linked glycosylation, with particular emphasis on disease-specific treatment options for the involved organ systems; call for natural history studies; and present current and future therapeutic strategies for CDG. -
Verheijen, J., & Sleegers, K. (2018). Understanding Alzheimer Disease at the interface between genetics and transcriptomics. Trends in Genetics, 34(6), 434-447. doi:10.1016/j.tig.2018.02.007.
Abstract
Over 25 genes are known to affect the risk of developing Alzheimer disease (AD), the most common neurodegenerative dementia. However, mechanistic insights and improved disease management remains limited, due to difficulties in determining the functional consequences of genetic associations. Transcriptomics is increasingly being used to corroborate or enhance interpretation of genetic discoveries. These approaches, which include second and third generation sequencing, single-cell sequencing, and bioinformatics, reveal allele-specific events connecting AD risk genes to expression profiles, and provide converging evidence of pathophysiological pathways underlying AD. Simultaneously, they highlight brain region- and cell-type-specific expression patterns, and alternative splicing events that affect the straightforward relation between a genetic variant and AD, re-emphasizing the need for an integrated approach of genetics and transcriptomics in understanding AD. © 2018 The Authors -
Vernes, S. C. (2020). Understanding bat vocal learning to gain insight into speech and language. In A. Ravignani, C. Barbieri, M. Flaherty, Y. Jadoul, E. Lattenkamp, H. Little, M. Martins, K. Mudd, & T. Verhoef (
Eds. ), The Evolution of Language: Proceedings of the 13th International Conference (Evolang13) (pp. 6). Nijmegen: The Evolution of Language Conferences. -
Vernes, S. C., & Wilkinson, G. S. (2020). Behaviour, biology, and evolution of vocal learning in bats. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences, 375(1789): 20190061. doi:10.1098/rstb.2019.0061.
Abstract
The comparative approach can provide insight into the evolution of human speech, language and social communication by studying relevant traits in animal systems. Bats are emerging as a model system with great potential to shed light on these processes given their learned vocalizations, close social interactions, and mammalian brains and physiology. A recent framework outlined the multiple levels of investigation needed to understand vocal learning across a broad range of non-human species, including cetaceans, pinnipeds, elephants, birds and bats. Here, we apply this framework to the current state-of-the-art in bat research. This encompasses our understanding of the abilities bats have displayed for vocal learning, what is known about the timing and social structure needed for such learning, and current knowledge about the prevalence of the trait across the order. It also addresses the biology (vocal tract morphology, neurobiology and genetics) and evolution of this trait. We conclude by highlighting some key questions that should be answered to advance our understanding of the biological encoding and evolution of speech and spoken communication. This article is part of the theme issue 'What can animal communication teach us about human language?'Additional information
earlier version of article on BioRxiv -
Vernes, S. C. (2018). Vocal learning in bats: From genes to behaviour. In C. Cuskley, M. Flaherty, H. Little, L. McCrohon, A. Ravignani, & T. Verhoef (
Eds. ), Proceedings of the 12th International Conference on the Evolution of Language (EVOLANG XII) (pp. 516-518). Toruń, Poland: NCU Press. doi:10.12775/3991-1.128. -
Viebahn, M., McQueen, J. M., Ernestus, M., Frauenfelder, U. H., & Bürki, A. (2018). How much does orthography influence the processing of reduced word forms? Evidence from novel-word learning about French schwa deletion. The Quarterly Journal of Experimental Psychology, 71(11), 2378-2394. doi:10.1177/1747021817741859.
Abstract
This study examines the influence of orthography on the processing of reduced word forms. For this purpose, we compared the impact of phonological variation with the impact of spelling-sound consistency on the processing of words that may be produced with or without the vowel schwa. Participants learnt novel French words in which the vowel schwa was present or absent in the first syllable. In Experiment 1, the words were consistently produced without schwa or produced in a variable manner (i.e., sometimes produced with and sometimes produced without schwa). In Experiment 2, words were always produced in a consistent manner, but an orthographic exposure phase was included in which words that were produced without schwa were either spelled with or without the letter. Results from naming and eye-tracking tasks suggest that both phonological variation and spelling-sound consistency influence the processing of spoken novel words. However, the influence of phonological variation outweighs the effect of spelling-sound consistency. Our findings therefore suggest that the influence of orthography on the processing of reduced word forms is relatively small. -
Vogels, J., Howcroft, D. M., Tourtouri, E. N., & Demberg, V. (2020). How speakers adapt object descriptions to listeners under load. Language, Cognition and Neuroscience, 35(1), 78-92. doi:10.1080/23273798.2019.1648839.
Abstract
A controversial issue in psycholinguistics is the degree to which speakers employ audience design during language production. Hypothesising that a consideration of the listener’s needs is particularly relevant when the listener is under cognitive load, we had speakers describe objects for a listener performing an easy or a difficult simulated driving task. We predicted that speakers would introduce more redundancy in their descriptions in the difficult driving task, thereby accommodating the listener’s reduced cognitive capacity. The results showed that speakers did not adapt their descriptions to a change in the listener’s cognitive load. However, speakers who had experienced the driving task themselves before and who were presented with the difficult driving task first were more redundant than other speakers. These findings may suggest that speakers only consider the listener’s needs in the presence of strong enough cues, and do not update their beliefs about these needs during the task.
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