MPI group Population genetics


Group leader

Beate St Pourcain

 

Post doc

Ellen Verhoef

Sanjeevan Jahagirdar

 

PhD students

Nicole Ng

Danielle Admiraal
 

MSc students

Pedro Alonso Gonzalez

Julia Niehaus

 

Research assistant

Lucía De Hoyos

 

Student assistant

Rafael Zampakas

 

Alumni

Chin Yang Shapland

Marjolein van Donkelaar 

Mariska Barendse 

Laurence Howe (co-supervision with University of Bristol, Professor George Davey Smith and Dr Sarah Lewis)

Janne Vermeulen 

Jeffrey van der Ven 

Mitchell Olislagers 

Celeste Figaroa 

Tanguy Rubat du Mérac

Simone van den Bedem

Fenja Schlag

Anh Nguyen

Paola Moreno Ancalmo

 

 

Displaying 161 - 180 of 15536
  • Zimianiti, E., Ye, L., Hofman, A., Kievit, R., Rowland, C. F., & Donnelly, S. (2024). Between-item variability: Dutch past tense predictors. Poster presented at the 16th International Congress for the Study of Child Language (IASCL 2024), Prague, Czech Republic.
  • He, J., & Zhang, Q. (2024). Direct retrieval of orthographic representations in Chinese handwritten production: Evidence from a dynamic causal modeling study. Journal of Cognitive Neuroscience, 36(9), 1937-1962. doi:10.1162/jocn_a_02176.

    Abstract

    This present study identified an optimal model representing the relationship between orthography and phonology in Chinese handwritten production using dynamic causal modeling, and further explored how this model was modulated by word frequency and syllable frequency. Each model contained five volumes of interest in the left hemisphere (angular gyrus [AG], inferior frontal gyrus [IFG], middle frontal gyrus [MFG], superior frontal gyrus [SFG], and supramarginal gyrus [SMG]), with the IFG as the driven input area. Results showed the superiority of a model in which both the MFG and the AG connected with the IFG, supporting the orthography autonomy hypothesis. Word frequency modulated the AG → SFG connection (information flow from the orthographic lexicon to the orthographic buffer), and syllable frequency affected the IFG → MFG connection (information transmission from the semantic system to the phonological lexicon). This study thus provides new insights into the connectivity architecture of neural substrates involved in writing.
  • Skyra, Y., Garcia, R., & Kidd, E. (2024). Contrasting the cues of word order and case in German-speaking children’s thematic role assignment. Poster presented at the 29th Architectures and Mechanisms for Language Processing Conference (AMLaP 2024), Edinburgh, Scotland.
  • Weissbart, H., & Martin, A. E. (2024). The structure and statistics of language jointly shape cross-frequency neural dynamics during spoken language comprehension. Nature Communications, 15: 8850. doi:10.1038/s41467-024-53128-1.

    Abstract

    Humans excel at extracting structurally-determined meaning from speech despite inherent physical variability. This study explores the brain’s ability to predict and understand spoken language robustly. It investigates the relationship between structural and statistical language knowledge in brain dynamics, focusing on phase and amplitude modulation. Using syntactic features from constituent hierarchies and surface statistics from a transformer model as predictors of forward encoding models, we reconstructed cross-frequency neural dynamics from MEG data during audiobook listening. Our findings challenge a strict separation of linguistic structure and statistics in the brain, with both aiding neural signal reconstruction. Syntactic features have a more temporally spread impact, and both word entropy and the number of closing syntactic constituents are linked to the phase-amplitude coupling of neural dynamics, implying a role in temporal prediction and cortical oscillation alignment during speech processing. Our results indicate that structured and statistical information jointly shape neural dynamics during spoken language comprehension and suggest an integration process via a cross-frequency coupling mechanism
  • Wagner, M. A., Broersma, M., McQueen, J. M., Van Hout, R., & Lemhöfer, K. (2024). The case for a quantitative approach to the study of nonnative accent features. Language and Speech. Advance online publication. doi:10.1177/00238309241256653.

    Abstract

    Research with nonnative speech spans many different linguistic branches and topics. Most studies include one or a few well-known features of a particular accent. However, due to a lack of empirical studies, little is known about how common these features are among nonnative speakers or how uncommon they are among native speakers. Moreover, it remains to be seen whether findings from such studies generalize to lesser-known features. Here, we demonstrate a quantitative approach to study nonnative accent features using Dutch-accented English as an example. By analyzing the phonetic distances between transcriptions of speech samples, this approach can identify the features that best distinguish nonnative from native speech. In addition, we describe a method to test hypotheses about accent features by checking whether the prevalence of the features overall varies between native and nonnative speakers. Furthermore, we include English speakers from the United States and United Kingdom and native Dutch speakers from Belgium and The Netherlands to address the issue of regional accent variability in both the native and target language. We discuss the results concerning three observed features. Overall, the results provide empirical support for some well-known features of Dutch-accented English, but suggest that others may be infrequent among nonnatives or in fact frequent among natives. In addition, the findings reveal potentially new accent features, and factors that may modulate the expression of known features. Our study demonstrates a fruitful approach to study nonnative accent features that has the potential to expand our understanding of the phenomenon of accent.
  • Hintz, F., Voeten, C. C., Dobó, D., Lukics, K. S., & Lukács, Á. (2024). The role of general cognitive skills in integrating visual and linguistic information during sentence comprehension: Individual differences across the lifespan. Scientific Reports, 14: 17797. doi:10.1038/s41598-024-68674-3.

    Abstract

    Individuals exhibit massive variability in general cognitive skills that affect language processing. This variability is partly developmental. Here, we recruited a large sample of participants (N = 487), ranging from 9 to 90 years of age, and examined the involvement of nonverbal processing speed (assessed using visual and auditory reaction time tasks) and working memory (assessed using forward and backward Digit Span tasks) in a visual world task. Participants saw two objects on the screen and heard a sentence that referred to one of them. In half of the sentences, the target object could be predicted based on verb-selectional restrictions. We observed evidence for anticipatory processing on predictable compared to non-predictable trials. Visual and auditory processing speed had main effects on sentence comprehension and facilitated predictive processing, as evidenced by an interaction. We observed only weak evidence for the involvement of working memory in predictive sentence comprehension. Age had a nonlinear main effect (younger adults responded faster than children and older adults), but it did not differentially modulate predictive and non-predictive processing, nor did it modulate the involvement of processing speed and working memory. Our results contribute to delineating the cognitive skills that are involved in language-vision interactions.

    Additional information

    supplementary information
  • Amelink, J., Postema, M., Kong, X., Schijven, D., Carrion Castillo, A., Soheili-Nezhad, S., Sha, Z., Molz, B., Joliot, M., Fisher, S. E., & Francks, C. (2024). Imaging genetics of language network functional connectivity reveals links with language-related abilities, dyslexia and handedness. Communications Biology, 7: 1209. doi:10.1038/s42003-024-06890-3.

    Abstract

    Language is supported by a distributed network of brain regions with a particular contribution from the left hemisphere. A multi-level understanding of this network requires studying the genetic architecture of its functional connectivity and hemispheric asymmetry. We used resting state functional imaging data from 29,681 participants from the UK Biobank to measure functional connectivity between 18 left-hemisphere regions implicated in multimodal sentence-level processing, as well as their homotopic regions in the right-hemisphere, and interhemispheric connections. Multivariate genome-wide association analysis of this total network, based on common genetic variants (with population frequencies above 1%), identified 14 loci associated with network functional connectivity. Three of these loci were also associated with hemispheric differences of intrahemispheric connectivity. Polygenic dispositions to lower language-related abilities, dyslexia and left-handedness were associated with generally reduced leftward asymmetry of functional connectivity, but with some trait- and connection-specific exceptions. Exome-wide association analysis based on rare, protein-altering variants (frequencies < 1%) suggested 7 additional genes. These findings shed new light on the genetic contributions to language network connectivity and its asymmetry based on both common and rare genetic variants, and reveal genetic links to language-related traits and hemispheric dominance for hand preference.
  • Sekine, K., & Özyürek, A. (2024). Children benefit from gestures to understand degraded speech but to a lesser extent than adults. Frontiers in Psychology, 14: 1305562. doi:10.3389/fpsyg.2023.1305562.

    Abstract

    The present study investigated to what extent children, compared to adults, benefit from gestures to disambiguate degraded speech by manipulating speech signals and manual modality. Dutch-speaking adults (N = 20) and 6- and 7-year-old children (N = 15) were presented with a series of video clips in which an actor produced a Dutch action verb with or without an accompanying iconic gesture. Participants were then asked to repeat what they had heard. The speech signal was either clear or altered into 4- or 8-band noise-vocoded speech. Children had more difficulty than adults in disambiguating degraded speech in the speech-only condition. However, when presented with both speech and gestures, children reached a comparable level of accuracy to that of adults in the degraded-speech-only condition. Furthermore, for adults, the enhancement of gestures was greater in the 4-band condition than in the 8-band condition, whereas children showed the opposite pattern. Gestures help children to disambiguate degraded speech, but children need more phonological information than adults to benefit from use of gestures. Children’s multimodal language integration needs to further develop to adapt flexibly to challenging situations such as degraded speech, as tested in our study, or instances where speech is heard with environmental noise or through a face mask.

    Additional information

    supplemental material
  • Van der Werff, J., Ravignani, A., & Jadoul, Y. (2024). thebeat: A Python package for working with rhythms and other temporal sequences. Behavior Research Methods, 56, 3725-3736. doi:10.3758/s13428-023-02334-8.

    Abstract

    thebeat is a Python package for working with temporal sequences and rhythms in the behavioral and cognitive sciences, as well as in bioacoustics. It provides functionality for creating experimental stimuli, and for visualizing and analyzing temporal data. Sequences, sounds, and experimental trials can be generated using single lines of code. thebeat contains functions for calculating common rhythmic measures, such as interval ratios, and for producing plots, such as circular histograms. thebeat saves researchers time when creating experiments, and provides the first steps in collecting widely accepted methods for use in timing research. thebeat is an open-source, on-going, and collaborative project, and can be extended for use in specialized subfields. thebeat integrates easily with the existing Python ecosystem, allowing one to combine our tested code with custom-made scripts. The package was specifically designed to be useful for both skilled and novice programmers. thebeat provides a foundation for working with temporal sequences onto which additional functionality can be built. This combination of specificity and plasticity should facilitate research in multiple research contexts and fields of study.
  • Soheili-Nezhad, S., Schijven, D., Mars, R. B., Fisher, S. E., & Francks, C. (2024). Distinct impact modes of polygenic disposition to dyslexia in the adult brain. Science Advances, 10(51): eadq2754. doi:10.1126/sciadv.adq2754.

    Abstract

    Dyslexia is a common condition that impacts reading ability. Identifying affected brain networks has been hampered by limited sample sizes of imaging case-control studies. We focused instead on brain structural correlates of genetic disposition to dyslexia in large-scale population data. In over 30,000 adults (UK Biobank), higher polygenic disposition to dyslexia was associated with lower head and brain size, and especially reduced volume and/or altered fiber density in networks involved in motor control, language and vision. However, individual genetic variants disposing to dyslexia often had quite distinct patterns of association with brain structural features. Independent component analysis applied to brain-wide association maps for thousands of dyslexia-disposing genetic variants revealed multiple impact modes on the brain, that corresponded to anatomically distinct areas with their own genomic profiles of association. Polygenic scores for dyslexia-related cognitive and educational measures, as well as attention-deficit/hyperactivity disorder, showed similarities to dyslexia polygenic disposition in terms of brain-wide associations, with microstructure of the internal capsule consistently implicated. In contrast, lower volume of the primary motor cortex was only associated with higher dyslexia polygenic disposition among all traits. These findings robustly reveal heterogeneous neurobiological aspects of dyslexia genetic disposition, and whether they are shared or unique with respect to other genetically correlated traits.

    Additional information

    link to preprint
  • Akamine, S., Ghaleb, E., Rasenberg, M., Fernandez, R., Meyer, A. S., & Özyürek, A. (2024). Speakers align both their gestures and words not only to establish but also to maintain reference to create shared labels for novel objects in interaction. In L. K. Samuelson, S. L. Frank, A. Mackey, & E. Hazeltine (Eds.), Proceedings of the 46th Annual Meeting of the Cognitive Science Society (CogSci 2024) (pp. 2435-2442).

    Abstract

    When we communicate with others, we often repeat aspects of each other's communicative behavior such as sentence structures and words. Such behavioral alignment has been mostly studied for speech or text. Yet, language use is mostly multimodal, flexibly using speech and gestures to convey messages. Here, we explore the use of alignment in speech (words) and co-speech gestures (iconic gestures) in a referential communication task aimed at finding labels for novel objects in interaction. In particular, we investigate how people flexibly use lexical and gestural alignment to create shared labels for novel objects and whether alignment in speech and gesture are related over time. The present study shows that interlocutors establish shared labels multimodally, and alignment in words and iconic gestures are used throughout the interaction. We also show that the amount of lexical alignment positively associates with the amount of gestural alignment over time, suggesting a close relationship between alignment in the vocal and manual modalities.

    Additional information

    link to eScholarship
  • Ben-Ami, S., Shukla, Vishakha, V., Gupta, P., Shah, P., Ralekar, C., Ganesh, S., Gilad-Gutnick, S., Rubio-Fernández, P., & Sinha, P. (2024). Form perception as a bridge to real-world functional proficiency. In L. K. Samuelson, S. L. Frank, M. Toneva, A. Mackey, & E. Hazeltine (Eds.), Proceedings of the 46th Annual Meeting of the Cognitive Science Society (CogSci 2024) (pp. 6094-6102).

    Abstract

    Recognizing the limitations of standard vision assessments in capturing the real-world capabilities of individuals with low vision, we investigated the potential of the Seguin Form Board Test (SFBT), a widely-used intelligence assessment employing a visuo-haptic shape-fitting task, as an estimator of vision's practical utility. We present findings from 23 children from India, who underwent treatment for congenital bilateral dense cataracts, and 21 control participants. To assess the development of functional visual ability, we conducted the SFBT and the standard measure of visual acuity, before and longitudinally after treatment. We observed a dissociation in the development of shape-fitting and visual acuity. Improvements of patients' shape-fitting preceded enhancements in their visual acuity after surgery and emerged even with acuity worse than that of control participants. Our findings highlight the importance of incorporating multi-modal and cognitive aspects into evaluations of visual proficiency in low-vision conditions, to better reflect vision's impact on daily activities.

    Additional information

    link to eScholarship
  • Emmendorfer, A. K., & Holler, J. (2024). The influence of speaker gaze on addressee response planning: evidence from EEG data. Poster presented at the IMPRS Conference 2024, Nijmegen, the Netherlands.
  • Jansen, M., Zwiers, M., Marques, J., Chan, K.-S., Amelink, J., Altgassen, M., Oosterman, J., & Norris, D. (2024). The Advanced BRain Imaging on ageing and Memory (ABRIM) data collection. Poster presented at the OHBM 2024 Annual Meeting, Seoul, Korea.
  • Zhou, Y., van der Burght, C. L., & Meyer, A. S. (2024). Investigating the role of semantics and perceptual salience in the memory benefit of prosodic prominence. Poster presented at Speech Prosody 2024, Leiden, The Netherlands.
  • Ghaleb, E., Burenko, I., Rasenberg, M., Pouw, W., Uhrig, P., Wilson, A., Toni, I., Holler, J., Özyürek, A., & Fernández, R. (2024). Temporal alignment and integration of audio-visual cues for co-speech gesture detection. Poster presented at the Highlights in the Language Sciences Conference 2024, Nijmegen, The Netherlands.
  • Lupyan, G., & Raviv, L. (2024). A cautionary note on sociodemographic predictors of linguistic complexity: Different measures and different analyses lead to different conclusions. In J. Nölle, L. Raviv, K. E. Graham, S. Hartmann, Y. Jadoul, M. Josserand, T. Matzinger, K. Mudd, M. Pleyer, A. Slonimska, & S. Wacewicz (Eds.), The Evolution of Language: Proceedings of the 15th International Conference (EVOLANG XV) (pp. 345-348). Nijmegen: The Evolution of Language Conferences.
  • Ghaleb, E., Rasenberg, M., Pouw, W., Toni, I., Holler, J., Özyürek, A., & Fernandez, R. (2024). Analysing cross-speaker convergence through the lens of automatically detected shared linguistic constructions. Poster presented at the 46th Annual Meeting of the Cognitive Science Society (CogSci 2024), Rotterdam, The Netherlands.
  • de Reus, K., Benítez-Burraco, A., Hersh, T. A., Groot, N., Lambert, M. L., Slocombe, K. E., Vernes, S. C., & Raviv, L. (2024). Self-domestication traits in vocal learning mammals. In J. Nölle, L. Raviv, K. E. Graham, S. Hartmann, Y. Jadoul, M. Josserand, T. Matzinger, K. Mudd, M. Pleyer, A. Slonimska, & S. Wacewicz (Eds.), The Evolution of Language: Proceedings of the 15th International Conference (EVOLANG XV) (pp. 105-108). Nijmegen: The Evolution of Language Conferences.
  • Frances, C., & Meyer, A. S. (2024). The effect of pitch accents on the interpretation of short exchanges. Poster presented at the 29th Architectures and Mechanisms for Language Processing Conference (AMLaP 2024), Edinburgh, Scotland.

Share this page